Protein–RNA interactions for Protein: A6PWP4

Gm11627, MCG21374, isoform CRA_a, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11627A6PWP4 Gm25239-201ENSMUST00000174915 86 ntBASIC23.25■■□□□ 1.31
Gm11627A6PWP4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm11627A6PWP4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm11627A6PWP4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Gm11627A6PWP4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm11627A6PWP4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11627A6PWP4 Gm15042-201ENSMUST00000120212 883 ntBASIC20.79■□□□□ 0.92
Gm11627A6PWP4 Psd-208ENSMUST00000224556 2034 ntBASIC20.63■□□□□ 0.89
Gm11627A6PWP4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm11627A6PWP4 Gm15045-201ENSMUST00000117359 883 ntBASIC20.36■□□□□ 0.85
Gm11627A6PWP4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11627A6PWP4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11627A6PWP4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.16■□□□□ 0.82
Gm11627A6PWP4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11627A6PWP4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11627A6PWP4 Gm24109-201ENSMUST00000175489 103 ntBASIC19.91■□□□□ 0.78
Gm11627A6PWP4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm11627A6PWP4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm11627A6PWP4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm11627A6PWP4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm11627A6PWP4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm11627A6PWP4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm11627A6PWP4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm11627A6PWP4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.62■□□□□ 0.73
Gm11627A6PWP4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm11627A6PWP4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm11627A6PWP4 Gm23366-201ENSMUST00000175022 89 ntBASIC19.53■□□□□ 0.72
Gm11627A6PWP4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm11627A6PWP4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm11627A6PWP4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm11627A6PWP4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm11627A6PWP4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.46■□□□□ 0.71
Gm11627A6PWP4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm11627A6PWP4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm11627A6PWP4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm11627A6PWP4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm11627A6PWP4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.17■□□□□ 0.66
Gm11627A6PWP4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11627A6PWP4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm11627A6PWP4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11627A6PWP4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Gm11627A6PWP4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.07■□□□□ 0.64
Gm11627A6PWP4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm11627A6PWP4 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.01■□□□□ 0.63
Gm11627A6PWP4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.99■□□□□ 0.63
Gm11627A6PWP4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm11627A6PWP4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm11627A6PWP4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm11627A6PWP4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm11627A6PWP4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Gm11627A6PWP4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11627A6PWP4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11627A6PWP4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11627A6PWP4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11627A6PWP4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.55■□□□□ 0.56
Gm11627A6PWP4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11627A6PWP4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11627A6PWP4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Gm11627A6PWP4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11627A6PWP4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Gm11627A6PWP4 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.41■□□□□ 0.54
Gm11627A6PWP4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11627A6PWP4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11627A6PWP4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.36■□□□□ 0.53
Gm11627A6PWP4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.33■□□□□ 0.53
Gm11627A6PWP4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm11627A6PWP4 Gm27325-201ENSMUST00000175467 74 ntBASIC18.3■□□□□ 0.52
Gm11627A6PWP4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11627A6PWP4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11627A6PWP4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm11627A6PWP4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11627A6PWP4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.21■□□□□ 0.51
Gm11627A6PWP4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11627A6PWP4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11627A6PWP4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11627A6PWP4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Gm11627A6PWP4 Gm25238-201ENSMUST00000174914 89 ntBASIC18.17■□□□□ 0.5
Gm11627A6PWP4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11627A6PWP4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11627A6PWP4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11627A6PWP4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Gm11627A6PWP4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.1■□□□□ 0.49
Gm11627A6PWP4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm11627A6PWP4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11627A6PWP4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm11627A6PWP4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm11627A6PWP4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm11627A6PWP4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm11627A6PWP4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm11627A6PWP4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm11627A6PWP4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm11627A6PWP4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm11627A6PWP4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Gm11627A6PWP4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm11627A6PWP4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm11627A6PWP4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm11627A6PWP4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.92■□□□□ 0.46
Gm11627A6PWP4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm11627A6PWP4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gm11627A6PWP4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms