RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 B9d2Q3UK10 175 aa14.11□□□□□ -0.15
Trim47-201ENSMUST00000021120 4930519P11RikQ9CUJ8 166 aa14.11□□□□□ -0.15
Trim47-201ENSMUST00000021120 Ighv2-9-1A0A075B697 116 aa14.1□□□□□ -0.15
Trim47-201ENSMUST00000021120 Trav9d-4A0A0G2JG37 103 aa14.1□□□□□ -0.15
Trim47-201ENSMUST00000021120 Ntn5Q3UQ22 452 aa14.1□□□□□ -0.15
Trim47-201ENSMUST00000021120 Defa21Q8C1P2 93 aa14.09□□□□□ -0.15
Trim47-201ENSMUST00000021120 Gm7257D3YX25 99 aa14.08□□□□□ -0.16
Trim47-201ENSMUST00000021120 Gpha2Q925Q5 128 aa14.08□□□□□ -0.16
Trim47-201ENSMUST00000021120 Mrpl55Q9CZ83 127 aa14.08□□□□□ -0.16
Trim47-201ENSMUST00000021120 Dad1P61804 113 aa14.07□□□□□ -0.16
Trim47-201ENSMUST00000021120 Defb50Q6TU36 73 aa14.07□□□□□ -0.16
Trim47-201ENSMUST00000021120 Igkv1-117A0A140T8M0 119 aa14.07□□□□□ -0.16
Trim47-201ENSMUST00000021120 Spink1P09036 80 aa14.07□□□□□ -0.16
Trim47-201ENSMUST00000021120 Defa7P50705 93 aa14.07□□□□□ -0.16
Trim47-201ENSMUST00000021120 Ppp1r32Q148A4 427 aa14.07□□□□□ -0.16
Trim47-201ENSMUST00000021120 Tmem243B2RVB9 118 aa14.06□□□□□ -0.16
Trim47-201ENSMUST00000021120 Gm10647E9Q8X0 124 aa14.06□□□□□ -0.16
Trim47-201ENSMUST00000021120 Higd2aQ9CQJ1 106 aa14.06□□□□□ -0.16
Trim47-201ENSMUST00000021120 1810062G17RikG3X8Y2 129 aa14.06□□□□□ -0.16
Trim47-201ENSMUST00000021120 Hbb-b2P02089 147 aa14.06□□□□□ -0.16
Trim47-201ENSMUST00000021120 Ndufa12Q7TMF3 145 aaKnown RBP14.05□□□□□ -0.16
Trim47-201ENSMUST00000021120 Zfand2aQ9JII7 171 aa14.05□□□□□ -0.16
Trim47-201ENSMUST00000021120 Igkv4-54A0A0G2JES9 117 aa14.05□□□□□ -0.16
Trim47-201ENSMUST00000021120 GhrhP16043 103 aa14.05□□□□□ -0.16
Trim47-201ENSMUST00000021120 Gm4707V9GXN5 68 aa14.05□□□□□ -0.16
Trim47-201ENSMUST00000021120 Kmt2aP55200 3966 aa14.04□□□□□ -0.16
Trim47-201ENSMUST00000021120 Sh2d1aO88890 126 aa14.04□□□□□ -0.16
Trim47-201ENSMUST00000021120 Trav13-4-dv7A0A075B6C2 110 aa14.03□□□□□ -0.16
Trim47-201ENSMUST00000021120 Gm10772F7AIG4 85 aa14.03□□□□□ -0.16
Trim47-201ENSMUST00000021120 MobpQ9D2P8 170 aa14.03□□□□□ -0.16
Trim47-201ENSMUST00000021120 Dnah10D3YYQ8 4591 aa14.03□□□□□ -0.16
Trim47-201ENSMUST00000021120 Gm16381A0A1Y7VKT9 73 aa14.03□□□□□ -0.16
Trim47-201ENSMUST00000021120 Ighv1-56A0A0A6YXG2 117 aa14.02□□□□□ -0.16
Trim47-201ENSMUST00000021120 Ighv1-59A0A0A6YXE0 117 aa14.02□□□□□ -0.17
Trim47-201ENSMUST00000021120 Trav9d-3A0A075B695 113 aa14.01□□□□□ -0.17
Trim47-201ENSMUST00000021120 Klk9Q32M27 251 aa14.01□□□□□ -0.17
Trim47-201ENSMUST00000021120 H2al1bA0A087WP11 105 aa14□□□□□ -0.17
Trim47-201ENSMUST00000021120 H2al1kJ3QP08 105 aa14□□□□□ -0.17
Trim47-201ENSMUST00000021120 H2al1eQ810S6 105 aa14□□□□□ -0.17
Trim47-201ENSMUST00000021120 H2al1mQ9DAD9 105 aa14□□□□□ -0.17
Trim47-201ENSMUST00000021120 Ighv13-2A0A0A6YWN3 119 aa14□□□□□ -0.17
Trim47-201ENSMUST00000021120 Igkv4-72A0A0B4J1I4 117 aa14□□□□□ -0.17
Trim47-201ENSMUST00000021120 Igkv1-35A0A0G2JDE5 120 aa14□□□□□ -0.17
Trim47-201ENSMUST00000021120 Dnal4Q9DCM4 105 aa14□□□□□ -0.17
Trim47-201ENSMUST00000021120 Pfn2Q9JJV2 140 aa13.99□□□□□ -0.17
Trim47-201ENSMUST00000021120 Defb29Q8BGW9 78 aa13.98□□□□□ -0.17
Trim47-201ENSMUST00000021120 Cystm1Q8K353 104 aa13.98□□□□□ -0.17
Trim47-201ENSMUST00000021120 P01755 137 aa13.96□□□□□ -0.17
Trim47-201ENSMUST00000021120 Vpreb1P13372 142 aa13.96□□□□□ -0.17
Trim47-201ENSMUST00000021120 Prp2P05143 317 aa13.95□□□□□ -0.18
Trim47-201ENSMUST00000021120 Cox7a1P56392 80 aa13.95□□□□□ -0.18
Trim47-201ENSMUST00000021120 Igkv4-61A0A0G2JH00 117 aa13.94□□□□□ -0.18
Trim47-201ENSMUST00000021120 Brk1Q91VR8 75 aa13.94□□□□□ -0.18
Trim47-201ENSMUST00000021120 Igkv1-99F6XWB2 120 aa13.94□□□□□ -0.18
Trim47-201ENSMUST00000021120 Sslp1Q3UN54 99 aa13.94□□□□□ -0.18
Trim47-201ENSMUST00000021120 Defa23Q5G866 93 aa13.94□□□□□ -0.18
Trim47-201ENSMUST00000021120 Defb11Q8R2I7 77 aa13.94□□□□□ -0.18
Trim47-201ENSMUST00000021120 Gm37389A0A0A6YW05 95 aa13.93□□□□□ -0.18
Trim47-201ENSMUST00000021120 Ighv1-49A0A0A6YWX2 117 aa13.93□□□□□ -0.18
Trim47-201ENSMUST00000021120 Naa38Q9D2U5 125 aa13.93□□□□□ -0.18
Trim47-201ENSMUST00000021120 Gm43218A0A0G2JGT0 114 aa13.92□□□□□ -0.18
Trim47-201ENSMUST00000021120 Spink4O35679 86 aa13.92□□□□□ -0.18
Trim47-201ENSMUST00000021120 Ifitm6A0A1B0GS75 124 aa13.92□□□□□ -0.18
Trim47-201ENSMUST00000021120 Ube2d4D3YUH6 135 aa13.92□□□□□ -0.18
Trim47-201ENSMUST00000021120 Smim26Q3V460 107 aa13.91□□□□□ -0.18
Trim47-201ENSMUST00000021120 Tmem223Q9CQE2 199 aaKnown RBP13.91□□□□□ -0.18
Trim47-201ENSMUST00000021120 Tmem254aP0DN89 123 aa13.91□□□□□ -0.18
Trim47-201ENSMUST00000021120 Tmem254bP0DN90 123 aa13.91□□□□□ -0.18
Trim47-201ENSMUST00000021120 Tmem254cP0DN91 123 aa13.91□□□□□ -0.18
Trim47-201ENSMUST00000021120 B230359F08RikA0A0B4J1K3 109 aa13.9□□□□□ -0.18
Trim47-201ENSMUST00000021120 Trav13d-4A0A0G2JFX3 110 aa13.9□□□□□ -0.18
Trim47-201ENSMUST00000021120 Igkv6-13A0A0G2JGY3 119 aa13.9□□□□□ -0.18
Trim47-201ENSMUST00000021120 Gm7102J3QQ10 178 aa13.9□□□□□ -0.18
Trim47-201ENSMUST00000021120 Serp1Q9Z1W5 66 aa13.9□□□□□ -0.18
Trim47-201ENSMUST00000021120 Gm17349F7BGH6 99 aa13.88□□□□□ -0.19
Trim47-201ENSMUST00000021120 PrcdQ00LT2 53 aa13.88□□□□□ -0.19
Trim47-201ENSMUST00000021120 Dnah14A0A140LIJ4 4489 aa13.88□□□□□ -0.19
Trim47-201ENSMUST00000021120 Gm5142Q8C5X9 133 aa13.87□□□□□ -0.19
Trim47-201ENSMUST00000021120 Megf8P60882 2789 aa13.86□□□□□ -0.19
Trim47-201ENSMUST00000021120 Sprr1bQ62267 153 aa13.86□□□□□ -0.19
Trim47-201ENSMUST00000021120 Tcl1b3P56842 122 aa13.84□□□□□ -0.19
Trim47-201ENSMUST00000021120 Pou2af1Q64693 256 aa13.84□□□□□ -0.19
Trim47-201ENSMUST00000021120 Lamtor3O88653 124 aa13.83□□□□□ -0.2
Trim47-201ENSMUST00000021120 Gm10845Q3UNY9 185 aa13.83□□□□□ -0.2
Trim47-201ENSMUST00000021120 Dph3Q8K0W9 82 aa13.83□□□□□ -0.2
Trim47-201ENSMUST00000021120 Trav13n-2A0A0G2JF93 110 aa13.82□□□□□ -0.2
Trim47-201ENSMUST00000021120 Gm16181B0V2H2 73 aa13.82□□□□□ -0.2
Trim47-201ENSMUST00000021120 Dnah3Q8BW94 4083 aa13.81□□□□□ -0.2
Trim47-201ENSMUST00000021120 Trav13-1A0A075B644 110 aa13.8□□□□□ -0.2
Trim47-201ENSMUST00000021120 Odf3l2Q3TZ65 277 aa13.8□□□□□ -0.2
Trim47-201ENSMUST00000021120 Pkd1l1Q8R526 2615 aa13.8□□□□□ -0.2
Trim47-201ENSMUST00000021120 Rpl39lQ9CQD0 51 aa13.79□□□□□ -0.2
Trim47-201ENSMUST00000021120 Psors1c2Q80ZC9 134 aa13.79□□□□□ -0.2
Trim47-201ENSMUST00000021120 Tomm7Q9D173 55 aa13.79□□□□□ -0.2
Trim47-201ENSMUST00000021120 Q9DAA7 145 aa13.79□□□□□ -0.2
Trim47-201ENSMUST00000021120 Igkv4-53A0A0G2JFC6 119 aa13.78□□□□□ -0.2
Trim47-201ENSMUST00000021120 Gm5153P01627 120 aa13.78□□□□□ -0.2
Trim47-201ENSMUST00000021120 Ighv8-13A0A075B5Y0 101 aa13.77□□□□□ -0.21
Trim47-201ENSMUST00000021120 Igkv8-18A0A0B4J1J3 123 aa13.77□□□□□ -0.21
Trim47-201ENSMUST00000021120 Trbv13-2A0A140T8N6 113 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms