RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Gm9195A0A140LHT4 2805 aa4.29□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Ep400Q8CHI8 3072 aaKnown RBP4.28□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Nsd1O88491 2588 aaKnown RBP4.28□□□□□ -1.72
Scn1a-202ENSMUST00000094951 Camk2n1Q6QWF9 78 aa4.27□□□□□ -1.73
Scn1a-202ENSMUST00000094951 Mast4Q811L6 2618 aa4.27□□□□□ -1.73
Scn1a-202ENSMUST00000094951 Stab1Q8R4Y4 2571 aa4.27□□□□□ -1.73
Scn1a-202ENSMUST00000094951 2310050C09RikG5E8Z3 280 aa4.26□□□□□ -1.73
Scn1a-202ENSMUST00000094951 Fam229bQ8CF36 80 aa4.25□□□□□ -1.73
Scn1a-202ENSMUST00000094951 BC029722A0A0N4SW31 51 aa4.25□□□□□ -1.73
Scn1a-202ENSMUST00000094951 Tnp2P11378 117 aa4.23□□□□□ -1.73
Scn1a-202ENSMUST00000094951 Smim29Q8R043 75 aa4.21□□□□□ -1.74
Scn1a-202ENSMUST00000094951 Tep1P97499 2629 aa4.2□□□□□ -1.74
Scn1a-202ENSMUST00000094951 Krtap13O88375 197 aa4.19□□□□□ -1.74
Scn1a-202ENSMUST00000094951 D6Ertd527eA0A0N4SWI3 464 aa4.18□□□□□ -1.74
Scn1a-202ENSMUST00000094951 2310061N02RikQ9D6S9 174 aa4.17□□□□□ -1.74
Scn1a-202ENSMUST00000094951 Myo15bI7HPW8 3033 aa4.16□□□□□ -1.74
Scn1a-202ENSMUST00000094951 Dmbt1Q60997 2085 aa4.16□□□□□ -1.74
Scn1a-202ENSMUST00000094951 Gm42715A0A087WP63 3095 aaKnown RBP4.15□□□□□ -1.74
Scn1a-202ENSMUST00000094951 Gm2310J3QNJ2 377 aa4.15□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Cystm1Q8K353 104 aa4.15□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Lama3Q61789 3330 aa4.14□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Gm3880A0A1B0GSB3 72 aa4.14□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Itpr3P70227 2670 aa4.14□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Itpr1P11881 2749 aa4.14□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Rpl37Q9D823 97 aa4.13□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Gcn1E9PVA8 2671 aaKnown RBP4.11□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Usp34Q6ZQ93 3582 aa4.11□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Cep350E9Q309 3095 aa4.11□□□□□ -1.75
Scn1a-202ENSMUST00000094951 9530053A07RikE9PVG8 2581 aa4.11□□□□□ -1.75
Scn1a-202ENSMUST00000094951 A930033H14RikG5E8X6 103 aa4.1□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Gm37013Q8K491 104 aa4.1□□□□□ -1.75
Scn1a-202ENSMUST00000094951 Krtap14O08640 167 aa4.1□□□□□ -1.75
Scn1a-202ENSMUST00000094951 NipblQ6KCD5 2798 aaKnown RBP4.08□□□□□ -1.76
Scn1a-202ENSMUST00000094951 A730071L15RikQ8C4X0 137 aa4.08□□□□□ -1.76
Scn1a-202ENSMUST00000094951 CenpfE9Q3P4 2997 aaKnown RBP4.08□□□□□ -1.76
Scn1a-202ENSMUST00000094951 Dnah12Q3V0Q1 3086 aa4.07□□□□□ -1.76
Scn1a-202ENSMUST00000094951 TrioQ0KL02 3102 aa4.07□□□□□ -1.76
Scn1a-202ENSMUST00000094951 Gm9507D3Z5T3 223 aa4.05□□□□□ -1.76
Scn1a-202ENSMUST00000094951 Kmt2bO08550 2713 aa4.05□□□□□ -1.76
Scn1a-202ENSMUST00000094951 1700042G07RikB1AUF7 90 aa4.03□□□□□ -1.76
Scn1a-202ENSMUST00000094951 PcntP48725 2898 aa4.02□□□□□ -1.77
Scn1a-202ENSMUST00000094951 Stab2Q8R4U0 2559 aa4.02□□□□□ -1.77
Scn1a-202ENSMUST00000094951 Chd6A3KFM7 2711 aa4.02□□□□□ -1.77
Scn1a-202ENSMUST00000094951 Gm9508A0A1W2P7W0 230 aa4.01□□□□□ -1.77
Scn1a-202ENSMUST00000094951 Gm3646F6S692 53 aa4.01□□□□□ -1.77
Scn1a-202ENSMUST00000094951 Romo1P60603 79 aa4□□□□□ -1.77
Scn1a-202ENSMUST00000094951 FcgbpE9Q0B5 2583 aa4□□□□□ -1.77
Scn1a-202ENSMUST00000094951 Tnrc18Q80WC3 2878 aa3.99□□□□□ -1.77
Scn1a-202ENSMUST00000094951 Krtap10-10A0A1W2P7T6 217 aa3.99□□□□□ -1.77
Scn1a-202ENSMUST00000094951 Col6a5A6H584 2640 aa3.98□□□□□ -1.77
Scn1a-202ENSMUST00000094951 Cox6b2Q80ZN9 88 aa3.96□□□□□ -1.78
Scn1a-202ENSMUST00000094951 Jbts17Q8CE72 3214 aa3.94□□□□□ -1.78
Scn1a-202ENSMUST00000094951 Itpr2Q9Z329 2701 aa3.94□□□□□ -1.78
Scn1a-202ENSMUST00000094951 Pkd1l1Q8R526 2615 aa3.94□□□□□ -1.78
Scn1a-202ENSMUST00000094951 Tenm4Q3UHK6 2771 aa3.94□□□□□ -1.78
Scn1a-202ENSMUST00000094951 Mki67E9PVX6 3177 aaKnown RBP3.93□□□□□ -1.78
Scn1a-202ENSMUST00000094951 Cdh23Q99PF4 3354 aa3.92□□□□□ -1.78
Scn1a-202ENSMUST00000094951 4933415A04RikQ9D443 101 aa3.92□□□□□ -1.78
Scn1a-202ENSMUST00000094951 Krtap10-4Q08EG8 221 aa3.91□□□□□ -1.78
Scn1a-202ENSMUST00000094951 Gm10382Q3V0T5 144 aa3.91□□□□□ -1.78
Scn1a-202ENSMUST00000094951 Map1aQ9QYR6 2776 aa3.91□□□□□ -1.78
Scn1a-202ENSMUST00000094951 Unc80Q8BLN6 3261 aa3.9□□□□□ -1.79
Scn1a-202ENSMUST00000094951 Muc2Q80Z19 2680 aa3.89□□□□□ -1.79
Scn1a-202ENSMUST00000094951 Lama2Q60675 3118 aaKnown RBP3.88□□□□□ -1.79
Scn1a-202ENSMUST00000094951 Hivep1Q03172 2688 aa3.88□□□□□ -1.79
Scn1a-202ENSMUST00000094951 Cfap54Q8C6S9 3106 aa3.87□□□□□ -1.79
Scn1a-202ENSMUST00000094951 Gm11939A2A592 99 aa3.85□□□□□ -1.79
Scn1a-202ENSMUST00000094951 Nbeal2Q6ZQA0 2742 aa3.85□□□□□ -1.79
Scn1a-202ENSMUST00000094951 Ubr5Q80TP3 2792 aa3.85□□□□□ -1.79
Scn1a-202ENSMUST00000094951 HttP42859 3119 aa3.85□□□□□ -1.79
Scn1a-202ENSMUST00000094951 HrnrQ8VHD8 2496 aa3.85□□□□□ -1.79
Scn1a-202ENSMUST00000094951 Gm2696A0A1W2P709 240 aa3.84□□□□□ -1.79
Scn1a-202ENSMUST00000094951 Gm5965D3Z724 196 aa3.83□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Gm21887J3QQ04 176 aa3.83□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Col12a1Q60847 3120 aa3.82□□□□□ -1.8
Scn1a-202ENSMUST00000094951 MgaA2AWL7 3003 aaKnown RBP3.82□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Vps13aQ5H8C4 3166 aa3.82□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Igfn1Q3KNY0 2849 aa3.81□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Gm17416Q30KP4 66 aa3.8□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Szt2A2A9C3 3431 aa3.8□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Prune2Q52KR3 3084 aa3.79□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Chd7A2AJK6 2986 aaKnown RBP3.79□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Gm7173A0A0G2JEB6 3132 aa3.79□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Rev3lQ61493 3122 aa3.78□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Tnp1P10856 55 aa3.78□□□□□ -1.8
Scn1a-202ENSMUST00000094951 Ranbp2Q9ERU9 3053 aaKnown RBP3.77□□□□□ -1.81
Scn1a-202ENSMUST00000094951 Prrc2cQ3TLH4 2846 aaKnown RBP3.77□□□□□ -1.81
Scn1a-202ENSMUST00000094951 2310057N15RikQ9D6T8 200 aa3.76□□□□□ -1.81
Scn1a-202ENSMUST00000094951 Bod1lE9Q6J5 3032 aa3.75□□□□□ -1.81
Scn1a-202ENSMUST00000094951 Gm40193A0A1B0GT39 78 aa3.74□□□□□ -1.81
Scn1a-202ENSMUST00000094951 Frem2Q6NVD0 3160 aa3.73□□□□□ -1.81
Scn1a-202ENSMUST00000094951 Celsr3Q91ZI0 3301 aa3.73□□□□□ -1.81
Scn1a-202ENSMUST00000094951 AtmQ62388 3066 aa3.73□□□□□ -1.81
Scn1a-202ENSMUST00000094951 Brca2P97929 3329 aa3.71□□□□□ -1.81
Scn1a-202ENSMUST00000094951 Prm2P07978 107 aa3.71□□□□□ -1.81
Scn1a-202ENSMUST00000094951 Col6a3E9PWQ3 3284 aa3.68□□□□□ -1.82
Scn1a-202ENSMUST00000094951 Gm17402F6Z0L5 76 aa3.67□□□□□ -1.82
Scn1a-202ENSMUST00000094951 FlncQ8VHX6 2726 aaKnown RBP3.66□□□□□ -1.82
Scn1a-202ENSMUST00000094951 Fbn2Q61555 2907 aa3.65□□□□□ -1.83
Scn1a-202ENSMUST00000094951 2210017I01RikA0A0A6YVV1 95 aa3.64□□□□□ -1.83
Retrieved 100 of 22,080 RNA–protein pairs in 99 ms