Protein–RNA interactions for Protein: P60603

Romo1, Reactive oxygen species modulator 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Romo1P60603 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Romo1P60603 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Romo1P60603 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Romo1P60603 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Romo1P60603 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Romo1P60603 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Romo1P60603 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC15□□□□□ -0.01
Romo1P60603 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Romo1P60603 Psd-208ENSMUST00000224556 2034 ntBASIC14.9□□□□□ -0.02
Romo1P60603 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Romo1P60603 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Romo1P60603 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Romo1P60603 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Romo1P60603 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Romo1P60603 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Romo1P60603 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Romo1P60603 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Romo1P60603 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Romo1P60603 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Romo1P60603 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Romo1P60603 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Romo1P60603 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Romo1P60603 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Romo1P60603 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC14.15□□□□□ -0.14
Romo1P60603 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Romo1P60603 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Romo1P60603 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Romo1P60603 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC14.02□□□□□ -0.16
Romo1P60603 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Romo1P60603 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Romo1P60603 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Romo1P60603 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Romo1P60603 Gm42596-201ENSMUST00000196305 1958 ntBASIC13.94□□□□□ -0.18
Romo1P60603 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Romo1P60603 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Romo1P60603 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Romo1P60603 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Romo1P60603 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Romo1P60603 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Romo1P60603 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Romo1P60603 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Romo1P60603 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Romo1P60603 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Romo1P60603 Zxda-201ENSMUST00000117281 2621 ntBASIC13.69□□□□□ -0.22
Romo1P60603 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Romo1P60603 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Romo1P60603 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Romo1P60603 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Romo1P60603 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Romo1P60603 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Romo1P60603 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Romo1P60603 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Romo1P60603 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Romo1P60603 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Romo1P60603 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Romo1P60603 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Romo1P60603 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Romo1P60603 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Romo1P60603 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Romo1P60603 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC13.41□□□□□ -0.26
Romo1P60603 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Romo1P60603 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Romo1P60603 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Romo1P60603 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Romo1P60603 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Romo1P60603 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Romo1P60603 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Romo1P60603 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Romo1P60603 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC13.31□□□□□ -0.28
Romo1P60603 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC13.3□□□□□ -0.28
Romo1P60603 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Romo1P60603 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Romo1P60603 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Romo1P60603 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Romo1P60603 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Romo1P60603 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Romo1P60603 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Romo1P60603 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Romo1P60603 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Romo1P60603 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Romo1P60603 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Romo1P60603 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Romo1P60603 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Romo1P60603 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Romo1P60603 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Romo1P60603 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Romo1P60603 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Romo1P60603 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Romo1P60603 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Romo1P60603 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Romo1P60603 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Romo1P60603 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Romo1P60603 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC13.1□□□□□ -0.31
Romo1P60603 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Romo1P60603 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Romo1P60603 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Romo1P60603 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Romo1P60603 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Romo1P60603 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Romo1P60603 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms