Protein–RNA interactions for Protein: Q8R526

Pkd1l1, Polycystic kidney disease protein 1-like 1, mousemouse

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l1Q8R526 Gm25239-201ENSMUST00000174915 86 ntBASIC29.88■■■□□ 2.37
Pkd1l1Q8R526 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Pkd1l1Q8R526 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pkd1l1Q8R526 Gm24109-201ENSMUST00000175489 103 ntBASIC26.37■■□□□ 1.81
Pkd1l1Q8R526 Gm15042-201ENSMUST00000120212 883 ntBASIC25.3■■□□□ 1.64
Pkd1l1Q8R526 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pkd1l1Q8R526 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pkd1l1Q8R526 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pkd1l1Q8R526 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pkd1l1Q8R526 Gm15045-201ENSMUST00000117359 883 ntBASIC24.71■■□□□ 1.55
Pkd1l1Q8R526 Gm23366-201ENSMUST00000175022 89 ntBASIC24.68■■□□□ 1.54
Pkd1l1Q8R526 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.67■■□□□ 1.54
Pkd1l1Q8R526 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pkd1l1Q8R526 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pkd1l1Q8R526 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
Pkd1l1Q8R526 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.48■■□□□ 1.51
Pkd1l1Q8R526 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pkd1l1Q8R526 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.97■■□□□ 1.43
Pkd1l1Q8R526 Gm25238-201ENSMUST00000174914 89 ntBASIC23.81■■□□□ 1.4
Pkd1l1Q8R526 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pkd1l1Q8R526 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pkd1l1Q8R526 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.34
Pkd1l1Q8R526 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Pkd1l1Q8R526 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pkd1l1Q8R526 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
Pkd1l1Q8R526 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Pkd1l1Q8R526 Gm25262-201ENSMUST00000174934 133 ntBASIC23.18■■□□□ 1.3
Pkd1l1Q8R526 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.99■■□□□ 1.27
Pkd1l1Q8R526 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.93■■□□□ 1.26
Pkd1l1Q8R526 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
Pkd1l1Q8R526 Gm26115-201ENSMUST00000175605 87 ntBASIC22.82■■□□□ 1.24
Pkd1l1Q8R526 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.79■■□□□ 1.24
Pkd1l1Q8R526 Gm8109-201ENSMUST00000194076 746 ntBASIC22.64■■□□□ 1.22
Pkd1l1Q8R526 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pkd1l1Q8R526 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pkd1l1Q8R526 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.59■■□□□ 1.21
Pkd1l1Q8R526 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pkd1l1Q8R526 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.47■■□□□ 1.19
Pkd1l1Q8R526 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.45■■□□□ 1.18
Pkd1l1Q8R526 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.37■■□□□ 1.17
Pkd1l1Q8R526 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pkd1l1Q8R526 Rab21-202ENSMUST00000218831 843 ntBASIC22.21■■□□□ 1.15
Pkd1l1Q8R526 Gm27325-201ENSMUST00000175467 74 ntBASIC22.16■■□□□ 1.14
Pkd1l1Q8R526 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pkd1l1Q8R526 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pkd1l1Q8R526 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pkd1l1Q8R526 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pkd1l1Q8R526 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.06■■□□□ 1.12
Pkd1l1Q8R526 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pkd1l1Q8R526 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pkd1l1Q8R526 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pkd1l1Q8R526 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pkd1l1Q8R526 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.91■■□□□ 1.1
Pkd1l1Q8R526 Gm24804-201ENSMUST00000174982 85 ntBASIC21.88■■□□□ 1.09
Pkd1l1Q8R526 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pkd1l1Q8R526 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.86■■□□□ 1.09
Pkd1l1Q8R526 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pkd1l1Q8R526 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pkd1l1Q8R526 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.82■■□□□ 1.08
Pkd1l1Q8R526 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Pkd1l1Q8R526 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pkd1l1Q8R526 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pkd1l1Q8R526 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pkd1l1Q8R526 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pkd1l1Q8R526 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.67■■□□□ 1.06
Pkd1l1Q8R526 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pkd1l1Q8R526 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pkd1l1Q8R526 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.64■■□□□ 1.06
Pkd1l1Q8R526 Zfp131-205ENSMUST00000223812 663 ntBASIC21.64■■□□□ 1.05
Pkd1l1Q8R526 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.63■■□□□ 1.05
Pkd1l1Q8R526 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.63■■□□□ 1.05
Pkd1l1Q8R526 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pkd1l1Q8R526 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pkd1l1Q8R526 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pkd1l1Q8R526 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.53■■□□□ 1.04
Pkd1l1Q8R526 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pkd1l1Q8R526 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pkd1l1Q8R526 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pkd1l1Q8R526 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pkd1l1Q8R526 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pkd1l1Q8R526 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pkd1l1Q8R526 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pkd1l1Q8R526 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pkd1l1Q8R526 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.29■■□□□ 1
Pkd1l1Q8R526 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Pkd1l1Q8R526 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.28■■□□□ 1
Pkd1l1Q8R526 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pkd1l1Q8R526 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.26■□□□□ 0.99
Pkd1l1Q8R526 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pkd1l1Q8R526 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.25■□□□□ 0.99
Pkd1l1Q8R526 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.21■□□□□ 0.99
Pkd1l1Q8R526 Gm27322-201ENSMUST00000184007 104 ntBASIC21.21■□□□□ 0.99
Pkd1l1Q8R526 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pkd1l1Q8R526 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pkd1l1Q8R526 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.18■□□□□ 0.98
Pkd1l1Q8R526 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.15■□□□□ 0.98
Pkd1l1Q8R526 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pkd1l1Q8R526 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pkd1l1Q8R526 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.06■□□□□ 0.96
Pkd1l1Q8R526 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms