Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm25239-201ENSMUST00000174915 86 ntBASIC41,13■■■■■ 4,17
Tnrc18Q80WC3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38,22■■■■□ 3,71
Tnrc18Q80WC3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37,65■■■■□ 3,62
Tnrc18Q80WC3 Gm24109-201ENSMUST00000175489 103 ntBASIC36,09■■■■□ 3,37
Tnrc18Q80WC3 Gm15042-201ENSMUST00000120212 883 ntBASIC35,27■■■■□ 3,24
Tnrc18Q80WC3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34,83■■■■□ 3,17
Tnrc18Q80WC3 Gm15045-201ENSMUST00000117359 883 ntBASIC34,71■■■■□ 3,15
Tnrc18Q80WC3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,62■■■■□ 3,13
Tnrc18Q80WC3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34,4■■■■□ 3,1
Tnrc18Q80WC3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34,36■■■■□ 3,09
Tnrc18Q80WC3 Gm23366-201ENSMUST00000175022 89 ntBASIC34,05■■■■□ 3,04
Tnrc18Q80WC3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33,66■■■□□ 2,98
Tnrc18Q80WC3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33,46■■■□□ 2,95
Tnrc18Q80WC3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33,39■■■□□ 2,94
Tnrc18Q80WC3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33,2■■■□□ 2,91
Tnrc18Q80WC3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33,13■■■□□ 2,89
Tnrc18Q80WC3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33,09■■■□□ 2,89
Tnrc18Q80WC3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32,88■■■□□ 2,85
Tnrc18Q80WC3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32,8■■■□□ 2,84
Tnrc18Q80WC3 Gm25238-201ENSMUST00000174914 89 ntBASIC32,74■■■□□ 2,83
Tnrc18Q80WC3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,68■■■□□ 2,82
Tnrc18Q80WC3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32,62■■■□□ 2,81
Tnrc18Q80WC3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32,57■■■□□ 2,81
Tnrc18Q80WC3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,29■■■□□ 2,76
Tnrc18Q80WC3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31,99■■■□□ 2,71
Tnrc18Q80WC3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31,89■■■□□ 2,7
Tnrc18Q80WC3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31,86■■■□□ 2,69
Tnrc18Q80WC3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31,82■■■□□ 2,68
Tnrc18Q80WC3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Tnrc18Q80WC3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31,72■■■□□ 2,67
Tnrc18Q80WC3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31,59■■■□□ 2,65
Tnrc18Q80WC3 Gm25262-201ENSMUST00000174934 133 ntBASIC31,58■■■□□ 2,65
Tnrc18Q80WC3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31,57■■■□□ 2,64
Tnrc18Q80WC3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,46■■■□□ 2,63
Tnrc18Q80WC3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31,42■■■□□ 2,62
Tnrc18Q80WC3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Tnrc18Q80WC3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31,33■■■□□ 2,61
Tnrc18Q80WC3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31,31■■■□□ 2,6
Tnrc18Q80WC3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31,26■■■□□ 2,59
Tnrc18Q80WC3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31,21■■■□□ 2,59
Tnrc18Q80WC3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31,19■■■□□ 2,58
Tnrc18Q80WC3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,17■■■□□ 2,58
Tnrc18Q80WC3 Gm27325-201ENSMUST00000175467 74 ntBASIC31,04■■■□□ 2,56
Tnrc18Q80WC3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31,03■■■□□ 2,56
Tnrc18Q80WC3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30,97■■■□□ 2,55
Tnrc18Q80WC3 Gm26115-201ENSMUST00000175605 87 ntBASIC30,92■■■□□ 2,54
Tnrc18Q80WC3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30,92■■■□□ 2,54
Tnrc18Q80WC3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30,91■■■□□ 2,54
Tnrc18Q80WC3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30,83■■■□□ 2,53
Tnrc18Q80WC3 Gm8109-201ENSMUST00000194076 746 ntBASIC30,76■■■□□ 2,51
Tnrc18Q80WC3 Rab21-202ENSMUST00000218831 843 ntBASIC30,73■■■□□ 2,51
Tnrc18Q80WC3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Tnrc18Q80WC3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30,66■■■□□ 2,5
Tnrc18Q80WC3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,64■■■□□ 2,5
Tnrc18Q80WC3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,62■■■□□ 2,49
Tnrc18Q80WC3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30,61■■■□□ 2,49
Tnrc18Q80WC3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Tnrc18Q80WC3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,45■■■□□ 2,47
Tnrc18Q80WC3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,42■■■□□ 2,46
Tnrc18Q80WC3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30,38■■■□□ 2,45
Tnrc18Q80WC3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30,35■■■□□ 2,45
Tnrc18Q80WC3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30,34■■■□□ 2,45
Tnrc18Q80WC3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30,31■■■□□ 2,44
Tnrc18Q80WC3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30,3■■■□□ 2,44
Tnrc18Q80WC3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30,18■■■□□ 2,42
Tnrc18Q80WC3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,18■■■□□ 2,42
Tnrc18Q80WC3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,1■■■□□ 2,41
Tnrc18Q80WC3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30,09■■■□□ 2,41
Tnrc18Q80WC3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30,09■■■□□ 2,41
Tnrc18Q80WC3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29,88■■■□□ 2,37
Tnrc18Q80WC3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29,86■■■□□ 2,37
Tnrc18Q80WC3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29,84■■■□□ 2,37
Tnrc18Q80WC3 Gm17082-201ENSMUST00000166043 1091 ntBASIC29,81■■■□□ 2,36
Tnrc18Q80WC3 Gm24804-201ENSMUST00000174982 85 ntBASIC29,8■■■□□ 2,36
Tnrc18Q80WC3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29,78■■■□□ 2,36
Tnrc18Q80WC3 Psd-208ENSMUST00000224556 2034 ntBASIC29,72■■■□□ 2,35
Tnrc18Q80WC3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
Tnrc18Q80WC3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29,71■■■□□ 2,35
Tnrc18Q80WC3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29,67■■■□□ 2,34
Tnrc18Q80WC3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29,67■■■□□ 2,34
Tnrc18Q80WC3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29,64■■■□□ 2,34
Tnrc18Q80WC3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29,62■■■□□ 2,33
Tnrc18Q80WC3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29,57■■■□□ 2,32
Tnrc18Q80WC3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29,53■■■□□ 2,32
Tnrc18Q80WC3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Tnrc18Q80WC3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29,46■■■□□ 2,31
Tnrc18Q80WC3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29,46■■■□□ 2,31
Tnrc18Q80WC3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29,43■■■□□ 2,3
Tnrc18Q80WC3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29,41■■■□□ 2,3
Tnrc18Q80WC3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29,38■■■□□ 2,29
Tnrc18Q80WC3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29,35■■■□□ 2,29
Tnrc18Q80WC3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29,35■■■□□ 2,29
Tnrc18Q80WC3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29,35■■■□□ 2,29
Tnrc18Q80WC3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29,33■■■□□ 2,29
Tnrc18Q80WC3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,32■■■□□ 2,28
Tnrc18Q80WC3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29,32■■■□□ 2,28
Tnrc18Q80WC3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,3■■■□□ 2,28
Tnrc18Q80WC3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29,27■■■□□ 2,28
Tnrc18Q80WC3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29,26■■■□□ 2,28
Tnrc18Q80WC3 Gm27322-201ENSMUST00000184007 104 ntBASIC29,25■■■□□ 2,27
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms