RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 HrnrQ8VHD8 2496 aa6.98□□□□□ -1.29
Ciita-201ENSMUST00000023147 Bod1lE9Q6J5 3032 aa6.97□□□□□ -1.29
Ciita-201ENSMUST00000023147 Dmbt1Q60997 2085 aa6.96□□□□□ -1.3
Ciita-201ENSMUST00000023147 Vps13aQ5H8C4 3166 aa6.95□□□□□ -1.3
Ciita-201ENSMUST00000023147 Gm10320E9PW43 113 aa6.94□□□□□ -1.3
Ciita-201ENSMUST00000023147 MgaA2AWL7 3003 aaKnown RBP6.94□□□□□ -1.3
Ciita-201ENSMUST00000023147 Gcn1E9PVA8 2671 aaKnown RBP6.93□□□□□ -1.3
Ciita-201ENSMUST00000023147 Anapc11Q9CPX9 84 aa6.93□□□□□ -1.3
Ciita-201ENSMUST00000023147 Dmxl1Q6PNC0 3013 aa6.92□□□□□ -1.3
Ciita-201ENSMUST00000023147 Fbn2Q61555 2907 aa6.9□□□□□ -1.3
Ciita-201ENSMUST00000023147 FrylF8VQ05 3007 aa6.9□□□□□ -1.3
Ciita-201ENSMUST00000023147 Akap13E9Q394 2776 aa6.9□□□□□ -1.3
Ciita-201ENSMUST00000023147 Notch1Q01705 2531 aa6.9□□□□□ -1.3
Ciita-201ENSMUST00000023147 Mast4Q811L6 2618 aa6.89□□□□□ -1.31
Ciita-201ENSMUST00000023147 Gm3880A0A1B0GSB3 72 aa6.89□□□□□ -1.31
Ciita-201ENSMUST00000023147 Itpr1P11881 2749 aa6.88□□□□□ -1.31
Ciita-201ENSMUST00000023147 Fam104aA2A6P4 185 aa6.88□□□□□ -1.31
Ciita-201ENSMUST00000023147 Camk2n1Q6QWF9 78 aa6.88□□□□□ -1.31
Ciita-201ENSMUST00000023147 Zcchc13Q9D548 170 aa6.88□□□□□ -1.31
Ciita-201ENSMUST00000023147 Plac8Q9JI48 112 aa6.87□□□□□ -1.31
Ciita-201ENSMUST00000023147 AspmQ8CJ27 3122 aa6.86□□□□□ -1.31
Ciita-201ENSMUST00000023147 Frem2Q6NVD0 3160 aa6.86□□□□□ -1.31
Ciita-201ENSMUST00000023147 Cypt14J3QPF7 87 aa6.86□□□□□ -1.31
Ciita-201ENSMUST00000023147 A730071L15RikQ8C4X0 137 aa6.86□□□□□ -1.31
Ciita-201ENSMUST00000023147 Lama1P19137 3084 aa6.86□□□□□ -1.31
Ciita-201ENSMUST00000023147 AtmQ62388 3066 aa6.85□□□□□ -1.31
Ciita-201ENSMUST00000023147 Nsd1O88491 2588 aaKnown RBP6.84□□□□□ -1.31
Ciita-201ENSMUST00000023147 Fam229aB2KGE5 128 aa6.84□□□□□ -1.31
Ciita-201ENSMUST00000023147 FryE9Q8I9 3020 aa6.82□□□□□ -1.32
Ciita-201ENSMUST00000023147 KalrnA2CG49 2964 aa6.81□□□□□ -1.32
Ciita-201ENSMUST00000023147 Wdfy4E9Q2M9 3149 aa6.8□□□□□ -1.32
Ciita-201ENSMUST00000023147 NbdyA0A0N4SUI7 68 aa6.79□□□□□ -1.32
Ciita-201ENSMUST00000023147 Celsr1O35161 3034 aa6.79□□□□□ -1.32
Ciita-201ENSMUST00000023147 Gm3233E9Q2H5 230 aa6.79□□□□□ -1.32
Ciita-201ENSMUST00000023147 FlnaQ8BTM8 2647 aaKnown RBP6.79□□□□□ -1.32
Ciita-201ENSMUST00000023147 Lrrc37aB1AWG4 3215 aa6.78□□□□□ -1.32
Ciita-201ENSMUST00000023147 Gm10065F6TJM2 114 aa6.78□□□□□ -1.32
Ciita-201ENSMUST00000023147 Ash1lQ99MY8 2958 aa6.77□□□□□ -1.33
Ciita-201ENSMUST00000023147 Gm4491E0CX42 125 aa6.77□□□□□ -1.33
Ciita-201ENSMUST00000023147 Smim29Q8R043 75 aa6.76□□□□□ -1.33
Ciita-201ENSMUST00000023147 6030445D17RikE9Q8F9 148 aa6.76□□□□□ -1.33
Ciita-201ENSMUST00000023147 Gm37013Q8K491 104 aa6.74□□□□□ -1.33
Ciita-201ENSMUST00000023147 1700042G07RikB1AUF7 90 aa6.73□□□□□ -1.33
Ciita-201ENSMUST00000023147 BptfA2A654 3036 aaKnown RBP6.72□□□□□ -1.33
Ciita-201ENSMUST00000023147 Sec61bQ9CQS8 96 aaKnown RBP6.72□□□□□ -1.33
Ciita-201ENSMUST00000023147 Celsr3Q91ZI0 3301 aa6.72□□□□□ -1.33
Ciita-201ENSMUST00000023147 Itpr3P70227 2670 aa6.72□□□□□ -1.33
Ciita-201ENSMUST00000023147 Sprr1aQ62266 144 aa6.7□□□□□ -1.34
Ciita-201ENSMUST00000023147 Odf3bQ5M8M2 238 aa6.7□□□□□ -1.34
Ciita-201ENSMUST00000023147 NipblQ6KCD5 2798 aaKnown RBP6.68□□□□□ -1.34
Ciita-201ENSMUST00000023147 Gm10139O88245 57 aa6.68□□□□□ -1.34
Ciita-201ENSMUST00000023147 Igsf10Q3V1M1 2594 aa6.68□□□□□ -1.34
Ciita-201ENSMUST00000023147 Krtap15-1Q9QZU5 150 aa6.68□□□□□ -1.34
Ciita-201ENSMUST00000023147 Zzef1Q5SSH7 2924 aa6.67□□□□□ -1.34
Ciita-201ENSMUST00000023147 Stab1Q8R4Y4 2571 aa6.66□□□□□ -1.34
Ciita-201ENSMUST00000023147 Wdfy3Q6VNB8 3508 aa6.65□□□□□ -1.34
Ciita-201ENSMUST00000023147 4933415A04RikQ9D443 101 aa6.65□□□□□ -1.34
Ciita-201ENSMUST00000023147 DspE9Q557 2883 aaKnown RBP6.64□□□□□ -1.35
Ciita-201ENSMUST00000023147 Rpl37Q9D823 97 aa6.63□□□□□ -1.35
Ciita-201ENSMUST00000023147 Gm3646F6S692 53 aa6.63□□□□□ -1.35
Ciita-201ENSMUST00000023147 Chd6A3KFM7 2711 aa6.63□□□□□ -1.35
Ciita-201ENSMUST00000023147 Dmxl2Q8BPN8 3032 aa6.62□□□□□ -1.35
Ciita-201ENSMUST00000023147 Brca2P97929 3329 aa6.61□□□□□ -1.35
Ciita-201ENSMUST00000023147 Gm7138L7N2C3 230 aa6.6□□□□□ -1.35
Ciita-201ENSMUST00000023147 Gm3238W4VSP7 230 aa6.6□□□□□ -1.35
Ciita-201ENSMUST00000023147 9530053A07RikE9PVG8 2581 aa6.59□□□□□ -1.35
Ciita-201ENSMUST00000023147 BC029722A0A0N4SW31 51 aa6.59□□□□□ -1.35
