RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Rhox8Q6VSS7 320 aa18.6■□□□□ 0.57
Ciita-201ENSMUST00000023147 Rpgrip1Q9EPQ2 1331 aa18.02■□□□□ 0.48
Ciita-201ENSMUST00000023147 NischQ80TM9 1593 aa17.88■□□□□ 0.45
Ciita-201ENSMUST00000023147 Cngb1E1AZ71 1325 aa17.21■□□□□ 0.35
Ciita-201ENSMUST00000023147 Abcc9P70170 1546 aa17.12■□□□□ 0.33
Ciita-201ENSMUST00000023147 Rtl1Q7M732 1744 aa17.09■□□□□ 0.33
Ciita-201ENSMUST00000023147 Pelp1Q9DBD5 1123 aaKnown RBP17.03■□□□□ 0.32
Ciita-201ENSMUST00000023147 Ccdc180J3QNE4 1664 aa17.01■□□□□ 0.31
Ciita-201ENSMUST00000023147 Las1lA2BE28 776 aaKnown RBP16.9■□□□□ 0.3
Ciita-201ENSMUST00000023147 Acin1Q9JIX8 1338 aaKnown RBP16.82■□□□□ 0.28
Ciita-201ENSMUST00000023147 Gm35339A0A140LHH9 1649 aa16.72■□□□□ 0.27
Ciita-201ENSMUST00000023147 Ehmt2Q9Z148 1263 aaKnown RBP16.7■□□□□ 0.26
Ciita-201ENSMUST00000023147 Ube2uB1AUC4 352 aa16.68■□□□□ 0.26
Ciita-201ENSMUST00000023147 Abcc8B2RUS7 1588 aa16.65■□□□□ 0.26
Ciita-201ENSMUST00000023147 Wdr66E9Q743 1299 aa16.59■□□□□ 0.25
Ciita-201ENSMUST00000023147 HrcG5E8J6 738 aa16.5■□□□□ 0.23
Ciita-201ENSMUST00000023147 Ccdc136Q3TVA9 1136 aa16.47■□□□□ 0.23
Ciita-201ENSMUST00000023147 Esf1Q3V1V3 845 aaKnown RBP16.43■□□□□ 0.22
Ciita-201ENSMUST00000023147 Trim41Q5NCC3 630 aa16.39■□□□□ 0.21
Ciita-201ENSMUST00000023147 Zeb1Q64318 1117 aa16.37■□□□□ 0.21
Ciita-201ENSMUST00000023147 Amer1Q7TS75 1132 aa16.29■□□□□ 0.2
Ciita-201ENSMUST00000023147 NefmP08553 848 aa16.23■□□□□ 0.19
Ciita-201ENSMUST00000023147 Pcgf6Q99NA9 353 aa16.21■□□□□ 0.19
Ciita-201ENSMUST00000023147 Npm2Q80W85 207 aa16.17■□□□□ 0.18
Ciita-201ENSMUST00000023147 4930567H17RikQ3V0K5 233 aa16.1■□□□□ 0.17
Ciita-201ENSMUST00000023147 Gab3Q8BSM5 595 aa16.05■□□□□ 0.16
Ciita-201ENSMUST00000023147 CenpbP27790 599 aa16■□□□□ 0.15
Ciita-201ENSMUST00000023147 Stra8P70278 393 aa15.98■□□□□ 0.15
Ciita-201ENSMUST00000023147 Dcaf1Q80TR8 1506 aa15.96■□□□□ 0.15
Ciita-201ENSMUST00000023147 Myt1lP97500 1187 aa15.95■□□□□ 0.14
Ciita-201ENSMUST00000023147 Myt1Q8CFC2 1127 aa15.92■□□□□ 0.14
Ciita-201ENSMUST00000023147 Zcchc6Q5BLK4 1491 aaKnown RBP15.77■□□□□ 0.12
Ciita-201ENSMUST00000023147 Supt5hO55201 1082 aaKnown RBP15.77■□□□□ 0.11
Ciita-201ENSMUST00000023147 Rb1cc1Q9ESK9 1588 aa15.71■□□□□ 0.11
Ciita-201ENSMUST00000023147 Slc24a1Q91WD8 1130 aa15.7■□□□□ 0.1
Ciita-201ENSMUST00000023147 Cdk11bP24788 784 aaKnown RBP15.69■□□□□ 0.1
Ciita-201ENSMUST00000023147 Anp32bQ9EST5 272 aaKnown RBP15.64■□□□□ 0.09
Ciita-201ENSMUST00000023147 UbtfP25976 765 aaKnown RBP15.6■□□□□ 0.09
Ciita-201ENSMUST00000023147 Cep164Q5DU05 1446 aa15.57■□□□□ 0.08
Ciita-201ENSMUST00000023147 Nop58Q6DFW4 536 aaKnown RBP15.54■□□□□ 0.08
Ciita-201ENSMUST00000023147 4933416C03RikQ3V063 378 aa15.53■□□□□ 0.08
Ciita-201ENSMUST00000023147 Tnnt3Q9QZ47 272 aa15.52■□□□□ 0.07
Ciita-201ENSMUST00000023147 Baz1aO88379 1555 aa15.51■□□□□ 0.07
Ciita-201ENSMUST00000023147 NrdcQ8BHG1 1161 aa15.49■□□□□ 0.07
Ciita-201ENSMUST00000023147 NeflP08551 543 aa15.47■□□□□ 0.07
Ciita-201ENSMUST00000023147 Mier1Q5UAK0 511 aa15.47■□□□□ 0.07
Ciita-201ENSMUST00000023147 Neurod1Q60867 357 aa15.41■□□□□ 0.06
Ciita-201ENSMUST00000023147 Ttbk1Q6PCN3 1308 aa15.41■□□□□ 0.06
Ciita-201ENSMUST00000023147 Brd4Q9ESU6 1400 aaKnown RBP15.39■□□□□ 0.05
Ciita-201ENSMUST00000023147 NacadQ5SWP3 1504 aa15.38■□□□□ 0.05
Ciita-201ENSMUST00000023147 DiexfQ8BTT6 772 aaKnown RBP15.38■□□□□ 0.05
Ciita-201ENSMUST00000023147 Anks4bQ8K3X6 423 aa15.37■□□□□ 0.05
Ciita-201ENSMUST00000023147 ClspnQ80YR7 1315 aa15.36■□□□□ 0.05
Ciita-201ENSMUST00000023147 Os9Q8K2C7 672 aa15.36■□□□□ 0.05
Ciita-201ENSMUST00000023147 TonslQ6NZL6 1363 aa15.35■□□□□ 0.05
Ciita-201ENSMUST00000023147 Rtl5Q5DTT4 599 aa15.24■□□□□ 0.03
Ciita-201ENSMUST00000023147 Il27Q8K3I6 234 aa15.23■□□□□ 0.03
Ciita-201ENSMUST00000023147 Kdm5dQ62240 1548 aa15.22■□□□□ 0.03
Ciita-201ENSMUST00000023147 Aplp2Q06335 707 aa15.22■□□□□ 0.03
Ciita-201ENSMUST00000023147 Sall2Q9QX96 1004 aa15.22■□□□□ 0.03
Ciita-201ENSMUST00000023147 NclP09405 707 aaKnown RBP15.18■□□□□ 0.02
Ciita-201ENSMUST00000023147 Fam50aQ9WV03 339 aaKnown RBP15.18■□□□□ 0.02
Ciita-201ENSMUST00000023147 Chic1Q8CBW7 227 aa15.14■□□□□ 0.01
Ciita-201ENSMUST00000023147 Eif5bQ05D44 1216 aaKnown RBP15.13■□□□□ 0.01
Ciita-201ENSMUST00000023147 Crybg2B7ZCC2 1516 aa15.12■□□□□ 0.01
Ciita-201ENSMUST00000023147 Golga3P55937 1487 aa15.07■□□□□ 0
Ciita-201ENSMUST00000023147 Csrnp3P59055 597 aa15.06■□□□□ 0
Ciita-201ENSMUST00000023147 Anp32aO35381 247 aa15□□□□□ -0.01
Ciita-201ENSMUST00000023147 ScribQ80U72 1612 aa14.99□□□□□ -0.01
Ciita-201ENSMUST00000023147 Ppargc1bQ8VHJ7 1014 aa14.98□□□□□ -0.01
Ciita-201ENSMUST00000023147 Rsf1E9PWW9 1441 aaKnown RBP14.95□□□□□ -0.02
Ciita-201ENSMUST00000023147 Smarca2Q6DIC0 1577 aa14.95□□□□□ -0.02
Ciita-201ENSMUST00000023147 Gm13697A2AK42 830 aa14.92□□□□□ -0.02
Ciita-201ENSMUST00000023147 Ap3b1Q9Z1T1 1105 aa14.92□□□□□ -0.02
Ciita-201ENSMUST00000023147 1700123L14RikQ3V2K7 440 aa14.91□□□□□ -0.02
Ciita-201ENSMUST00000023147 Clip1Q922J3 1391 aa14.88□□□□□ -0.03
Ciita-201ENSMUST00000023147 Plekhg3Q4VAC9 1341 aa14.85□□□□□ -0.03
Ciita-201ENSMUST00000023147 Npm1Q61937 292 aaKnown RBP14.85□□□□□ -0.03
Ciita-201ENSMUST00000023147 Sycp2Q9CUU3 1500 aa14.82□□□□□ -0.04
Ciita-201ENSMUST00000023147 DaxxO35613 739 aa14.79□□□□□ -0.04
Ciita-201ENSMUST00000023147 Ccer2J3QPU5 274 aa14.79□□□□□ -0.04
Ciita-201ENSMUST00000023147 Hnrnpul2Q00PI9 745 aaKnown RBP14.78□□□□□ -0.04
Ciita-201ENSMUST00000023147 Ccdc88bQ4QRL3 1481 aa14.75□□□□□ -0.05
Ciita-201ENSMUST00000023147 Aebp2Q9Z248 504 aaKnown RBP14.72□□□□□ -0.05
Ciita-201ENSMUST00000023147 Zbtb7cQ8VCZ7 619 aa14.72□□□□□ -0.05
Ciita-201ENSMUST00000023147 Nlrp6Q91WS2 869 aa14.68□□□□□ -0.06
Ciita-201ENSMUST00000023147 Hdac5Q9Z2V6 1113 aa14.68□□□□□ -0.06
Ciita-201ENSMUST00000023147 Atp1b4Q99ME6 356 aa14.67□□□□□ -0.06
Ciita-201ENSMUST00000023147 Gm38655A0A286YDK6 273 aa14.66□□□□□ -0.06
Ciita-201ENSMUST00000023147 Gm13695A2AK44 830 aa14.65□□□□□ -0.06
Ciita-201ENSMUST00000023147 CatipB9EKE5 520 aa14.65□□□□□ -0.06
Ciita-201ENSMUST00000023147 Calr4Q3TQS0 420 aa14.63□□□□□ -0.07
Ciita-201ENSMUST00000023147 Fmn1Q05860 1466 aa14.63□□□□□ -0.07
Ciita-201ENSMUST00000023147 Eid3Q3V124 375 aa14.62□□□□□ -0.07
Ciita-201ENSMUST00000023147 CftrP26361 1476 aa14.61□□□□□ -0.07
Ciita-201ENSMUST00000023147 Polr3glQ8R0C0 218 aa14.59□□□□□ -0.07
Ciita-201ENSMUST00000023147 Ubl4bQ9CQ84 188 aa14.59□□□□□ -0.07
Ciita-201ENSMUST00000023147 Synj1Q8CHC4 1574 aa14.56□□□□□ -0.08
Ciita-201ENSMUST00000023147 Cecr2E9Q2Z1 1453 aa14.56□□□□□ -0.08
Ciita-201ENSMUST00000023147 Ercc6F8VPZ5 1481 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 9.9 ms