Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Gm25239-201ENSMUST00000174915 86 ntBASIC35,24■■■■□ 3,23
Trank1Q8BV79 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,79■■■□□ 2,84
Trank1Q8BV79 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32,28■■■□□ 2,76
Trank1Q8BV79 Gm24109-201ENSMUST00000175489 103 ntBASIC30,93■■■□□ 2,54
Trank1Q8BV79 Gm15042-201ENSMUST00000120212 883 ntBASIC30,25■■■□□ 2,43
Trank1Q8BV79 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,87■■■□□ 2,37
Trank1Q8BV79 Gm15045-201ENSMUST00000117359 883 ntBASIC29,8■■■□□ 2,36
Trank1Q8BV79 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Trank1Q8BV79 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,58■■■□□ 2,33
Trank1Q8BV79 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,49■■■□□ 2,31
Trank1Q8BV79 Gm23366-201ENSMUST00000175022 89 ntBASIC29,19■■■□□ 2,26
Trank1Q8BV79 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,91■■■□□ 2,22
Trank1Q8BV79 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28,75■■■□□ 2,19
Trank1Q8BV79 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Trank1Q8BV79 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Trank1Q8BV79 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28,44■■■□□ 2,14
Trank1Q8BV79 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Trank1Q8BV79 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28,3■■■□□ 2,12
Trank1Q8BV79 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28,19■■■□□ 2,1
Trank1Q8BV79 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28,14■■■□□ 2,1
Trank1Q8BV79 Gm25238-201ENSMUST00000174914 89 ntBASIC28,1■■■□□ 2,09
Trank1Q8BV79 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27,99■■■□□ 2,07
Trank1Q8BV79 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27,92■■■□□ 2,06
Trank1Q8BV79 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27,92■■■□□ 2,06
Trank1Q8BV79 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27,45■■□□□ 1,99
Trank1Q8BV79 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27,39■■□□□ 1,98
Trank1Q8BV79 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27,36■■□□□ 1,97
Trank1Q8BV79 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27,32■■□□□ 1,96
Trank1Q8BV79 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,29■■□□□ 1,96
Trank1Q8BV79 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27,26■■□□□ 1,96
Trank1Q8BV79 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27,22■■□□□ 1,95
Trank1Q8BV79 Gm25262-201ENSMUST00000174934 133 ntBASIC27,19■■□□□ 1,94
Trank1Q8BV79 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27,14■■□□□ 1,94
Trank1Q8BV79 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,13■■□□□ 1,93
Trank1Q8BV79 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,07■■□□□ 1,92
Trank1Q8BV79 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27,04■■□□□ 1,92
Trank1Q8BV79 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26,97■■□□□ 1,91
Trank1Q8BV79 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26,88■■□□□ 1,89
Trank1Q8BV79 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26,86■■□□□ 1,89
Trank1Q8BV79 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26,83■■□□□ 1,89
Trank1Q8BV79 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,75■■□□□ 1,87
Trank1Q8BV79 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26,68■■□□□ 1,86
Trank1Q8BV79 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26,66■■□□□ 1,86
Trank1Q8BV79 Gm27325-201ENSMUST00000175467 74 ntBASIC26,63■■□□□ 1,85
Trank1Q8BV79 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26,62■■□□□ 1,85
Trank1Q8BV79 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26,61■■□□□ 1,85
Trank1Q8BV79 Gm26115-201ENSMUST00000175605 87 ntBASIC26,59■■□□□ 1,85
Trank1Q8BV79 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,84
Trank1Q8BV79 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26,45■■□□□ 1,82
Trank1Q8BV79 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Trank1Q8BV79 Gm8109-201ENSMUST00000194076 746 ntBASIC26,41■■□□□ 1,82
Trank1Q8BV79 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26,41■■□□□ 1,82
Trank1Q8BV79 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Trank1Q8BV79 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Trank1Q8BV79 Rab21-202ENSMUST00000218831 843 ntBASIC26,34■■□□□ 1,81
Trank1Q8BV79 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,3■■□□□ 1,8
Trank1Q8BV79 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26,27■■□□□ 1,8
Trank1Q8BV79 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26,25■■□□□ 1,79
Trank1Q8BV79 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26,14■■□□□ 1,77
Trank1Q8BV79 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,12■■□□□ 1,77
Trank1Q8BV79 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,1■■□□□ 1,77
Trank1Q8BV79 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,04■■□□□ 1,76
Trank1Q8BV79 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26,03■■□□□ 1,76
Trank1Q8BV79 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,01■■□□□ 1,75
Trank1Q8BV79 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Trank1Q8BV79 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25,91■■□□□ 1,74
Trank1Q8BV79 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25,91■■□□□ 1,74
Trank1Q8BV79 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25,89■■□□□ 1,73
Trank1Q8BV79 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,78■■□□□ 1,72
Trank1Q8BV79 Psd-208ENSMUST00000224556 2034 ntBASIC25,78■■□□□ 1,72
Trank1Q8BV79 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,7■■□□□ 1,7
Trank1Q8BV79 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25,68■■□□□ 1,7
Trank1Q8BV79 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25,65■■□□□ 1,7
Trank1Q8BV79 Gm24804-201ENSMUST00000174982 85 ntBASIC25,64■■□□□ 1,69
Trank1Q8BV79 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25,59■■□□□ 1,69
Trank1Q8BV79 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,59■■□□□ 1,69
Trank1Q8BV79 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Trank1Q8BV79 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,5■■□□□ 1,67
Trank1Q8BV79 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Trank1Q8BV79 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Trank1Q8BV79 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Trank1Q8BV79 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25,47■■□□□ 1,67
Trank1Q8BV79 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25,39■■□□□ 1,66
Trank1Q8BV79 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25,38■■□□□ 1,65
Trank1Q8BV79 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25,34■■□□□ 1,65
Trank1Q8BV79 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25,33■■□□□ 1,65
Trank1Q8BV79 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25,28■■□□□ 1,64
Trank1Q8BV79 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25,26■■□□□ 1,63
Trank1Q8BV79 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25,23■■□□□ 1,63
Trank1Q8BV79 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Trank1Q8BV79 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,2■■□□□ 1,63
Trank1Q8BV79 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25,2■■□□□ 1,62
Trank1Q8BV79 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25,18■■□□□ 1,62
Trank1Q8BV79 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25,18■■□□□ 1,62
Trank1Q8BV79 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Trank1Q8BV79 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25,14■■□□□ 1,62
Trank1Q8BV79 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25,13■■□□□ 1,61
Trank1Q8BV79 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25,12■■□□□ 1,61
Trank1Q8BV79 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25,12■■□□□ 1,61
Trank1Q8BV79 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25,12■■□□□ 1,61
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms