RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gm43218A0A0G2JGT0 114 aa11,41□□□□□ -0,58
Col17a1-201ENSMUST00000026045 Epg5Q80TA9 2572 aa11,4□□□□□ -0,59
Col17a1-201ENSMUST00000026045 Igkv8-28A0A0G2JE47 121 aa11,39□□□□□ -0,59
Col17a1-201ENSMUST00000026045 PolqQ8CGS6 2544 aa11,39□□□□□ -0,59
Col17a1-201ENSMUST00000026045 Rpl37aP61514 92 aa11,35□□□□□ -0,59
Col17a1-201ENSMUST00000026045 Uqcr11Q9CPX8 56 aa11,35□□□□□ -0,59
Col17a1-201ENSMUST00000026045 Gm16485Q8C4B7 115 aa11,35□□□□□ -0,59
Col17a1-201ENSMUST00000026045 Krtap26-1Q9D7N2 215 aa11,35□□□□□ -0,59
Col17a1-201ENSMUST00000026045 Gm3250E9Q1M3 230 aa11,34□□□□□ -0,59
Col17a1-201ENSMUST00000026045 A930002H24RikQ8C8Y3 163 aa11,33□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Gm10999F6Q4M4 69 aa11,33□□□□□ -0,6
Col17a1-201ENSMUST00000026045 AplnQ9R0R4 77 aa11,32□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Phxr5P08399 672 aa11,32□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Tnrc18Q80WC3 2878 aa11,31□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Q8BT88 171 aa11,3□□□□□ -0,6
Col17a1-201ENSMUST00000026045 HttP42859 3119 aa11,3□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Dmac1Q9CQ00 111 aa11,29□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Q8BGJ3 129 aa11,29□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Defb10Q8R2I8 73 aa11,29□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Myo18bE9PV66 2605 aa11,29□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Col12a1Q60847 3120 aa11,29□□□□□ -0,6
Col17a1-201ENSMUST00000026045 A330070K13RikQ8CA53 115 aa11,28□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Unc79Q0KK59 2596 aa11,28□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Gm10837Q3UTT8 145 aa11,28□□□□□ -0,6
Col17a1-201ENSMUST00000026045 Krtap24-1G3X9A2 248 aa11,27□□□□□ -0,61
Col17a1-201ENSMUST00000026045 Gm7173A0A0G2JEB6 3132 aa11,27□□□□□ -0,61
Col17a1-201ENSMUST00000026045 Defb50Q6TU36 73 aa11,24□□□□□ -0,61
Col17a1-201ENSMUST00000026045 Chd7A2AJK6 2986 aaKnown RBP11,22□□□□□ -0,61
Col17a1-201ENSMUST00000026045 Defb1P56386 69 aa11,2□□□□□ -0,62
Col17a1-201ENSMUST00000026045 Dmbt1Q60997 2085 aa11,19□□□□□ -0,62
Col17a1-201ENSMUST00000026045 Cep192E9Q4Y4 2514 aaKnown RBP11,19□□□□□ -0,62
Col17a1-201ENSMUST00000026045 Gm11627A6PWP4 55 aa11,19□□□□□ -0,62
Col17a1-201ENSMUST00000026045 Gm10772F7AIG4 85 aa11,18□□□□□ -0,62
Col17a1-201ENSMUST00000026045 Chtf8P0CG14 533 aa11,18□□□□□ -0,62
Col17a1-201ENSMUST00000026045 RetnlbQ99P86 105 aa11,18□□□□□ -0,62
Col17a1-201ENSMUST00000026045 Gm17606F6ZL36 78 aa11,17□□□□□ -0,62
Col17a1-201ENSMUST00000026045 Cystm1Q8K353 104 aa11,17□□□□□ -0,62
Col17a1-201ENSMUST00000026045 Defb39Q70KL3 74 aa11,17□□□□□ -0,62
Col17a1-201ENSMUST00000026045 SmcpP15265 143 aa11,17□□□□□ -0,62
Col17a1-201ENSMUST00000026045 Adm2Q7TNK8 150 aa11,16□□□□□ -0,62
Col17a1-201ENSMUST00000026045 4930507D05RikQ8C9C9 103 aa11,13□□□□□ -0,63
Col17a1-201ENSMUST00000026045 1600014C23RikQ9DAX4 101 aa11,13□□□□□ -0,63
Col17a1-201ENSMUST00000026045 Ly6g6cQ9Z1Q4 126 aa11,12□□□□□ -0,63
Col17a1-201ENSMUST00000026045 Cfap54Q8C6S9 3106 aa11,12□□□□□ -0,63
Col17a1-201ENSMUST00000026045 Ankrd17Q99NH0 2603 aaKnown RBP11,12□□□□□ -0,63
Col17a1-201ENSMUST00000026045 E130208F15RikQ3UPV3 143 aa11,12□□□□□ -0,63
Col17a1-201ENSMUST00000026045 Psors1c2Q80ZC9 134 aa11,12□□□□□ -0,63
Col17a1-201ENSMUST00000026045 AY074887Q8R5F9 132 aa11,12□□□□□ -0,63
Col17a1-201ENSMUST00000026045 Gm16181B0V2H2 73 aa11,11□□□□□ -0,63
Col17a1-201ENSMUST00000026045 Snhg11Q4G0K9 87 aa11,1□□□□□ -0,63
Col17a1-201ENSMUST00000026045 Gm26620Q9CY65 116 aa11,1□□□□□ -0,63
Col17a1-201ENSMUST00000026045 Cdh23Q99PF4 3354 aa11,09□□□□□ -0,63
Col17a1-201ENSMUST00000026045 Cypt15B1AXS0 87 aa11,09□□□□□ -0,63
Col17a1-201ENSMUST00000026045 Rev3lQ61493 3122 aa11,06□□□□□ -0,64
Col17a1-201ENSMUST00000026045 Bod1lE9Q6J5 3032 aa11,06□□□□□ -0,64
Col17a1-201ENSMUST00000026045 Prrc2cQ3TLH4 2846 aaKnown RBP11,06□□□□□ -0,64
Col17a1-201ENSMUST00000026045 Lypd5Q9D7Z7 256 aa11,04□□□□□ -0,64
Col17a1-201ENSMUST00000026045 Rnase13Q5GAM7 153 aa11,04□□□□□ -0,64
Col17a1-201ENSMUST00000026045 Prol1E9PYQ4 312 aa11,03□□□□□ -0,64
Col17a1-201ENSMUST00000026045 Gm10642Q3TWM1 71 aa11,03□□□□□ -0,64
Col17a1-201ENSMUST00000026045 Gm3646F6S692 53 aa11,02□□□□□ -0,64
Col17a1-201ENSMUST00000026045 Lelp1Q9DAE3 120 aa11,01□□□□□ -0,65
Col17a1-201ENSMUST00000026045 1700042G07RikB1AUF7 90 aa11,01□□□□□ -0,65
Col17a1-201ENSMUST00000026045 Gcn1E9PVA8 2671 aaKnown RBP11,01□□□□□ -0,65
Col17a1-201ENSMUST00000026045 Usp9yF8VPU6 2556 aa10,99□□□□□ -0,65
Col17a1-201ENSMUST00000026045 Gm7276Q3TYW4 209 aa10,99□□□□□ -0,65
Col17a1-201ENSMUST00000026045 Pla2g10Q9QXX3 151 aa10,98□□□□□ -0,65
Col17a1-201ENSMUST00000026045 Krtap11-1E9Q2E9 183 aa10,98□□□□□ -0,65
Col17a1-201ENSMUST00000026045 Sprr1bQ62267 153 aa10,98□□□□□ -0,65
Col17a1-201ENSMUST00000026045 Nbeal1E9PYP2 2688 aa10,98□□□□□ -0,65
Col17a1-201ENSMUST00000026045 C530025M09RikF6RGA8 229 aa10,97□□□□□ -0,65
Col17a1-201ENSMUST00000026045 Gm9821Q8K076 103 aa10,96□□□□□ -0,66
Col17a1-201ENSMUST00000026045 Gm3233E9Q2H5 230 aa10,95□□□□□ -0,66
Col17a1-201ENSMUST00000026045 Ranbp2Q9ERU9 3053 aaKnown RBP10,94□□□□□ -0,66
Col17a1-201ENSMUST00000026045 Fam168bQ80XQ8 194 aa10,92□□□□□ -0,66
Col17a1-201ENSMUST00000026045 Map1aQ9QYR6 2776 aa10,92□□□□□ -0,66
Col17a1-201ENSMUST00000026045 Phf5aP83870 110 aaKnown RBP10,92□□□□□ -0,66
Col17a1-201ENSMUST00000026045 Sprr4Q8CGN8 76 aa10,9□□□□□ -0,66
Col17a1-201ENSMUST00000026045 CicQ924A2 2510 aa10,9□□□□□ -0,67
Col17a1-201ENSMUST00000026045 Smim29Q8R043 75 aa10,88□□□□□ -0,67
Col17a1-201ENSMUST00000026045 Vps13aQ5H8C4 3166 aa10,87□□□□□ -0,67
Col17a1-201ENSMUST00000026045 FlnaQ8BTM8 2647 aaKnown RBP10,87□□□□□ -0,67
Col17a1-201ENSMUST00000026045 4933415A04RikQ9D443 101 aa10,87□□□□□ -0,67
Col17a1-201ENSMUST00000026045 Szt2A2A9C3 3431 aa10,85□□□□□ -0,67
Col17a1-201ENSMUST00000026045 Itpr1P11881 2749 aa10,85□□□□□ -0,67
Col17a1-201ENSMUST00000026045 Myo15bI7HPW8 3033 aa10,84□□□□□ -0,67
Col17a1-201ENSMUST00000026045 Gm27235Q3UW50 83 aa10,84□□□□□ -0,67
Col17a1-201ENSMUST00000026045 FlnbQ80X90 2602 aaKnown RBP10,84□□□□□ -0,67
Col17a1-201ENSMUST00000026045 Spata3Q9D9T6 193 aa10,83□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Ankrd11E9Q4F7 2643 aa10,83□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Gm9195A0A140LHT4 2805 aa10,83□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Dmxl1Q6PNC0 3013 aa10,83□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Gm21798J3QNU5 87 aa10,82□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Fbn2Q61555 2907 aa10,82□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Hectd1Q69ZR2 2618 aaKnown RBP10,82□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Gm20538F6Z9R1 75 aa10,82□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Spaca4Q80ZQ0 127 aa10,81□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Gm3880A0A1B0GSB3 72 aa10,8□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Cypt14J3QPF7 87 aa10,8□□□□□ -0,68
Col17a1-201ENSMUST00000026045 Gm10320E9PW43 113 aa10,79□□□□□ -0,68
Retrieved 100 of 22,080 RNA–protein pairs in 55,2 ms