RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 UqcrqQ9CQ69 82 aa15.17■□□□□ 0.02
Smarcc1-201ENSMUST00000088716 Gm43218A0A0G2JGT0 114 aa15.14■□□□□ 0.01
Smarcc1-201ENSMUST00000088716 Cd164Q9R0L9 197 aa15.14■□□□□ 0.01
Smarcc1-201ENSMUST00000088716 Defb39Q70KL3 74 aa15.13■□□□□ 0.01
Smarcc1-201ENSMUST00000088716 Smr3aQ61900 147 aa15.11■□□□□ 0.01
Smarcc1-201ENSMUST00000088716 3110070M22RikQ9DAQ7 118 aa15.1■□□□□ 0.01
Smarcc1-201ENSMUST00000088716 Abca2P41234 2434 aa15.1■□□□□ 0.01
Smarcc1-201ENSMUST00000088716 Pkd1l2Q7TN88 2461 aa15.09■□□□□ 0.01
Smarcc1-201ENSMUST00000088716 A730009L09RikA0A1B0GS82 72 aa15.09■□□□□ 0.01
Smarcc1-201ENSMUST00000088716 Ighv1-56A0A0A6YXG2 117 aa15.08■□□□□ 0
Smarcc1-201ENSMUST00000088716 Col5a1O88207 1838 aa15.04■□□□□ -0
Smarcc1-201ENSMUST00000088716 Gm16181B0V2H2 73 aa15.04■□□□□ -0
Smarcc1-201ENSMUST00000088716 Gm10570F6VB42 170 aa15.04■□□□□ -0
Smarcc1-201ENSMUST00000088716 Tln1P26039 2541 aaKnown RBP15.03■□□□□ -0
Smarcc1-201ENSMUST00000088716 Reg3aO09037 175 aa15.02□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 Chchd10Q7TNL9 138 aa15.01□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 Ankhd1E9PUR0 2548 aaKnown RBP15□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 Ttc28Q80XJ3 2450 aa15□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 Cox6a2P43023 97 aa15□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 Notch2O35516 2470 aa14.99□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 CrygaP04345 174 aa14.98□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 SnurfQ9WU12 71 aa14.98□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 Defb37Q7TMD2 62 aa14.97□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 Mrpl34Q99N91 92 aa14.97□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 Defb11Q8R2I7 77 aa14.96□□□□□ -0.01
Smarcc1-201ENSMUST00000088716 Fam19a3Q7TPG6 132 aa14.96□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 Gm11627A6PWP4 55 aa14.95□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 4930519P11RikQ9CUJ8 166 aa14.95□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 Gm10642Q3TWM1 71 aa14.95□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 E130208F15RikQ3UPV3 143 aa14.95□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 Msrb1Q9JLC3 116 aa14.94□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 MobpQ9D2P8 170 aa14.94□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 1700018G05RikA0A1B0GSI2 66 aa14.93□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 Defb45Q3V490 66 aa14.92□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 Cdip1Q9DB75 208 aa14.91□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 Coa6Q8BGD8 79 aa14.9□□□□□ -0.02
Smarcc1-201ENSMUST00000088716 Ighv2-5A0A0A6YY69 116 aa14.89□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Krtap24-1G3X9A2 248 aa14.89□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Sptbn4E9PX29 2561 aa14.89□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Csdc2Q91YQ3 154 aa14.89□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Bean1Q9EQG5 255 aa14.89□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 P01819 144 aa14.88□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Dmac1Q9CQ00 111 aa14.88□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Chd8Q09XV5 2582 aaKnown RBP14.87□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 2310034G01RikA0A286YDL3 209 aa14.87□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Piezo2Q8CD54 2822 aa14.87□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Nav3Q80TN7 2359 aa14.87□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Gm17606F6ZL36 78 aa14.86□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Gm26661M0QWV4 156 aa14.84□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 4930518I15RikQ3V2W7 57 aa14.84□□□□□ -0.03
Smarcc1-201ENSMUST00000088716 Elof1P60003 83 aa14.83□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 Snhg11Q4G0K9 87 aa14.83□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 Sostdc1Q9CQN4 206 aa14.82□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 Gm21886J3QJU9 214 aa14.81□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 Gm10160F6Y577 67 aa14.81□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 AI606181Q8C7B9 129 aa14.81□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 Ighv2-2A0A075B5P8 116 aa14.79□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 P01821 116 aa14.79□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 6430550D23RikE9Q1X6 194 aa14.78□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 Gm9903Q8C9Y8 129 aa14.78□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 Znf414Q9DCK4 299 aa14.78□□□□□ -0.04
Smarcc1-201ENSMUST00000088716 Igkv8-27A0A0G2JF28 120 aa14.76□□□□□ -0.05
Smarcc1-201ENSMUST00000088716 Krtap26-1Q9D7N2 215 aa14.75□□□□□ -0.05
Smarcc1-201ENSMUST00000088716 Spata3Q9D9T6 193 aa14.75□□□□□ -0.05
Smarcc1-201ENSMUST00000088716 Gm10197F6QEY5 67 aa14.75□□□□□ -0.05
Smarcc1-201ENSMUST00000088716 Phf5aP83870 110 aaKnown RBP14.75□□□□□ -0.05
Smarcc1-201ENSMUST00000088716 Gm44790A0A0N4SV91 103 aa14.73□□□□□ -0.05
Smarcc1-201ENSMUST00000088716 Psors1c2Q80ZC9 134 aa14.73□□□□□ -0.05
Smarcc1-201ENSMUST00000088716 Defb50Q6TU36 73 aa14.7□□□□□ -0.06
Smarcc1-201ENSMUST00000088716 Spint4Q9D263 159 aa14.69□□□□□ -0.06
Smarcc1-201ENSMUST00000088716 Gm10999F6Q4M4 69 aa14.69□□□□□ -0.06
Smarcc1-201ENSMUST00000088716 Gm3250E9Q1M3 230 aa14.68□□□□□ -0.06
Smarcc1-201ENSMUST00000088716 Gm10772F7AIG4 85 aa14.67□□□□□ -0.06
Smarcc1-201ENSMUST00000088716 Gpr15lA0A0B4J1N3 78 aa14.67□□□□□ -0.06
Smarcc1-201ENSMUST00000088716 Prol1E9PYQ4 312 aa14.66□□□□□ -0.06
Smarcc1-201ENSMUST00000088716 Gm10837Q3UTT8 145 aa14.64□□□□□ -0.07
Smarcc1-201ENSMUST00000088716 Ptpn13Q64512 2453 aa14.64□□□□□ -0.07
Smarcc1-201ENSMUST00000088716 Gm10770F7D043 238 aa14.63□□□□□ -0.07
Smarcc1-201ENSMUST00000088716 A930002H24RikQ8C8Y3 163 aa14.63□□□□□ -0.07
Smarcc1-201ENSMUST00000088716 Usp9xP70398 2559 aaKnown RBP14.63□□□□□ -0.07
Smarcc1-201ENSMUST00000088716 AI854703Q8BIN3 203 aa14.61□□□□□ -0.07
Smarcc1-201ENSMUST00000088716 Gm12216A0A1W2P827 62 aa14.6□□□□□ -0.07
Smarcc1-201ENSMUST00000088716 Spaca4Q80ZQ0 127 aa14.59□□□□□ -0.07
Smarcc1-201ENSMUST00000088716 Gm27235Q3UW50 83 aa14.58□□□□□ -0.07
Smarcc1-201ENSMUST00000088716 Hivep3A2A884 2348 aa14.57□□□□□ -0.08
Smarcc1-201ENSMUST00000088716 Krtap16-1A2A5X5 502 aa14.55□□□□□ -0.08
Smarcc1-201ENSMUST00000088716 SetxA2AKX3 2646 aa14.55□□□□□ -0.08
Smarcc1-201ENSMUST00000088716 RetnlbQ99P86 105 aa14.54□□□□□ -0.08
Smarcc1-201ENSMUST00000088716 Rpl37aP61514 92 aa14.53□□□□□ -0.08
Smarcc1-201ENSMUST00000088716 Limd2Q8BGB5 128 aa14.53□□□□□ -0.08
Smarcc1-201ENSMUST00000088716 4930507D05RikQ8C9C9 103 aa14.53□□□□□ -0.08
Smarcc1-201ENSMUST00000088716 Gm5617Q91VN2 117 aa14.52□□□□□ -0.09
Smarcc1-201ENSMUST00000088716 Q8BT88 171 aa14.51□□□□□ -0.09
Smarcc1-201ENSMUST00000088716 Gm10308Q9CVR5 141 aa14.49□□□□□ -0.09
Smarcc1-201ENSMUST00000088716 TrrapQ80YV3 2565 aaKnown RBP14.49□□□□□ -0.09
Smarcc1-201ENSMUST00000088716 Fam168bQ80XQ8 194 aa14.49□□□□□ -0.09
Smarcc1-201ENSMUST00000088716 A530084C06RikQ3UTW2 186 aa14.47□□□□□ -0.09
Smarcc1-201ENSMUST00000088716 AplnQ9R0R4 77 aa14.47□□□□□ -0.09
Smarcc1-201ENSMUST00000088716 Krtap11-1E9Q2E9 183 aa14.46□□□□□ -0.09
Smarcc1-201ENSMUST00000088716 SrcapA0A087WQ44 3271 aa14.46□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 157.2 ms