Protein–RNA interactions for Protein: Q61789

Lama3, Laminin subunit alpha-3, mousemouse

Predictions only

Length 3,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama3Q61789 Gm25239-201ENSMUST00000174915 86 ntBASIC43.78■■■■■ 4.6
Lama3Q61789 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.78■■■■■ 4.12
Lama3Q61789 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.04■■■■■ 4
Lama3Q61789 Gm24109-201ENSMUST00000175489 103 ntBASIC38.54■■■■□ 3.76
Lama3Q61789 Gm15042-201ENSMUST00000120212 883 ntBASIC37.2■■■■□ 3.55
Lama3Q61789 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Lama3Q61789 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.11■■■■□ 3.53
Lama3Q61789 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
Lama3Q61789 Gm15045-201ENSMUST00000117359 883 ntBASIC36.51■■■■□ 3.44
Lama3Q61789 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Lama3Q61789 Gm23366-201ENSMUST00000175022 89 ntBASIC36.24■■■■□ 3.39
Lama3Q61789 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.14■■■■□ 3.38
Lama3Q61789 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Lama3Q61789 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36■■■■□ 3.35
Lama3Q61789 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Lama3Q61789 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.72■■■■□ 3.31
Lama3Q61789 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.04■■■■□ 3.2
Lama3Q61789 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Lama3Q61789 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Lama3Q61789 Gm25238-201ENSMUST00000174914 89 ntBASIC34.96■■■■□ 3.19
Lama3Q61789 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Lama3Q61789 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.62■■■■□ 3.13
Lama3Q61789 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.15■■■■□ 3.06
Lama3Q61789 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
Lama3Q61789 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.04■■■■□ 3.04
Lama3Q61789 Gm25262-201ENSMUST00000174934 133 ntBASIC33.98■■■■□ 3.03
Lama3Q61789 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Lama3Q61789 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.58■■■□□ 2.97
Lama3Q61789 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.97
Lama3Q61789 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Lama3Q61789 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.52■■■□□ 2.96
Lama3Q61789 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.47■■■□□ 2.95
Lama3Q61789 Gm26115-201ENSMUST00000175605 87 ntBASIC33.34■■■□□ 2.93
Lama3Q61789 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
Lama3Q61789 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.31■■■□□ 2.92
Lama3Q61789 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.24■■■□□ 2.91
Lama3Q61789 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Lama3Q61789 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Lama3Q61789 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.1■■■□□ 2.89
Lama3Q61789 Gm8109-201ENSMUST00000194076 746 ntBASIC33.06■■■□□ 2.88
Lama3Q61789 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Lama3Q61789 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Lama3Q61789 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Lama3Q61789 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.95■■■□□ 2.87
Lama3Q61789 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
Lama3Q61789 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Lama3Q61789 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.79■■■□□ 2.84
Lama3Q61789 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.71■■■□□ 2.83
Lama3Q61789 Gm27325-201ENSMUST00000175467 74 ntBASIC32.65■■■□□ 2.82
Lama3Q61789 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Lama3Q61789 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Lama3Q61789 Rab21-202ENSMUST00000218831 843 ntBASIC32.56■■■□□ 2.8
Lama3Q61789 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Lama3Q61789 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
Lama3Q61789 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.48■■■□□ 2.79
Lama3Q61789 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Lama3Q61789 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.24■■■□□ 2.75
Lama3Q61789 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.24■■■□□ 2.75
Lama3Q61789 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
Lama3Q61789 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Lama3Q61789 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Lama3Q61789 Gm24804-201ENSMUST00000174982 85 ntBASIC32.1■■■□□ 2.73
Lama3Q61789 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Lama3Q61789 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Lama3Q61789 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Lama3Q61789 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Lama3Q61789 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Lama3Q61789 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Lama3Q61789 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Lama3Q61789 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.7■■■□□ 2.66
Lama3Q61789 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Lama3Q61789 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.68■■■□□ 2.66
Lama3Q61789 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.67■■■□□ 2.66
Lama3Q61789 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.64■■■□□ 2.66
Lama3Q61789 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.63■■■□□ 2.65
Lama3Q61789 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Lama3Q61789 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Lama3Q61789 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Lama3Q61789 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.51■■■□□ 2.63
Lama3Q61789 Zfp131-205ENSMUST00000223812 663 ntBASIC31.51■■■□□ 2.63
Lama3Q61789 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Lama3Q61789 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Lama3Q61789 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.4■■■□□ 2.62
Lama3Q61789 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Lama3Q61789 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.37■■■□□ 2.61
Lama3Q61789 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
Lama3Q61789 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Lama3Q61789 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Lama3Q61789 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Lama3Q61789 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.16■■■□□ 2.58
Lama3Q61789 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Lama3Q61789 Gm27322-201ENSMUST00000184007 104 ntBASIC31.14■■■□□ 2.58
Lama3Q61789 Psd-208ENSMUST00000224556 2034 ntBASIC31.14■■■□□ 2.57
Lama3Q61789 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Lama3Q61789 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.1■■■□□ 2.57
Lama3Q61789 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Lama3Q61789 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.06■■■□□ 2.56
Lama3Q61789 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Lama3Q61789 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Lama3Q61789 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.05■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms