Protein–RNA interactions for Protein: Q61001

Lama5, Laminin subunit alpha-5, mousemouse

Predictions only

Length 3,718 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama5Q61001 Gm25239-201ENSMUST00000174915 86 ntBASIC35,49■■■■□ 3,27
Lama5Q61001 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,96■■■□□ 2,87
Lama5Q61001 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32,37■■■□□ 2,77
Lama5Q61001 Gm24109-201ENSMUST00000175489 103 ntBASIC31,23■■■□□ 2,59
Lama5Q61001 Gm15042-201ENSMUST00000120212 883 ntBASIC30,23■■■□□ 2,43
Lama5Q61001 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30,09■■■□□ 2,41
Lama5Q61001 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Lama5Q61001 Gm15045-201ENSMUST00000117359 883 ntBASIC29,71■■■□□ 2,35
Lama5Q61001 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,66■■■□□ 2,34
Lama5Q61001 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Lama5Q61001 Gm23366-201ENSMUST00000175022 89 ntBASIC29,34■■■□□ 2,29
Lama5Q61001 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29,18■■■□□ 2,26
Lama5Q61001 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29,09■■■□□ 2,25
Lama5Q61001 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,23
Lama5Q61001 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28,85■■■□□ 2,21
Lama5Q61001 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Lama5Q61001 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Lama5Q61001 Gm25238-201ENSMUST00000174914 89 ntBASIC28,32■■■□□ 2,12
Lama5Q61001 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28,31■■■□□ 2,12
Lama5Q61001 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28,31■■■□□ 2,12
Lama5Q61001 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28,15■■■□□ 2,1
Lama5Q61001 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,12■■■□□ 2,09
Lama5Q61001 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2,07
Lama5Q61001 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27,64■■■□□ 2,01
Lama5Q61001 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27,62■■■□□ 2,01
Lama5Q61001 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27,55■■■□□ 2
Lama5Q61001 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27,51■■□□□ 1,99
Lama5Q61001 Gm25262-201ENSMUST00000174934 133 ntBASIC27,46■■□□□ 1,99
Lama5Q61001 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27,23■■□□□ 1,95
Lama5Q61001 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27,19■■□□□ 1,94
Lama5Q61001 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27,14■■□□□ 1,93
Lama5Q61001 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27,13■■□□□ 1,93
Lama5Q61001 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,1■■□□□ 1,93
Lama5Q61001 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27,01■■□□□ 1,91
Lama5Q61001 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27■■□□□ 1,91
Lama5Q61001 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1,91
Lama5Q61001 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26,95■■□□□ 1,9
Lama5Q61001 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26,9■■□□□ 1,9
Lama5Q61001 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26,87■■□□□ 1,89
Lama5Q61001 Gm26115-201ENSMUST00000175605 87 ntBASIC26,86■■□□□ 1,89
Lama5Q61001 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Lama5Q61001 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,8■■□□□ 1,88
Lama5Q61001 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26,79■■□□□ 1,88
Lama5Q61001 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26,75■■□□□ 1,87
Lama5Q61001 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26,74■■□□□ 1,87
Lama5Q61001 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
Lama5Q61001 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26,65■■□□□ 1,86
Lama5Q61001 Gm8109-201ENSMUST00000194076 746 ntBASIC26,58■■□□□ 1,85
Lama5Q61001 Gm27325-201ENSMUST00000175467 74 ntBASIC26,55■■□□□ 1,84
Lama5Q61001 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26,55■■□□□ 1,84
Lama5Q61001 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Lama5Q61001 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26,52■■□□□ 1,84
Lama5Q61001 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26,42■■□□□ 1,82
Lama5Q61001 Rab21-202ENSMUST00000218831 843 ntBASIC26,4■■□□□ 1,82
Lama5Q61001 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26,39■■□□□ 1,82
Lama5Q61001 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Lama5Q61001 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,19■■□□□ 1,78
Lama5Q61001 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,17■■□□□ 1,78
Lama5Q61001 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,17■■□□□ 1,78
Lama5Q61001 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26,15■■□□□ 1,78
Lama5Q61001 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26,14■■□□□ 1,78
Lama5Q61001 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26,03■■□□□ 1,76
Lama5Q61001 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,01■■□□□ 1,76
Lama5Q61001 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,01■■□□□ 1,75
Lama5Q61001 Gm24804-201ENSMUST00000174982 85 ntBASIC25,93■■□□□ 1,74
Lama5Q61001 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Lama5Q61001 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,85■■□□□ 1,73
Lama5Q61001 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25,82■■□□□ 1,72
Lama5Q61001 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Lama5Q61001 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25,82■■□□□ 1,72
Lama5Q61001 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25,76■■□□□ 1,71
Lama5Q61001 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Lama5Q61001 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25,7■■□□□ 1,71
Lama5Q61001 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25,65■■□□□ 1,7
Lama5Q61001 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25,65■■□□□ 1,7
Lama5Q61001 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,62■■□□□ 1,69
Lama5Q61001 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25,53■■□□□ 1,68
Lama5Q61001 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,48■■□□□ 1,67
Lama5Q61001 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25,48■■□□□ 1,67
Lama5Q61001 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25,47■■□□□ 1,67
Lama5Q61001 Psd-208ENSMUST00000224556 2034 ntBASIC25,47■■□□□ 1,67
Lama5Q61001 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25,46■■□□□ 1,67
Lama5Q61001 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25,44■■□□□ 1,66
Lama5Q61001 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25,42■■□□□ 1,66
Lama5Q61001 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,4■■□□□ 1,66
Lama5Q61001 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Lama5Q61001 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Lama5Q61001 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Lama5Q61001 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25,39■■□□□ 1,66
Lama5Q61001 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,39■■□□□ 1,65
Lama5Q61001 Zfp131-205ENSMUST00000223812 663 ntBASIC25,33■■□□□ 1,65
Lama5Q61001 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,64
Lama5Q61001 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Lama5Q61001 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25,29■■□□□ 1,64
Lama5Q61001 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Lama5Q61001 Gm27322-201ENSMUST00000184007 104 ntBASIC25,26■■□□□ 1,63
Lama5Q61001 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25,18■■□□□ 1,62
Lama5Q61001 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25,17■■□□□ 1,62
Lama5Q61001 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Lama5Q61001 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Retrieved 100 of 76,532 protein–RNA pairs in 12,3 ms