RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gm43218A0A0G2JGT0 114 aa11.41□□□□□ -0.58
Col17a1-201ENSMUST00000026045 Epg5Q80TA9 2572 aa11.4□□□□□ -0.59
Col17a1-201ENSMUST00000026045 Igkv8-28A0A0G2JE47 121 aa11.39□□□□□ -0.59
Col17a1-201ENSMUST00000026045 PolqQ8CGS6 2544 aa11.39□□□□□ -0.59
Col17a1-201ENSMUST00000026045 Rpl37aP61514 92 aa11.35□□□□□ -0.59
Col17a1-201ENSMUST00000026045 Uqcr11Q9CPX8 56 aa11.35□□□□□ -0.59
Col17a1-201ENSMUST00000026045 Gm16485Q8C4B7 115 aa11.35□□□□□ -0.59
Col17a1-201ENSMUST00000026045 Krtap26-1Q9D7N2 215 aa11.35□□□□□ -0.59
Col17a1-201ENSMUST00000026045 Gm3250E9Q1M3 230 aa11.34□□□□□ -0.59
Col17a1-201ENSMUST00000026045 A930002H24RikQ8C8Y3 163 aa11.33□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Gm10999F6Q4M4 69 aa11.33□□□□□ -0.6
Col17a1-201ENSMUST00000026045 AplnQ9R0R4 77 aa11.32□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Phxr5P08399 672 aa11.32□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Tnrc18Q80WC3 2878 aa11.31□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Q8BT88 171 aa11.3□□□□□ -0.6
Col17a1-201ENSMUST00000026045 HttP42859 3119 aa11.3□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Dmac1Q9CQ00 111 aa11.29□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Q8BGJ3 129 aa11.29□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Defb10Q8R2I8 73 aa11.29□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Myo18bE9PV66 2605 aa11.29□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Col12a1Q60847 3120 aa11.29□□□□□ -0.6
Col17a1-201ENSMUST00000026045 A330070K13RikQ8CA53 115 aa11.28□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Unc79Q0KK59 2596 aa11.28□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Gm10837Q3UTT8 145 aa11.28□□□□□ -0.6
Col17a1-201ENSMUST00000026045 Krtap24-1G3X9A2 248 aa11.27□□□□□ -0.61
Col17a1-201ENSMUST00000026045 Gm7173A0A0G2JEB6 3132 aa11.27□□□□□ -0.61
Col17a1-201ENSMUST00000026045 Defb50Q6TU36 73 aa11.24□□□□□ -0.61
Col17a1-201ENSMUST00000026045 Chd7A2AJK6 2986 aaKnown RBP11.22□□□□□ -0.61
Col17a1-201ENSMUST00000026045 Defb1P56386 69 aa11.2□□□□□ -0.62
Col17a1-201ENSMUST00000026045 Dmbt1Q60997 2085 aa11.19□□□□□ -0.62
Col17a1-201ENSMUST00000026045 Cep192E9Q4Y4 2514 aaKnown RBP11.19□□□□□ -0.62
Col17a1-201ENSMUST00000026045 Gm11627A6PWP4 55 aa11.19□□□□□ -0.62
Col17a1-201ENSMUST00000026045 Gm10772F7AIG4 85 aa11.18□□□□□ -0.62
Col17a1-201ENSMUST00000026045 Chtf8P0CG14 533 aa11.18□□□□□ -0.62
Col17a1-201ENSMUST00000026045 RetnlbQ99P86 105 aa11.18□□□□□ -0.62
Col17a1-201ENSMUST00000026045 Gm17606F6ZL36 78 aa11.17□□□□□ -0.62
Col17a1-201ENSMUST00000026045 Cystm1Q8K353 104 aa11.17□□□□□ -0.62
Col17a1-201ENSMUST00000026045 Defb39Q70KL3 74 aa11.17□□□□□ -0.62
Col17a1-201ENSMUST00000026045 SmcpP15265 143 aa11.17□□□□□ -0.62
Col17a1-201ENSMUST00000026045 Adm2Q7TNK8 150 aa11.16□□□□□ -0.62
Col17a1-201ENSMUST00000026045 4930507D05RikQ8C9C9 103 aa11.13□□□□□ -0.63
Col17a1-201ENSMUST00000026045 1600014C23RikQ9DAX4 101 aa11.13□□□□□ -0.63
Col17a1-201ENSMUST00000026045 Ly6g6cQ9Z1Q4 126 aa11.12□□□□□ -0.63
Col17a1-201ENSMUST00000026045 Cfap54Q8C6S9 3106 aa11.12□□□□□ -0.63
Col17a1-201ENSMUST00000026045 Ankrd17Q99NH0 2603 aaKnown RBP11.12□□□□□ -0.63
Col17a1-201ENSMUST00000026045 E130208F15RikQ3UPV3 143 aa11.12□□□□□ -0.63
Col17a1-201ENSMUST00000026045 Psors1c2Q80ZC9 134 aa11.12□□□□□ -0.63
Col17a1-201ENSMUST00000026045 AY074887Q8R5F9 132 aa11.12□□□□□ -0.63
Col17a1-201ENSMUST00000026045 Gm16181B0V2H2 73 aa11.11□□□□□ -0.63
Col17a1-201ENSMUST00000026045 Snhg11Q4G0K9 87 aa11.1□□□□□ -0.63
Col17a1-201ENSMUST00000026045 Gm26620Q9CY65 116 aa11.1□□□□□ -0.63
Col17a1-201ENSMUST00000026045 Cdh23Q99PF4 3354 aa11.09□□□□□ -0.63
Col17a1-201ENSMUST00000026045 Cypt15B1AXS0 87 aa11.09□□□□□ -0.63
Col17a1-201ENSMUST00000026045 Rev3lQ61493 3122 aa11.06□□□□□ -0.64
Col17a1-201ENSMUST00000026045 Bod1lE9Q6J5 3032 aa11.06□□□□□ -0.64
Col17a1-201ENSMUST00000026045 Prrc2cQ3TLH4 2846 aaKnown RBP11.06□□□□□ -0.64
Col17a1-201ENSMUST00000026045 Lypd5Q9D7Z7 256 aa11.04□□□□□ -0.64
Col17a1-201ENSMUST00000026045 Rnase13Q5GAM7 153 aa11.04□□□□□ -0.64
Col17a1-201ENSMUST00000026045 Prol1E9PYQ4 312 aa11.03□□□□□ -0.64
Col17a1-201ENSMUST00000026045 Gm10642Q3TWM1 71 aa11.03□□□□□ -0.64
Col17a1-201ENSMUST00000026045 Gm3646F6S692 53 aa11.02□□□□□ -0.64
Col17a1-201ENSMUST00000026045 Lelp1Q9DAE3 120 aa11.01□□□□□ -0.65
Col17a1-201ENSMUST00000026045 1700042G07RikB1AUF7 90 aa11.01□□□□□ -0.65
Col17a1-201ENSMUST00000026045 Gcn1E9PVA8 2671 aaKnown RBP11.01□□□□□ -0.65
Col17a1-201ENSMUST00000026045 Usp9yF8VPU6 2556 aa10.99□□□□□ -0.65
Col17a1-201ENSMUST00000026045 Gm7276Q3TYW4 209 aa10.99□□□□□ -0.65
Col17a1-201ENSMUST00000026045 Pla2g10Q9QXX3 151 aa10.98□□□□□ -0.65
Col17a1-201ENSMUST00000026045 Krtap11-1E9Q2E9 183 aa10.98□□□□□ -0.65
Col17a1-201ENSMUST00000026045 Sprr1bQ62267 153 aa10.98□□□□□ -0.65
Col17a1-201ENSMUST00000026045 Nbeal1E9PYP2 2688 aa10.98□□□□□ -0.65
Col17a1-201ENSMUST00000026045 C530025M09RikF6RGA8 229 aa10.97□□□□□ -0.65
Col17a1-201ENSMUST00000026045 Gm9821Q8K076 103 aa10.96□□□□□ -0.66
Col17a1-201ENSMUST00000026045 Gm3233E9Q2H5 230 aa10.95□□□□□ -0.66
Col17a1-201ENSMUST00000026045 Ranbp2Q9ERU9 3053 aaKnown RBP10.94□□□□□ -0.66
Col17a1-201ENSMUST00000026045 Fam168bQ80XQ8 194 aa10.92□□□□□ -0.66
Col17a1-201ENSMUST00000026045 Map1aQ9QYR6 2776 aa10.92□□□□□ -0.66
Col17a1-201ENSMUST00000026045 Phf5aP83870 110 aaKnown RBP10.92□□□□□ -0.66
Col17a1-201ENSMUST00000026045 Sprr4Q8CGN8 76 aa10.9□□□□□ -0.66
Col17a1-201ENSMUST00000026045 CicQ924A2 2510 aa10.9□□□□□ -0.67
Col17a1-201ENSMUST00000026045 Smim29Q8R043 75 aa10.88□□□□□ -0.67
Col17a1-201ENSMUST00000026045 Vps13aQ5H8C4 3166 aa10.87□□□□□ -0.67
Col17a1-201ENSMUST00000026045 FlnaQ8BTM8 2647 aaKnown RBP10.87□□□□□ -0.67
Col17a1-201ENSMUST00000026045 4933415A04RikQ9D443 101 aa10.87□□□□□ -0.67
Col17a1-201ENSMUST00000026045 Szt2A2A9C3 3431 aa10.85□□□□□ -0.67
Col17a1-201ENSMUST00000026045 Itpr1P11881 2749 aa10.85□□□□□ -0.67
Col17a1-201ENSMUST00000026045 Myo15bI7HPW8 3033 aa10.84□□□□□ -0.67
Col17a1-201ENSMUST00000026045 Gm27235Q3UW50 83 aa10.84□□□□□ -0.67
Col17a1-201ENSMUST00000026045 FlnbQ80X90 2602 aaKnown RBP10.84□□□□□ -0.67
Col17a1-201ENSMUST00000026045 Spata3Q9D9T6 193 aa10.83□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Ankrd11E9Q4F7 2643 aa10.83□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Gm9195A0A140LHT4 2805 aa10.83□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Dmxl1Q6PNC0 3013 aa10.83□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Gm21798J3QNU5 87 aa10.82□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Fbn2Q61555 2907 aa10.82□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Hectd1Q69ZR2 2618 aaKnown RBP10.82□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Gm20538F6Z9R1 75 aa10.82□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Spaca4Q80ZQ0 127 aa10.81□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Gm3880A0A1B0GSB3 72 aa10.8□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Cypt14J3QPF7 87 aa10.8□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Gm10320E9PW43 113 aa10.79□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 205 ms