Protein–RNA interactions for Protein: Q61789

Lama3, Laminin subunit alpha-3, mousemouse

Predictions only

Length 3,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama3Q61789 Gm25239-201ENSMUST00000174915 86 ntBASIC43,78■■■■■ 4,6
Lama3Q61789 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40,78■■■■■ 4,12
Lama3Q61789 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40,04■■■■■ 4
Lama3Q61789 Gm24109-201ENSMUST00000175489 103 ntBASIC38,54■■■■□ 3,76
Lama3Q61789 Gm15042-201ENSMUST00000120212 883 ntBASIC37,2■■■■□ 3,55
Lama3Q61789 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37,16■■■■□ 3,54
Lama3Q61789 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37,11■■■■□ 3,53
Lama3Q61789 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36,73■■■■□ 3,47
Lama3Q61789 Gm15045-201ENSMUST00000117359 883 ntBASIC36,51■■■■□ 3,44
Lama3Q61789 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36,44■■■■□ 3,42
Lama3Q61789 Gm23366-201ENSMUST00000175022 89 ntBASIC36,24■■■■□ 3,39
Lama3Q61789 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36,14■■■■□ 3,38
Lama3Q61789 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36,01■■■■□ 3,36
Lama3Q61789 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36■■■■□ 3,35
Lama3Q61789 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35,9■■■■□ 3,34
Lama3Q61789 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35,72■■■■□ 3,31
Lama3Q61789 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35,04■■■■□ 3,2
Lama3Q61789 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34,99■■■■□ 3,19
Lama3Q61789 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34,97■■■■□ 3,19
Lama3Q61789 Gm25238-201ENSMUST00000174914 89 ntBASIC34,96■■■■□ 3,19
Lama3Q61789 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34,75■■■■□ 3,15
Lama3Q61789 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34,62■■■■□ 3,13
Lama3Q61789 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34,15■■■■□ 3,06
Lama3Q61789 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34,11■■■■□ 3,05
Lama3Q61789 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34,04■■■■□ 3,04
Lama3Q61789 Gm25262-201ENSMUST00000174934 133 ntBASIC33,98■■■■□ 3,03
Lama3Q61789 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33,93■■■■□ 3,02
Lama3Q61789 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33,58■■■□□ 2,97
Lama3Q61789 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33,57■■■□□ 2,97
Lama3Q61789 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33,52■■■□□ 2,96
Lama3Q61789 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33,52■■■□□ 2,96
Lama3Q61789 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33,47■■■□□ 2,95
Lama3Q61789 Gm26115-201ENSMUST00000175605 87 ntBASIC33,34■■■□□ 2,93
Lama3Q61789 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33,32■■■□□ 2,92
Lama3Q61789 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33,31■■■□□ 2,92
Lama3Q61789 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33,24■■■□□ 2,91
Lama3Q61789 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33,21■■■□□ 2,91
Lama3Q61789 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33,2■■■□□ 2,91
Lama3Q61789 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,1■■■□□ 2,89
Lama3Q61789 Gm8109-201ENSMUST00000194076 746 ntBASIC33,06■■■□□ 2,88
Lama3Q61789 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33,04■■■□□ 2,88
Lama3Q61789 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33,02■■■□□ 2,88
Lama3Q61789 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32,97■■■□□ 2,87
Lama3Q61789 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32,95■■■□□ 2,87
Lama3Q61789 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,87■■■□□ 2,85
Lama3Q61789 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,83■■■□□ 2,85
Lama3Q61789 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32,79■■■□□ 2,84
Lama3Q61789 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32,71■■■□□ 2,83
Lama3Q61789 Gm27325-201ENSMUST00000175467 74 ntBASIC32,65■■■□□ 2,82
Lama3Q61789 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32,61■■■□□ 2,81
Lama3Q61789 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32,6■■■□□ 2,81
Lama3Q61789 Rab21-202ENSMUST00000218831 843 ntBASIC32,56■■■□□ 2,8
Lama3Q61789 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32,54■■■□□ 2,8
Lama3Q61789 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32,49■■■□□ 2,79
Lama3Q61789 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,48■■■□□ 2,79
Lama3Q61789 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32,33■■■□□ 2,77
Lama3Q61789 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32,24■■■□□ 2,75
Lama3Q61789 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32,24■■■□□ 2,75
Lama3Q61789 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32,21■■■□□ 2,75
Lama3Q61789 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32,17■■■□□ 2,74
Lama3Q61789 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32,1■■■□□ 2,73
Lama3Q61789 Gm24804-201ENSMUST00000174982 85 ntBASIC32,1■■■□□ 2,73
Lama3Q61789 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31,99■■■□□ 2,71
Lama3Q61789 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31,87■■■□□ 2,69
Lama3Q61789 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31,86■■■□□ 2,69
Lama3Q61789 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31,86■■■□□ 2,69
Lama3Q61789 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31,8■■■□□ 2,68
Lama3Q61789 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31,78■■■□□ 2,68
Lama3Q61789 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31,77■■■□□ 2,68
Lama3Q61789 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31,7■■■□□ 2,66
Lama3Q61789 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31,68■■■□□ 2,66
Lama3Q61789 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31,68■■■□□ 2,66
Lama3Q61789 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31,67■■■□□ 2,66
Lama3Q61789 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31,64■■■□□ 2,66
Lama3Q61789 Gm17082-201ENSMUST00000166043 1091 ntBASIC31,63■■■□□ 2,65
Lama3Q61789 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31,56■■■□□ 2,64
Lama3Q61789 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31,54■■■□□ 2,64
Lama3Q61789 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31,52■■■□□ 2,64
Lama3Q61789 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31,51■■■□□ 2,63
Lama3Q61789 Zfp131-205ENSMUST00000223812 663 ntBASIC31,51■■■□□ 2,63
Lama3Q61789 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31,46■■■□□ 2,63
Lama3Q61789 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31,4■■■□□ 2,62
Lama3Q61789 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31,4■■■□□ 2,62
Lama3Q61789 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31,39■■■□□ 2,62
Lama3Q61789 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31,37■■■□□ 2,61
Lama3Q61789 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31,36■■■□□ 2,61
Lama3Q61789 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31,34■■■□□ 2,61
Lama3Q61789 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31,34■■■□□ 2,61
Lama3Q61789 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Lama3Q61789 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31,16■■■□□ 2,58
Lama3Q61789 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31,16■■■□□ 2,58
Lama3Q61789 Gm27322-201ENSMUST00000184007 104 ntBASIC31,14■■■□□ 2,58
Lama3Q61789 Psd-208ENSMUST00000224556 2034 ntBASIC31,14■■■□□ 2,57
Lama3Q61789 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31,13■■■□□ 2,57
Lama3Q61789 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31,1■■■□□ 2,57
Lama3Q61789 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
Lama3Q61789 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31,06■■■□□ 2,56
Lama3Q61789 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31,05■■■□□ 2,56
Lama3Q61789 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31,05■■■□□ 2,56
Lama3Q61789 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31,05■■■□□ 2,56
Retrieved 100 of 76,532 protein–RNA pairs in 8,5 ms