RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Uqcr11Q9CPX8 56 aa6.76□□□□□ -1.33
Rtn3-204ENSMUST00000088171 AspmQ8CJ27 3122 aa6.76□□□□□ -1.33
Rtn3-204ENSMUST00000088171 Dchs1E9PVD3 3291 aa6.75□□□□□ -1.33
Rtn3-204ENSMUST00000088171 Akap9Q70FJ1 3797 aa6.75□□□□□ -1.33
Rtn3-204ENSMUST00000088171 Gm7276Q3TYW4 209 aa6.75□□□□□ -1.33
Rtn3-204ENSMUST00000088171 Jbts17Q8CE72 3214 aa6.75□□□□□ -1.33
Rtn3-204ENSMUST00000088171 Krtap16-1A2A5X5 502 aa6.75□□□□□ -1.33
Rtn3-204ENSMUST00000088171 Vps13aQ5H8C4 3166 aa6.74□□□□□ -1.33
Rtn3-204ENSMUST00000088171 Cypt14J3QPF7 87 aa6.74□□□□□ -1.33
Rtn3-204ENSMUST00000088171 HrnrQ8VHD8 2496 aa6.73□□□□□ -1.33
Rtn3-204ENSMUST00000088171 Gm10308Q9CVR5 141 aa6.72□□□□□ -1.33
Rtn3-204ENSMUST00000088171 Cep350E9Q309 3095 aa6.71□□□□□ -1.34
Rtn3-204ENSMUST00000088171 Coa5Q99M07 74 aa6.69□□□□□ -1.34
Rtn3-204ENSMUST00000088171 Tep1P97499 2629 aa6.69□□□□□ -1.34
Rtn3-204ENSMUST00000088171 2310034C09RikQ9D746 214 aa6.69□□□□□ -1.34
Rtn3-204ENSMUST00000088171 Krtap15-1Q9QZU5 150 aa6.69□□□□□ -1.34
Rtn3-204ENSMUST00000088171 TrioQ0KL02 3102 aa6.69□□□□□ -1.34
Rtn3-204ENSMUST00000088171 Gm21798J3QNU5 87 aa6.68□□□□□ -1.34
Rtn3-204ENSMUST00000088171 HttP42859 3119 aa6.67□□□□□ -1.34
Rtn3-204ENSMUST00000088171 A530084C06RikQ3UTW2 186 aa6.66□□□□□ -1.34
Rtn3-204ENSMUST00000088171 Itpr1P11881 2749 aa6.66□□□□□ -1.34
Rtn3-204ENSMUST00000088171 Gm7138L7N2C3 230 aa6.66□□□□□ -1.34
Rtn3-204ENSMUST00000088171 Gm3238W4VSP7 230 aa6.66□□□□□ -1.34
Rtn3-204ENSMUST00000088171 Camk2n1Q6QWF9 78 aa6.66□□□□□ -1.34
Rtn3-204ENSMUST00000088171 Gm9955Q8CEJ8 102 aa6.65□□□□□ -1.34
Rtn3-204ENSMUST00000088171 Gm7137J3QMW1 236 aa6.64□□□□□ -1.35
Rtn3-204ENSMUST00000088171 Rev3lQ61493 3122 aa6.63□□□□□ -1.35
Rtn3-204ENSMUST00000088171 Phxr4P15974 95 aa6.63□□□□□ -1.35
Rtn3-204ENSMUST00000088171 Mki67E9PVX6 3177 aaKnown RBP6.62□□□□□ -1.35
Rtn3-204ENSMUST00000088171 Stab2Q8R4U0 2559 aa6.61□□□□□ -1.35
Rtn3-204ENSMUST00000088171 Odf3bQ5M8M2 238 aa6.6□□□□□ -1.35
Rtn3-204ENSMUST00000088171 Frem2Q6NVD0 3160 aa6.6□□□□□ -1.35
Rtn3-204ENSMUST00000088171 Gm17349F7BGH6 99 aa6.6□□□□□ -1.35
Rtn3-204ENSMUST00000088171 Gcn1E9PVA8 2671 aaKnown RBP6.59□□□□□ -1.35
Rtn3-204ENSMUST00000088171 Pkd1l1Q8R526 2615 aa6.58□□□□□ -1.36
Rtn3-204ENSMUST00000088171 C530025M09RikF6RGA8 229 aa6.58□□□□□ -1.36
Rtn3-204ENSMUST00000088171 Gm4491E0CX42 125 aa6.57□□□□□ -1.36
Rtn3-204ENSMUST00000088171 Lrrc37aB1AWG4 3215 aa6.57□□□□□ -1.36
Rtn3-204ENSMUST00000088171 Gm10643Q3URG9 111 aa6.56□□□□□ -1.36
Rtn3-204ENSMUST00000088171 Gm19426M0QWC7 77 aa6.54□□□□□ -1.36
Rtn3-204ENSMUST00000088171 Map1aQ9QYR6 2776 aa6.53□□□□□ -1.36
Rtn3-204ENSMUST00000088171 Ubr5Q80TP3 2792 aa6.52□□□□□ -1.37
Rtn3-204ENSMUST00000088171 Gm5767A0A0J9YTU8 78 aa6.52□□□□□ -1.37
Rtn3-204ENSMUST00000088171 Gm7173A0A0G2JEB6 3132 aa6.51□□□□□ -1.37
Rtn3-204ENSMUST00000088171 Col6a5A6H584 2640 aa6.49□□□□□ -1.37
Rtn3-204ENSMUST00000088171 PcntP48725 2898 aa6.48□□□□□ -1.37
Rtn3-204ENSMUST00000088171 Dmxl1Q6PNC0 3013 aa6.47□□□□□ -1.37
Rtn3-204ENSMUST00000088171 NipblQ6KCD5 2798 aaKnown RBP6.47□□□□□ -1.37
Rtn3-204ENSMUST00000088171 Dmbt1Q60997 2085 aa6.47□□□□□ -1.37
Rtn3-204ENSMUST00000088171 FryE9Q8I9 3020 aa6.45□□□□□ -1.38
Rtn3-204ENSMUST00000088171 Muc4Q8JZM8 3443 aa6.45□□□□□ -1.38
Rtn3-204ENSMUST00000088171 Lama1P19137 3084 aa6.45□□□□□ -1.38
Rtn3-204ENSMUST00000088171 6030445D17RikE9Q8F9 148 aa6.45□□□□□ -1.38
Rtn3-204ENSMUST00000088171 Eif4ebp3Q80VV3 101 aa6.43□□□□□ -1.38
Rtn3-204ENSMUST00000088171 BC029722A0A0N4SW31 51 aa6.42□□□□□ -1.38
Rtn3-204ENSMUST00000088171 Gm3880A0A1B0GSB3 72 aa6.41□□□□□ -1.38
Rtn3-204ENSMUST00000088171 FrylF8VQ05 3007 aa6.41□□□□□ -1.38
Rtn3-204ENSMUST00000088171 Nbeal2Q6ZQA0 2742 aa6.39□□□□□ -1.39
Rtn3-204ENSMUST00000088171 Gm9195A0A140LHT4 2805 aa6.38□□□□□ -1.39
Rtn3-204ENSMUST00000088171 FcgbpE9Q0B5 2583 aa6.38□□□□□ -1.39
Rtn3-204ENSMUST00000088171 Gm36176A0A1W2P8D5 158 aa6.38□□□□□ -1.39
Rtn3-204ENSMUST00000088171 Smim29Q8R043 75 aa6.37□□□□□ -1.39
Rtn3-204ENSMUST00000088171 Csmd1Q923L3 3564 aa6.36□□□□□ -1.39
Rtn3-204ENSMUST00000088171 Lelp1Q9DAE3 120 aa6.36□□□□□ -1.39
Rtn3-204ENSMUST00000088171 Gm10139O88245 57 aa6.34□□□□□ -1.39
Rtn3-204ENSMUST00000088171 Gm16253D3Z167 63 aa6.34□□□□□ -1.4
Rtn3-204ENSMUST00000088171 Celsr3Q91ZI0 3301 aa6.33□□□□□ -1.4
Rtn3-204ENSMUST00000088171 Wdfy4E9Q2M9 3149 aa6.33□□□□□ -1.4
Rtn3-204ENSMUST00000088171 Krtap13O88375 197 aa6.32□□□□□ -1.4
Rtn3-204ENSMUST00000088171 Smg1Q8BKX6 3658 aaKnown RBP6.31□□□□□ -1.4
Rtn3-204ENSMUST00000088171 Sprr1aQ62266 144 aa6.3□□□□□ -1.4
Rtn3-204ENSMUST00000088171 Gm9508A0A1W2P7W0 230 aa6.3□□□□□ -1.4
Rtn3-204ENSMUST00000088171 Krtap29-1A2A5X4 342 aa6.27□□□□□ -1.41
Rtn3-204ENSMUST00000088171 SmcpP15265 143 aa6.26□□□□□ -1.41
Rtn3-204ENSMUST00000088171 2310050C09RikG5E8Z3 280 aa6.24□□□□□ -1.41
Rtn3-204ENSMUST00000088171 Gm21887J3QQ04 176 aa6.24□□□□□ -1.41
Rtn3-204ENSMUST00000088171 Prune2Q52KR3 3084 aa6.24□□□□□ -1.41
Rtn3-204ENSMUST00000088171 Rpl37Q9D823 97 aa6.24□□□□□ -1.41
Rtn3-204ENSMUST00000088171 Hivep1Q03172 2688 aa6.23□□□□□ -1.41
Rtn3-204ENSMUST00000088171 FlncQ8VHX6 2726 aaKnown RBP6.22□□□□□ -1.41
Rtn3-204ENSMUST00000088171 AtmQ62388 3066 aa6.21□□□□□ -1.42
Rtn3-204ENSMUST00000088171 Tnp2P11378 117 aa6.2□□□□□ -1.42
Rtn3-204ENSMUST00000088171 Chd7A2AJK6 2986 aaKnown RBP6.19□□□□□ -1.42
Rtn3-204ENSMUST00000088171 Lama5Q61001 3718 aa6.18□□□□□ -1.42
Rtn3-204ENSMUST00000088171 Myo15bI7HPW8 3033 aa6.17□□□□□ -1.42
Rtn3-204ENSMUST00000088171 Rps29P62274 56 aa6.17□□□□□ -1.42
Rtn3-204ENSMUST00000088171 Fam229bQ8CF36 80 aa6.16□□□□□ -1.42
Rtn3-204ENSMUST00000088171 BptfA2A654 3036 aaKnown RBP6.16□□□□□ -1.42
Rtn3-204ENSMUST00000088171 Gm2310J3QNJ2 377 aa6.14□□□□□ -1.43
Rtn3-204ENSMUST00000088171 CenpfE9Q3P4 2997 aaKnown RBP6.14□□□□□ -1.43
Rtn3-204ENSMUST00000088171 Vps13cQ8BX70 3748 aa6.13□□□□□ -1.43
Rtn3-204ENSMUST00000088171 Celsr1O35161 3034 aa6.13□□□□□ -1.43
Rtn3-204ENSMUST00000088171 Csmd2V9GX34 3611 aa6.13□□□□□ -1.43
Rtn3-204ENSMUST00000088171 Cmya5Q70KF4 3739 aa6.12□□□□□ -1.43
Rtn3-204ENSMUST00000088171 Gm9507D3Z5T3 223 aa6.12□□□□□ -1.43
Rtn3-204ENSMUST00000088171 Gm37013Q8K491 104 aa6.1□□□□□ -1.43
Rtn3-204ENSMUST00000088171 Romo1P60603 79 aa6.09□□□□□ -1.44
Rtn3-204ENSMUST00000088171 Cystm1Q8K353 104 aa6.08□□□□□ -1.44
Rtn3-204ENSMUST00000088171 1700042G07RikB1AUF7 90 aa6.07□□□□□ -1.44
Rtn3-204ENSMUST00000088171 Krtap10-10A0A1W2P7T6 217 aa6.05□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 71.3 ms