Ciita-201ENSMUST00000023147 Gm19426M0QWC7 77 aa6.58□□□□□ -1.36
Ciita-201ENSMUST00000023147 Romo1P60603 79 aa6.56□□□□□ -1.36
Ciita-201ENSMUST00000023147 Adgrg4B7ZCC9 3073 aa6.54□□□□□ -1.36
Ciita-201ENSMUST00000023147 Tep1P97499 2629 aa6.52□□□□□ -1.37
Ciita-201ENSMUST00000023147 Trank1Q8BV79 2999 aa6.52□□□□□ -1.37
Ciita-201ENSMUST00000023147 DmdP11531 3678 aa6.51□□□□□ -1.37
Ciita-201ENSMUST00000023147 Gm16253D3Z167 63 aa6.51□□□□□ -1.37
Ciita-201ENSMUST00000023147 Dchs2A0A0A6YW72 3346 aa6.5□□□□□ -1.37
Ciita-201ENSMUST00000023147 Gm7137J3QMW1 236 aa6.49□□□□□ -1.37
Ciita-201ENSMUST00000023147 Utp20Q5XG71 2788 aaKnown RBP6.48□□□□□ -1.37
Ciita-201ENSMUST00000023147 Gm2310J3QNJ2 377 aa6.48□□□□□ -1.37
Ciita-201ENSMUST00000023147 Gm10382Q3V0T5 144 aa6.48□□□□□ -1.37
Ciita-201ENSMUST00000023147 Muc2Q80Z19 2680 aa6.48□□□□□ -1.37
Ciita-201ENSMUST00000023147 NbeaQ9EPN1 2936 aa6.48□□□□□ -1.37
Ciita-201ENSMUST00000023147 Gm5767A0A0J9YTU8 78 aa6.47□□□□□ -1.37
Ciita-201ENSMUST00000023147 Stab2Q8R4U0 2559 aa6.46□□□□□ -1.37
Ciita-201ENSMUST00000023147 Ubr5Q80TP3 2792 aa6.46□□□□□ -1.38
Ciita-201ENSMUST00000023147 Col6a3E9PWQ3 3284 aa6.45□□□□□ -1.38
Ciita-201ENSMUST00000023147 Gm36176A0A1W2P8D5 158 aa6.43□□□□□ -1.38
Ciita-201ENSMUST00000023147 Vps13cQ8BX70 3748 aa6.41□□□□□ -1.38
Ciita-201ENSMUST00000023147 Dchs1E9PVD3 3291 aa6.39□□□□□ -1.39
Ciita-201ENSMUST00000023147 FlncQ8VHX6 2726 aaKnown RBP6.38□□□□□ -1.39
Ciita-201ENSMUST00000023147 VcanQ62059 3357 aa6.38□□□□□ -1.39
Ciita-201ENSMUST00000023147 RelnQ60841 3461 aa6.37□□□□□ -1.39
Ciita-201ENSMUST00000023147 Gm17349F7BGH6 99 aa6.37□□□□□ -1.39
Ciita-201ENSMUST00000023147 Cox6b2Q80ZN9 88 aa6.36□□□□□ -1.39
Ciita-201ENSMUST00000023147 Pkd1l1Q8R526 2615 aa6.35□□□□□ -1.39
Ciita-201ENSMUST00000023147 Krtap29-1A2A5X4 342 aa6.34□□□□□ -1.39
Ciita-201ENSMUST00000023147 SpegQ62407 3262 aa6.34□□□□□ -1.4
Ciita-201ENSMUST00000023147 Col6a5A6H584 2640 aa6.34□□□□□ -1.4
Ciita-201ENSMUST00000023147 Gm11939A2A592 99 aa6.33□□□□□ -1.4
Ciita-201ENSMUST00000023147 2310050C09RikG5E8Z3 280 aa6.3□□□□□ -1.4
Ciita-201ENSMUST00000023147 Myo15aQ9QZZ4 3511 aa6.3□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms