Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3880A0A1B0GSB3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3880A0A1B0GSB3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Gm3880A0A1B0GSB3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3880A0A1B0GSB3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Gm3880A0A1B0GSB3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gm3880A0A1B0GSB3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3880A0A1B0GSB3 Psd-208ENSMUST00000224556 2034 ntBASIC15.55■□□□□ 0.08
Gm3880A0A1B0GSB3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm3880A0A1B0GSB3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm3880A0A1B0GSB3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm3880A0A1B0GSB3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm3880A0A1B0GSB3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm3880A0A1B0GSB3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Gm3880A0A1B0GSB3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC14.95□□□□□ -0.02
Gm3880A0A1B0GSB3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Gm3880A0A1B0GSB3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm3880A0A1B0GSB3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3880A0A1B0GSB3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm3880A0A1B0GSB3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm3880A0A1B0GSB3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3880A0A1B0GSB3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm3880A0A1B0GSB3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3880A0A1B0GSB3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Gm3880A0A1B0GSB3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Gm3880A0A1B0GSB3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm3880A0A1B0GSB3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm3880A0A1B0GSB3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm3880A0A1B0GSB3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3880A0A1B0GSB3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3880A0A1B0GSB3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3880A0A1B0GSB3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm3880A0A1B0GSB3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3880A0A1B0GSB3 Gm42596-201ENSMUST00000196305 1958 ntBASIC14.47□□□□□ -0.09
Gm3880A0A1B0GSB3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3880A0A1B0GSB3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3880A0A1B0GSB3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3880A0A1B0GSB3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3880A0A1B0GSB3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm3880A0A1B0GSB3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3880A0A1B0GSB3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3880A0A1B0GSB3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3880A0A1B0GSB3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm3880A0A1B0GSB3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3880A0A1B0GSB3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3880A0A1B0GSB3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm3880A0A1B0GSB3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Gm3880A0A1B0GSB3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm3880A0A1B0GSB3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3880A0A1B0GSB3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3880A0A1B0GSB3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3880A0A1B0GSB3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3880A0A1B0GSB3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3880A0A1B0GSB3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm3880A0A1B0GSB3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3880A0A1B0GSB3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3880A0A1B0GSB3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3880A0A1B0GSB3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm3880A0A1B0GSB3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm3880A0A1B0GSB3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC13.94□□□□□ -0.18
Gm3880A0A1B0GSB3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm3880A0A1B0GSB3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC13.92□□□□□ -0.18
Gm3880A0A1B0GSB3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gm3880A0A1B0GSB3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gm3880A0A1B0GSB3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Gm3880A0A1B0GSB3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm3880A0A1B0GSB3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC13.89□□□□□ -0.19
Gm3880A0A1B0GSB3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm3880A0A1B0GSB3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm3880A0A1B0GSB3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm3880A0A1B0GSB3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm3880A0A1B0GSB3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Gm3880A0A1B0GSB3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm3880A0A1B0GSB3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm3880A0A1B0GSB3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm3880A0A1B0GSB3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm3880A0A1B0GSB3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3880A0A1B0GSB3 Zxda-201ENSMUST00000117281 2621 ntBASIC13.84□□□□□ -0.19
Gm3880A0A1B0GSB3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3880A0A1B0GSB3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Gm3880A0A1B0GSB3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3880A0A1B0GSB3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3880A0A1B0GSB3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3880A0A1B0GSB3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3880A0A1B0GSB3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gm3880A0A1B0GSB3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3880A0A1B0GSB3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gm3880A0A1B0GSB3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Gm3880A0A1B0GSB3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm3880A0A1B0GSB3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm3880A0A1B0GSB3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm3880A0A1B0GSB3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm3880A0A1B0GSB3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm3880A0A1B0GSB3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3880A0A1B0GSB3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3880A0A1B0GSB3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3880A0A1B0GSB3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gm3880A0A1B0GSB3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gm3880A0A1B0GSB3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3880A0A1B0GSB3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms