RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Rhox8Q6VSS7 320 aa12.69□□□□□ -0.38
Scn1a-202ENSMUST00000094951 Esf1Q3V1V3 845 aaKnown RBP11.56□□□□□ -0.56
Scn1a-202ENSMUST00000094951 NischQ80TM9 1593 aa11.47□□□□□ -0.57
Scn1a-202ENSMUST00000094951 Trim41Q5NCC3 630 aa11.38□□□□□ -0.59
Scn1a-202ENSMUST00000094951 Zeb1Q64318 1117 aa11.31□□□□□ -0.6
Scn1a-202ENSMUST00000094951 Cngb1E1AZ71 1325 aa11.23□□□□□ -0.61
Scn1a-202ENSMUST00000094951 Npm2Q80W85 207 aa11.16□□□□□ -0.62
Scn1a-202ENSMUST00000094951 Ccdc136Q3TVA9 1136 aa11.1□□□□□ -0.63
Scn1a-202ENSMUST00000094951 Rpgrip1Q9EPQ2 1331 aa11.07□□□□□ -0.64
Scn1a-202ENSMUST00000094951 Ube2uB1AUC4 352 aa11.02□□□□□ -0.65
Scn1a-202ENSMUST00000094951 Abcc9P70170 1546 aa10.98□□□□□ -0.65
Scn1a-202ENSMUST00000094951 Myt1lP97500 1187 aa10.77□□□□□ -0.69
Scn1a-202ENSMUST00000094951 Las1lA2BE28 776 aaKnown RBP10.74□□□□□ -0.69
Scn1a-202ENSMUST00000094951 Il27Q8K3I6 234 aa10.73□□□□□ -0.69
Scn1a-202ENSMUST00000094951 Gab3Q8BSM5 595 aa10.72□□□□□ -0.69
Scn1a-202ENSMUST00000094951 Zcchc6Q5BLK4 1491 aaKnown RBP10.72□□□□□ -0.69
Scn1a-202ENSMUST00000094951 Npm1Q61937 292 aaKnown RBP10.71□□□□□ -0.69
Scn1a-202ENSMUST00000094951 Gm35339A0A140LHH9 1649 aa10.65□□□□□ -0.7
Scn1a-202ENSMUST00000094951 NclP09405 707 aaKnown RBP10.54□□□□□ -0.72
Scn1a-202ENSMUST00000094951 Hdac5Q9Z2V6 1113 aa10.52□□□□□ -0.73
Scn1a-202ENSMUST00000094951 Abcc8B2RUS7 1588 aa10.5□□□□□ -0.73
Scn1a-202ENSMUST00000094951 Ttbk1Q6PCN3 1308 aa10.49□□□□□ -0.73
Scn1a-202ENSMUST00000094951 Ehmt2Q9Z148 1263 aaKnown RBP10.45□□□□□ -0.74
Scn1a-202ENSMUST00000094951 Gm13697A2AK42 830 aa10.43□□□□□ -0.74
Scn1a-202ENSMUST00000094951 Pelp1Q9DBD5 1123 aaKnown RBP10.43□□□□□ -0.74
Scn1a-202ENSMUST00000094951 HrcG5E8J6 738 aa10.41□□□□□ -0.74
Scn1a-202ENSMUST00000094951 Anp32bQ9EST5 272 aaKnown RBP10.41□□□□□ -0.74
Scn1a-202ENSMUST00000094951 Ubl4bQ9CQ84 188 aa10.4□□□□□ -0.74
Scn1a-202ENSMUST00000094951 Wdr66E9Q743 1299 aa10.4□□□□□ -0.74
Scn1a-202ENSMUST00000094951 Rtl1Q7M732 1744 aa10.4□□□□□ -0.75
Scn1a-202ENSMUST00000094951 Brd4Q9ESU6 1400 aaKnown RBP10.37□□□□□ -0.75
Scn1a-202ENSMUST00000094951 Os9Q8K2C7 672 aa10.35□□□□□ -0.75
Scn1a-202ENSMUST00000094951 Ccdc180J3QNE4 1664 aa10.35□□□□□ -0.75
Scn1a-202ENSMUST00000094951 Ercc6F8VPZ5 1481 aa10.34□□□□□ -0.75
Scn1a-202ENSMUST00000094951 Stra8P70278 393 aa10.34□□□□□ -0.75
Scn1a-202ENSMUST00000094951 NacadQ5SWP3 1504 aa10.33□□□□□ -0.76
Scn1a-202ENSMUST00000094951 NefmP08553 848 aa10.29□□□□□ -0.76
Scn1a-202ENSMUST00000094951 Cdk11bP24788 784 aaKnown RBP10.23□□□□□ -0.77
Scn1a-202ENSMUST00000094951 Rb1cc1Q9ESK9 1588 aa10.22□□□□□ -0.77
Scn1a-202ENSMUST00000094951 UbtfP25976 765 aaKnown RBP10.22□□□□□ -0.77
Scn1a-202ENSMUST00000094951 Fam50aQ9WV03 339 aaKnown RBP10.19□□□□□ -0.78
Scn1a-202ENSMUST00000094951 Gm13695A2AK44 830 aa10.19□□□□□ -0.78
Scn1a-202ENSMUST00000094951 Safb2Q80YR5 991 aaKnown RBP10.19□□□□□ -0.78
Scn1a-202ENSMUST00000094951 Ifnlr1Q8CGK5 535 aa10.17□□□□□ -0.78
Scn1a-202ENSMUST00000094951 Pds5bQ4VA53 1446 aaKnown RBP10.15□□□□□ -0.78
Scn1a-202ENSMUST00000094951 Rsf1E9PWW9 1441 aaKnown RBP10.14□□□□□ -0.79
Scn1a-202ENSMUST00000094951 Ap3b1Q9Z1T1 1105 aa10.13□□□□□ -0.79
Scn1a-202ENSMUST00000094951 Hnrnpul2Q00PI9 745 aaKnown RBP10.11□□□□□ -0.79
Scn1a-202ENSMUST00000094951 Clstn2Q9ER65 966 aa10.1□□□□□ -0.79
Scn1a-202ENSMUST00000094951 Cep164Q5DU05 1446 aa10.08□□□□□ -0.8
Scn1a-202ENSMUST00000094951 Acin1Q9JIX8 1338 aaKnown RBP10.08□□□□□ -0.8
Scn1a-202ENSMUST00000094951 Ccdc18Q640L5 1455 aa10.06□□□□□ -0.8
Scn1a-202ENSMUST00000094951 Atp1b4Q99ME6 356 aa10.04□□□□□ -0.8
Scn1a-202ENSMUST00000094951 NrdcQ8BHG1 1161 aa10.03□□□□□ -0.8
Scn1a-202ENSMUST00000094951 DiexfQ8BTT6 772 aaKnown RBP10.01□□□□□ -0.81
Scn1a-202ENSMUST00000094951 Fkbp15Q6P9Q6 1216 aaKnown RBP10□□□□□ -0.81
Scn1a-202ENSMUST00000094951 Kif15Q6P9L6 1387 aa9.99□□□□□ -0.81
Scn1a-202ENSMUST00000094951 Ccer2J3QPU5 274 aa9.99□□□□□ -0.81
Scn1a-202ENSMUST00000094951 Plppr3Q7TPB0 716 aa9.98□□□□□ -0.81
Scn1a-202ENSMUST00000094951 CenpbP27790 599 aa9.98□□□□□ -0.81
Scn1a-202ENSMUST00000094951 Slc24a1Q91WD8 1130 aa9.97□□□□□ -0.81
Scn1a-202ENSMUST00000094951 Erich6D3Z6S9 713 aa9.94□□□□□ -0.82
Scn1a-202ENSMUST00000094951 Neurod1Q60867 357 aa9.94□□□□□ -0.82
Scn1a-202ENSMUST00000094951 Lmod2Q3UHZ5 550 aa9.93□□□□□ -0.82
Scn1a-202ENSMUST00000094951 Dcaf1Q80TR8 1506 aa9.93□□□□□ -0.82
Scn1a-202ENSMUST00000094951 NeflP08551 543 aa9.91□□□□□ -0.82
Scn1a-202ENSMUST00000094951 Rsph4aQ8BYM7 716 aa9.91□□□□□ -0.82
Scn1a-202ENSMUST00000094951 Baz1aO88379 1555 aa9.91□□□□□ -0.82
Scn1a-202ENSMUST00000094951 Zbtb7cQ8VCZ7 619 aa9.9□□□□□ -0.82
Scn1a-202ENSMUST00000094951 Zfp777B9EKF4 885 aa9.86□□□□□ -0.83
Scn1a-202ENSMUST00000094951 Ppp1r18Q8BQ30 594 aa9.84□□□□□ -0.83
Scn1a-202ENSMUST00000094951 Clip1Q922J3 1391 aa9.82□□□□□ -0.84
Scn1a-202ENSMUST00000094951 Phldb1Q6PDH0 1371 aaKnown RBP9.82□□□□□ -0.84
Scn1a-202ENSMUST00000094951 Kdm5dQ62240 1548 aa9.79□□□□□ -0.84
Scn1a-202ENSMUST00000094951 Nlrp6Q91WS2 869 aa9.78□□□□□ -0.84
Scn1a-202ENSMUST00000094951 Tnnt3Q9QZ47 272 aa9.78□□□□□ -0.84
Scn1a-202ENSMUST00000094951 Arhgap27A2AB59 869 aa9.78□□□□□ -0.84
Scn1a-202ENSMUST00000094951 MyclP10166 368 aa9.77□□□□□ -0.85
Scn1a-202ENSMUST00000094951 Chic1Q8CBW7 227 aa9.76□□□□□ -0.85
Scn1a-202ENSMUST00000094951 TonslQ6NZL6 1363 aa9.75□□□□□ -0.85
Scn1a-202ENSMUST00000094951 Atad2bE9Q166 1460 aaKnown RBP9.73□□□□□ -0.85
Scn1a-202ENSMUST00000094951 Golga3P55937 1487 aa9.73□□□□□ -0.85
Scn1a-202ENSMUST00000094951 Pabpn1Q8CCS6 302 aaKnown RBP9.73□□□□□ -0.85
Scn1a-202ENSMUST00000094951 Amer1Q7TS75 1132 aa9.72□□□□□ -0.85
Scn1a-202ENSMUST00000094951 Sycp2Q9CUU3 1500 aa9.72□□□□□ -0.85
Scn1a-202ENSMUST00000094951 IqubQ8CDK3 788 aa9.72□□□□□ -0.85
Scn1a-202ENSMUST00000094951 Plekhg3Q4VAC9 1341 aa9.7□□□□□ -0.86
Scn1a-202ENSMUST00000094951 Eif5bQ05D44 1216 aaKnown RBP9.69□□□□□ -0.86
Scn1a-202ENSMUST00000094951 Crybg2B7ZCC2 1516 aa9.69□□□□□ -0.86
Scn1a-202ENSMUST00000094951 P3h3Q8CG70 732 aa9.69□□□□□ -0.86
Scn1a-202ENSMUST00000094951 Setd5Q5XJV7 1441 aa9.67□□□□□ -0.86
Scn1a-202ENSMUST00000094951 HdgfP51859 237 aaKnown RBP9.67□□□□□ -0.86
Scn1a-202ENSMUST00000094951 Myt1Q8CFC2 1127 aa9.66□□□□□ -0.86
Scn1a-202ENSMUST00000094951 Dhx57Q6P5D3 1388 aaKnown RBP9.66□□□□□ -0.86
Scn1a-202ENSMUST00000094951 BlmO88700 1416 aa9.65□□□□□ -0.86
Scn1a-202ENSMUST00000094951 AknaQ80VW7 1404 aa9.64□□□□□ -0.87
Scn1a-202ENSMUST00000094951 Lemd3Q9WU40 921 aa9.63□□□□□ -0.87
Scn1a-202ENSMUST00000094951 Nop58Q6DFW4 536 aaKnown RBP9.62□□□□□ -0.87
Scn1a-202ENSMUST00000094951 MlecQ6ZQI3 291 aaKnown RBP9.61□□□□□ -0.87
Scn1a-202ENSMUST00000094951 Cux2P70298 1426 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 132.1 ms