RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Rhox8Q6VSS7 320 aa29,17■■■□□ 2,26
Col17a1-201ENSMUST00000026045 Rpgrip1Q9EPQ2 1331 aa28,16■■■□□ 2,1
Col17a1-201ENSMUST00000026045 Las1lA2BE28 776 aaKnown RBP27,49■■□□□ 1,99
Col17a1-201ENSMUST00000026045 Cngb1E1AZ71 1325 aa27,03■■□□□ 1,92
Col17a1-201ENSMUST00000026045 Ehmt2Q9Z148 1263 aaKnown RBP26,58■■□□□ 1,85
Col17a1-201ENSMUST00000026045 NischQ80TM9 1593 aa26,55■■□□□ 1,84
Col17a1-201ENSMUST00000026045 Pelp1Q9DBD5 1123 aaKnown RBP26,3■■□□□ 1,8
Col17a1-201ENSMUST00000026045 Ccdc136Q3TVA9 1136 aa26,2■■□□□ 1,78
Col17a1-201ENSMUST00000026045 CenpbP27790 599 aa26,11■■□□□ 1,77
Col17a1-201ENSMUST00000026045 Myt1Q8CFC2 1127 aa25,99■■□□□ 1,75
Col17a1-201ENSMUST00000026045 Wdr66E9Q743 1299 aa25,89■■□□□ 1,74
Col17a1-201ENSMUST00000026045 Zeb1Q64318 1117 aa25,85■■□□□ 1,73
Col17a1-201ENSMUST00000026045 Amer1Q7TS75 1132 aa25,79■■□□□ 1,72
Col17a1-201ENSMUST00000026045 Acin1Q9JIX8 1338 aaKnown RBP25,77■■□□□ 1,72
Col17a1-201ENSMUST00000026045 Esf1Q3V1V3 845 aaKnown RBP25,59■■□□□ 1,69
Col17a1-201ENSMUST00000026045 Gab3Q8BSM5 595 aa25,49■■□□□ 1,67
Col17a1-201ENSMUST00000026045 Pcgf6Q99NA9 353 aa25,47■■□□□ 1,67
Col17a1-201ENSMUST00000026045 Trim41Q5NCC3 630 aa25,46■■□□□ 1,67
Col17a1-201ENSMUST00000026045 DiexfQ8BTT6 772 aaKnown RBP25,4■■□□□ 1,66
Col17a1-201ENSMUST00000026045 Npm2Q80W85 207 aa24,98■■□□□ 1,59
Col17a1-201ENSMUST00000026045 Ttbk1Q6PCN3 1308 aa24,97■■□□□ 1,59
Col17a1-201ENSMUST00000026045 Ccdc180J3QNE4 1664 aa24,94■■□□□ 1,58
Col17a1-201ENSMUST00000026045 Myt1lP97500 1187 aa24,92■■□□□ 1,58
Col17a1-201ENSMUST00000026045 Abcc9P70170 1546 aa24,9■■□□□ 1,58
Col17a1-201ENSMUST00000026045 NefmP08553 848 aa24,88■■□□□ 1,57
Col17a1-201ENSMUST00000026045 Cdk11bP24788 784 aaKnown RBP24,85■■□□□ 1,57
Col17a1-201ENSMUST00000026045 Ube2uB1AUC4 352 aa24,74■■□□□ 1,55
Col17a1-201ENSMUST00000026045 Rtl1Q7M732 1744 aa24,71■■□□□ 1,55
Col17a1-201ENSMUST00000026045 Supt5hO55201 1082 aaKnown RBP24,67■■□□□ 1,54
Col17a1-201ENSMUST00000026045 HrcG5E8J6 738 aa24,67■■□□□ 1,54
Col17a1-201ENSMUST00000026045 Stra8P70278 393 aa24,63■■□□□ 1,53
Col17a1-201ENSMUST00000026045 4930567H17RikQ3V0K5 233 aa24,57■■□□□ 1,52
Col17a1-201ENSMUST00000026045 4933416C03RikQ3V063 378 aa24,56■■□□□ 1,52
Col17a1-201ENSMUST00000026045 UbtfP25976 765 aaKnown RBP24,54■■□□□ 1,52
Col17a1-201ENSMUST00000026045 Nop58Q6DFW4 536 aaKnown RBP24,5■■□□□ 1,51
Col17a1-201ENSMUST00000026045 Tnnt3Q9QZ47 272 aa24,47■■□□□ 1,51
Col17a1-201ENSMUST00000026045 Rtl5Q5DTT4 599 aa24,46■■□□□ 1,51
Col17a1-201ENSMUST00000026045 Zcchc6Q5BLK4 1491 aaKnown RBP24,4■■□□□ 1,5
Col17a1-201ENSMUST00000026045 Abcc8B2RUS7 1588 aa24,35■■□□□ 1,49
Col17a1-201ENSMUST00000026045 Neurod1Q60867 357 aa24,3■■□□□ 1,48
Col17a1-201ENSMUST00000026045 Slc24a1Q91WD8 1130 aa24,22■■□□□ 1,47
Col17a1-201ENSMUST00000026045 Gm35339A0A140LHH9 1649 aa24,19■■□□□ 1,46
Col17a1-201ENSMUST00000026045 Il27Q8K3I6 234 aa24,14■■□□□ 1,45
Col17a1-201ENSMUST00000026045 Csrnp3P59055 597 aa24,01■■□□□ 1,43
Col17a1-201ENSMUST00000026045 Aplp2Q06335 707 aa23,96■■□□□ 1,43
Col17a1-201ENSMUST00000026045 Anks4bQ8K3X6 423 aa23,92■■□□□ 1,42
Col17a1-201ENSMUST00000026045 Ppargc1bQ8VHJ7 1014 aa23,91■■□□□ 1,42
Col17a1-201ENSMUST00000026045 Anp32aO35381 247 aa23,9■■□□□ 1,42
Col17a1-201ENSMUST00000026045 Gm38655A0A286YDK6 273 aa23,86■■□□□ 1,41
Col17a1-201ENSMUST00000026045 Ap3b1Q9Z1T1 1105 aa23,85■■□□□ 1,41
Col17a1-201ENSMUST00000026045 Eif5bQ05D44 1216 aaKnown RBP23,7■■□□□ 1,38
Col17a1-201ENSMUST00000026045 Bcl11aQ9QYE3 773 aa23,69■■□□□ 1,38
Col17a1-201ENSMUST00000026045 Fam50aQ9WV03 339 aaKnown RBP23,68■■□□□ 1,38
Col17a1-201ENSMUST00000026045 DaxxO35613 739 aa23,66■■□□□ 1,38
Col17a1-201ENSMUST00000026045 1700123L14RikQ3V2K7 440 aa23,66■■□□□ 1,38
Col17a1-201ENSMUST00000026045 Mier1Q5UAK0 511 aa23,65■■□□□ 1,38
Col17a1-201ENSMUST00000026045 NrdcQ8BHG1 1161 aa23,57■■□□□ 1,36
Col17a1-201ENSMUST00000026045 NeflP08551 543 aa23,56■■□□□ 1,36
Col17a1-201ENSMUST00000026045 ClspnQ80YR7 1315 aa23,5■■□□□ 1,35
Col17a1-201ENSMUST00000026045 NclP09405 707 aaKnown RBP23,49■■□□□ 1,35
Col17a1-201ENSMUST00000026045 TonslQ6NZL6 1363 aa23,48■■□□□ 1,35
Col17a1-201ENSMUST00000026045 Sall2Q9QX96 1004 aa23,44■■□□□ 1,34
Col17a1-201ENSMUST00000026045 Rb1cc1Q9ESK9 1588 aa23,38■■□□□ 1,33
Col17a1-201ENSMUST00000026045 Plekhg3Q4VAC9 1341 aa23,35■■□□□ 1,33
Col17a1-201ENSMUST00000026045 Chic1Q8CBW7 227 aa23,33■■□□□ 1,32
Col17a1-201ENSMUST00000026045 Dcaf1Q80TR8 1506 aa23,31■■□□□ 1,32
Col17a1-201ENSMUST00000026045 Ccdc9Q8VC31 543 aaKnown RBP23,29■■□□□ 1,32
Col17a1-201ENSMUST00000026045 Ythdc1E9Q5K9 736 aaKnown RBP23,26■■□□□ 1,31
Col17a1-201ENSMUST00000026045 Brd4Q9ESU6 1400 aaKnown RBP23,25■■□□□ 1,31
Col17a1-201ENSMUST00000026045 Cep164Q5DU05 1446 aa23,25■■□□□ 1,31
Col17a1-201ENSMUST00000026045 Lmod2Q3UHZ5 550 aa23,21■■□□□ 1,31
Col17a1-201ENSMUST00000026045 Fam71e1A1L3C1 212 aa23,2■■□□□ 1,3
Col17a1-201ENSMUST00000026045 Npm1Q61937 292 aaKnown RBP23,13■■□□□ 1,29
Col17a1-201ENSMUST00000026045 Mapk8ip2Q9ERE9 830 aa23,13■■□□□ 1,29
Col17a1-201ENSMUST00000026045 Anp32bQ9EST5 272 aaKnown RBP23,13■■□□□ 1,29
Col17a1-201ENSMUST00000026045 Hsp90aa1P07901 733 aaKnown RBP23,08■■□□□ 1,28
Col17a1-201ENSMUST00000026045 Calr4Q3TQS0 420 aa22,98■■□□□ 1,27
Col17a1-201ENSMUST00000026045 Ppp4r2Q0VGB7 417 aa22,96■■□□□ 1,27
Col17a1-201ENSMUST00000026045 Clip1Q922J3 1391 aa22,96■■□□□ 1,27
Col17a1-201ENSMUST00000026045 Eid3Q3V124 375 aa22,95■■□□□ 1,27
Col17a1-201ENSMUST00000026045 Os9Q8K2C7 672 aa22,91■■□□□ 1,26
Col17a1-201ENSMUST00000026045 NacadQ5SWP3 1504 aa22,86■■□□□ 1,25
Col17a1-201ENSMUST00000026045 Zbtb7cQ8VCZ7 619 aa22,85■■□□□ 1,25
Col17a1-201ENSMUST00000026045 Baz1aO88379 1555 aa22,82■■□□□ 1,24
Col17a1-201ENSMUST00000026045 Wdr43Q6ZQL4 677 aaKnown RBP22,82■■□□□ 1,24
Col17a1-201ENSMUST00000026045 Irx3P81067 507 aa22,76■■□□□ 1,23
Col17a1-201ENSMUST00000026045 Ccdc27Q3V036 639 aa22,76■■□□□ 1,23
Col17a1-201ENSMUST00000026045 Lmod3E9QA62 571 aa22,66■■□□□ 1,22
Col17a1-201ENSMUST00000026045 Hnrnpul2Q00PI9 745 aaKnown RBP22,63■■□□□ 1,21
Col17a1-201ENSMUST00000026045 ArxO35085 564 aa22,61■■□□□ 1,21
Col17a1-201ENSMUST00000026045 Zbtb4Q5F293 982 aa22,59■■□□□ 1,21
Col17a1-201ENSMUST00000026045 Golga3P55937 1487 aa22,58■■□□□ 1,21
Col17a1-201ENSMUST00000026045 PrkcshO08795 521 aa22,54■■□□□ 1,2
Col17a1-201ENSMUST00000026045 Ubl4bQ9CQ84 188 aa22,53■■□□□ 1,2
Col17a1-201ENSMUST00000026045 Kdm5dQ62240 1548 aa22,53■■□□□ 1,2
Col17a1-201ENSMUST00000026045 CatipB9EKE5 520 aa22,52■■□□□ 1,2
Col17a1-201ENSMUST00000026045 Ifnlr1Q8CGK5 535 aa22,5■■□□□ 1,19
Col17a1-201ENSMUST00000026045 Fkbp15Q6P9Q6 1216 aaKnown RBP22,47■■□□□ 1,19
Col17a1-201ENSMUST00000026045 Pknox2Q8BG99 474 aa22,46■■□□□ 1,19
Col17a1-201ENSMUST00000026045 Rsf1E9PWW9 1441 aaKnown RBP22,45■■□□□ 1,18
Retrieved 100 of 22,080 RNA–protein pairs in 10,8 ms