RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Rhox8Q6VSS7 320 aa38.43■■■■□ 3.74
Smarcc1-201ENSMUST00000088716 Rpgrip1Q9EPQ2 1331 aa34.79■■■■□ 3.16
Smarcc1-201ENSMUST00000088716 Ehmt2Q9Z148 1263 aaKnown RBP34.37■■■■□ 3.09
Smarcc1-201ENSMUST00000088716 Ccdc136Q3TVA9 1136 aa34.01■■■■□ 3.03
Smarcc1-201ENSMUST00000088716 Esf1Q3V1V3 845 aaKnown RBP33.97■■■■□ 3.03
Smarcc1-201ENSMUST00000088716 Cngb1E1AZ71 1325 aa33.91■■■■□ 3.02
Smarcc1-201ENSMUST00000088716 Las1lA2BE28 776 aaKnown RBP33.62■■■□□ 2.97
Smarcc1-201ENSMUST00000088716 Wdr66E9Q743 1299 aa33.6■■■□□ 2.97
Smarcc1-201ENSMUST00000088716 Ube2uB1AUC4 352 aa33.5■■■□□ 2.95
Smarcc1-201ENSMUST00000088716 Gab3Q8BSM5 595 aa33.4■■■□□ 2.94
Smarcc1-201ENSMUST00000088716 Zeb1Q64318 1117 aa33.39■■■□□ 2.94
Smarcc1-201ENSMUST00000088716 Trim41Q5NCC3 630 aa33.33■■■□□ 2.93
Smarcc1-201ENSMUST00000088716 Npm2Q80W85 207 aa33.26■■■□□ 2.92
Smarcc1-201ENSMUST00000088716 NischQ80TM9 1593 aa33.07■■■□□ 2.88
Smarcc1-201ENSMUST00000088716 Pelp1Q9DBD5 1123 aaKnown RBP32.96■■■□□ 2.87
Smarcc1-201ENSMUST00000088716 Myt1lP97500 1187 aa32.94■■■□□ 2.86
Smarcc1-201ENSMUST00000088716 UbtfP25976 765 aaKnown RBP32.2■■■□□ 2.74
Smarcc1-201ENSMUST00000088716 NefmP08553 848 aa32.13■■■□□ 2.73
Smarcc1-201ENSMUST00000088716 Acin1Q9JIX8 1338 aaKnown RBP32.13■■■□□ 2.73
Smarcc1-201ENSMUST00000088716 Stra8P70278 393 aa31.91■■■□□ 2.7
Smarcc1-201ENSMUST00000088716 CenpbP27790 599 aa31.87■■■□□ 2.69
Smarcc1-201ENSMUST00000088716 Il27Q8K3I6 234 aa31.79■■■□□ 2.68
Smarcc1-201ENSMUST00000088716 Slc24a1Q91WD8 1130 aa31.77■■■□□ 2.68
Smarcc1-201ENSMUST00000088716 Ccdc180J3QNE4 1664 aa31.68■■■□□ 2.66
Smarcc1-201ENSMUST00000088716 HrcG5E8J6 738 aa31.59■■■□□ 2.65
Smarcc1-201ENSMUST00000088716 Amer1Q7TS75 1132 aa31.55■■■□□ 2.64
Smarcc1-201ENSMUST00000088716 Ap3b1Q9Z1T1 1105 aa31.3■■■□□ 2.6
Smarcc1-201ENSMUST00000088716 Zcchc6Q5BLK4 1491 aaKnown RBP31.29■■■□□ 2.6
Smarcc1-201ENSMUST00000088716 Fam50aQ9WV03 339 aaKnown RBP31.28■■■□□ 2.6
Smarcc1-201ENSMUST00000088716 Rtl1Q7M732 1744 aa31.26■■■□□ 2.59
Smarcc1-201ENSMUST00000088716 Cdk11bP24788 784 aaKnown RBP31.24■■■□□ 2.59
Smarcc1-201ENSMUST00000088716 Anp32bQ9EST5 272 aaKnown RBP31.16■■■□□ 2.58
Smarcc1-201ENSMUST00000088716 Neurod1Q60867 357 aa31.14■■■□□ 2.58
Smarcc1-201ENSMUST00000088716 NrdcQ8BHG1 1161 aa31.13■■■□□ 2.57
Smarcc1-201ENSMUST00000088716 Abcc9P70170 1546 aa31.1■■■□□ 2.57
Smarcc1-201ENSMUST00000088716 NclP09405 707 aaKnown RBP31.08■■■□□ 2.57
Smarcc1-201ENSMUST00000088716 Os9Q8K2C7 672 aa31■■■□□ 2.55
Smarcc1-201ENSMUST00000088716 Tnnt3Q9QZ47 272 aa30.89■■■□□ 2.53
Smarcc1-201ENSMUST00000088716 Pcgf6Q99NA9 353 aa30.86■■■□□ 2.53
Smarcc1-201ENSMUST00000088716 NeflP08551 543 aa30.85■■■□□ 2.53
Smarcc1-201ENSMUST00000088716 Nop58Q6DFW4 536 aaKnown RBP30.85■■■□□ 2.53
Smarcc1-201ENSMUST00000088716 Gm35339A0A140LHH9 1649 aa30.85■■■□□ 2.53
Smarcc1-201ENSMUST00000088716 Eif5bQ05D44 1216 aaKnown RBP30.77■■■□□ 2.52
Smarcc1-201ENSMUST00000088716 TonslQ6NZL6 1363 aa30.72■■■□□ 2.51
Smarcc1-201ENSMUST00000088716 Ppargc1bQ8VHJ7 1014 aa30.7■■■□□ 2.51
Smarcc1-201ENSMUST00000088716 Ttbk1Q6PCN3 1308 aa30.66■■■□□ 2.5
Smarcc1-201ENSMUST00000088716 4933416C03RikQ3V063 378 aa30.61■■■□□ 2.49
Smarcc1-201ENSMUST00000088716 4930567H17RikQ3V0K5 233 aa30.46■■■□□ 2.47
Smarcc1-201ENSMUST00000088716 Npm1Q61937 292 aaKnown RBP30.46■■■□□ 2.47
Smarcc1-201ENSMUST00000088716 Mier1Q5UAK0 511 aa30.42■■■□□ 2.46
Smarcc1-201ENSMUST00000088716 Supt5hO55201 1082 aaKnown RBP30.4■■■□□ 2.46
Smarcc1-201ENSMUST00000088716 Lmod2Q3UHZ5 550 aa30.35■■■□□ 2.45
Smarcc1-201ENSMUST00000088716 Zbtb7cQ8VCZ7 619 aa30.35■■■□□ 2.45
Smarcc1-201ENSMUST00000088716 Myt1Q8CFC2 1127 aa30.3■■■□□ 2.44
Smarcc1-201ENSMUST00000088716 Hnrnpul2Q00PI9 745 aaKnown RBP30.21■■■□□ 2.43
Smarcc1-201ENSMUST00000088716 Plekhg3Q4VAC9 1341 aa30.21■■■□□ 2.43
Smarcc1-201ENSMUST00000088716 Gm13697A2AK42 830 aa30.12■■■□□ 2.41
Smarcc1-201ENSMUST00000088716 Ifnlr1Q8CGK5 535 aa30.02■■■□□ 2.4
Smarcc1-201ENSMUST00000088716 ClspnQ80YR7 1315 aa29.96■■■□□ 2.39
Smarcc1-201ENSMUST00000088716 Rtl5Q5DTT4 599 aa29.95■■■□□ 2.39
Smarcc1-201ENSMUST00000088716 Erich6D3Z6S9 713 aa29.91■■■□□ 2.38
Smarcc1-201ENSMUST00000088716 Chic1Q8CBW7 227 aa29.89■■■□□ 2.38
Smarcc1-201ENSMUST00000088716 Zbtb4Q5F293 982 aa29.88■■■□□ 2.37
Smarcc1-201ENSMUST00000088716 Abcc8B2RUS7 1588 aa29.86■■■□□ 2.37
Smarcc1-201ENSMUST00000088716 Atp1b4Q99ME6 356 aa29.84■■■□□ 2.37
Smarcc1-201ENSMUST00000088716 Nlrp6Q91WS2 869 aa29.82■■■□□ 2.36
Smarcc1-201ENSMUST00000088716 Brd4Q9ESU6 1400 aaKnown RBP29.74■■■□□ 2.35
Smarcc1-201ENSMUST00000088716 Hdac5Q9Z2V6 1113 aa29.7■■■□□ 2.34
Smarcc1-201ENSMUST00000088716 Clip1Q922J3 1391 aa29.67■■■□□ 2.34
Smarcc1-201ENSMUST00000088716 Fkbp15Q6P9Q6 1216 aaKnown RBP29.66■■■□□ 2.34
Smarcc1-201ENSMUST00000088716 Anp32aO35381 247 aa29.65■■■□□ 2.34
Smarcc1-201ENSMUST00000088716 Prdm10Q3UTQ7 1184 aa29.64■■■□□ 2.34
Smarcc1-201ENSMUST00000088716 Eid3Q3V124 375 aa29.63■■■□□ 2.33
Smarcc1-201ENSMUST00000088716 Mapk8ip2Q9ERE9 830 aa29.62■■■□□ 2.33
Smarcc1-201ENSMUST00000088716 Gm13695A2AK44 830 aa29.6■■■□□ 2.33
Smarcc1-201ENSMUST00000088716 Polr3glQ8R0C0 218 aa29.57■■■□□ 2.32
Smarcc1-201ENSMUST00000088716 DaxxO35613 739 aa29.44■■■□□ 2.3
Smarcc1-201ENSMUST00000088716 Cep164Q5DU05 1446 aa29.44■■■□□ 2.3
Smarcc1-201ENSMUST00000088716 Ccer2J3QPU5 274 aa29.44■■■□□ 2.3
Smarcc1-201ENSMUST00000088716 Ubl4bQ9CQ84 188 aa29.36■■■□□ 2.29
Smarcc1-201ENSMUST00000088716 Plppr3Q7TPB0 716 aa29.24■■■□□ 2.27
Smarcc1-201ENSMUST00000088716 Sall2Q9QX96 1004 aa29.24■■■□□ 2.27
Smarcc1-201ENSMUST00000088716 Dcaf1Q80TR8 1506 aa29.23■■■□□ 2.27
Smarcc1-201ENSMUST00000088716 Rb1cc1Q9ESK9 1588 aa29.2■■■□□ 2.27
Smarcc1-201ENSMUST00000088716 ArxO35085 564 aa29.2■■■□□ 2.27
Smarcc1-201ENSMUST00000088716 Chic2Q9D9G3 165 aa29.19■■■□□ 2.26
Smarcc1-201ENSMUST00000088716 Csrnp3P59055 597 aa29.18■■■□□ 2.26
Smarcc1-201ENSMUST00000088716 DiexfQ8BTT6 772 aaKnown RBP29.11■■■□□ 2.25
Smarcc1-201ENSMUST00000088716 Gm38655A0A286YDK6 273 aa29.08■■■□□ 2.25
Smarcc1-201ENSMUST00000088716 BlmO88700 1416 aa29.06■■■□□ 2.24
Smarcc1-201ENSMUST00000088716 Upf2A2AT37 1269 aaKnown RBP29.05■■■□□ 2.24
Smarcc1-201ENSMUST00000088716 Clstn2Q9ER65 966 aa29.04■■■□□ 2.24
Smarcc1-201ENSMUST00000088716 Anks4bQ8K3X6 423 aa29.03■■■□□ 2.24
Smarcc1-201ENSMUST00000088716 Rangap1P46061 589 aaKnown RBP29.01■■■□□ 2.23
Smarcc1-201ENSMUST00000088716 Rad21Q61550 635 aaKnown RBP28.99■■■□□ 2.23
Smarcc1-201ENSMUST00000088716 Calr4Q3TQS0 420 aa28.98■■■□□ 2.23
Smarcc1-201ENSMUST00000088716 Ppp4r2Q0VGB7 417 aa28.91■■■□□ 2.22
Smarcc1-201ENSMUST00000088716 Mrs2Q5NCE8 434 aa28.89■■■□□ 2.22
Smarcc1-201ENSMUST00000088716 Safb2Q80YR5 991 aaKnown RBP28.85■■■□□ 2.21
Smarcc1-201ENSMUST00000088716 Setd5Q5XJV7 1441 aa28.83■■■□□ 2.21
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms