RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Gm35339A0A140LHH9 1649 aa42,35■■■■■ 4,37
Trim47-201ENSMUST00000021120 NischQ80TM9 1593 aa42,26■■■■■ 4,36
Trim47-201ENSMUST00000021120 Abcc9P70170 1546 aa40,99■■■■■ 4,15
Trim47-201ENSMUST00000021120 Abcc8B2RUS7 1588 aa40,52■■■■■ 4,08
Trim47-201ENSMUST00000021120 ScribQ80U72 1612 aa38,52■■■■□ 3,76
Trim47-201ENSMUST00000021120 Dcaf1Q80TR8 1506 aa37,58■■■■□ 3,61
Trim47-201ENSMUST00000021120 Rhox8Q6VSS7 320 aa37,55■■■■□ 3,6
Trim47-201ENSMUST00000021120 Kdm5dQ62240 1548 aa37,49■■■■□ 3,59
Trim47-201ENSMUST00000021120 NacadQ5SWP3 1504 aa37,41■■■■□ 3,58
Trim47-201ENSMUST00000021120 Rb1cc1Q9ESK9 1588 aa36,95■■■■□ 3,51
Trim47-201ENSMUST00000021120 Sycp2Q9CUU3 1500 aa36,62■■■■□ 3,45
Trim47-201ENSMUST00000021120 Ccdc180J3QNE4 1664 aa36,58■■■■□ 3,45
Trim47-201ENSMUST00000021120 Baz1aO88379 1555 aa36,47■■■■□ 3,43
Trim47-201ENSMUST00000021120 Crybg2B7ZCC2 1516 aa36,1■■■■□ 3,37
Trim47-201ENSMUST00000021120 BicraF8VPZ9 1578 aa35,97■■■■□ 3,35
Trim47-201ENSMUST00000021120 Rtl1Q7M732 1744 aa35,93■■■■□ 3,34
Trim47-201ENSMUST00000021120 Zcchc6Q5BLK4 1491 aaKnown RBP35,8■■■■□ 3,32
Trim47-201ENSMUST00000021120 Smarca2Q6DIC0 1577 aa35,51■■■■□ 3,28
Trim47-201ENSMUST00000021120 Ccdc136Q3TVA9 1136 aa34,96■■■■□ 3,19
Trim47-201ENSMUST00000021120 Cecr2E9Q2Z1 1453 aa34,95■■■■□ 3,19
Trim47-201ENSMUST00000021120 Smarca4Q3TKT4 1613 aaKnown RBP34,77■■■■□ 3,16
Trim47-201ENSMUST00000021120 Pds5bQ4VA53 1446 aaKnown RBP34,74■■■■□ 3,15
Trim47-201ENSMUST00000021120 Atad2bE9Q166 1460 aaKnown RBP34,61■■■■□ 3,13
Trim47-201ENSMUST00000021120 Brd4Q9ESU6 1400 aaKnown RBP34,58■■■■□ 3,13
Trim47-201ENSMUST00000021120 Iqgap2Q3UQ44 1575 aa34,45■■■■□ 3,11
Trim47-201ENSMUST00000021120 Trim41Q5NCC3 630 aa34,44■■■■□ 3,1
Trim47-201ENSMUST00000021120 Synj1Q8CHC4 1574 aa34,42■■■■□ 3,1
Trim47-201ENSMUST00000021120 CftrP26361 1476 aa34,36■■■■□ 3,09
Trim47-201ENSMUST00000021120 Cttnbp2B9EJA2 1648 aa34,34■■■■□ 3,09
Trim47-201ENSMUST00000021120 Ercc6F8VPZ5 1481 aa34,09■■■■□ 3,05
Trim47-201ENSMUST00000021120 Thoc2B1AZI6 1594 aaKnown RBP34,08■■■■□ 3,05
Trim47-201ENSMUST00000021120 Wdr62Q3U3T8 1523 aa33,98■■■■□ 3,03
Trim47-201ENSMUST00000021120 Rpgrip1Q9EPQ2 1331 aa33,95■■■■□ 3,03
Trim47-201ENSMUST00000021120 Frmpd1A2AKB4 1549 aa33,91■■■■□ 3,02
Trim47-201ENSMUST00000021120 Esf1Q3V1V3 845 aaKnown RBP33,87■■■■□ 3,01
Trim47-201ENSMUST00000021120 Golga3P55937 1487 aa33,71■■■□□ 2,99
Trim47-201ENSMUST00000021120 Cc2d2aQ8CFW7 1633 aa33,62■■■□□ 2,97
Trim47-201ENSMUST00000021120 Cngb1E1AZ71 1325 aa33,61■■■□□ 2,97
Trim47-201ENSMUST00000021120 Top2bQ64511 1612 aa33,56■■■□□ 2,96
Trim47-201ENSMUST00000021120 Unc13aQ4KUS2 1712 aa33,56■■■□□ 2,96
Trim47-201ENSMUST00000021120 Fam135aQ6NS59 1506 aa33,51■■■□□ 2,96
Trim47-201ENSMUST00000021120 Phldb1Q6PDH0 1371 aaKnown RBP33,48■■■□□ 2,95
Trim47-201ENSMUST00000021120 Dnajc5bQ9CQ94 199 aa33,46■■■□□ 2,95
Trim47-201ENSMUST00000021120 HrcG5E8J6 738 aa33,33■■■□□ 2,93
Trim47-201ENSMUST00000021120 Rsf1E9PWW9 1441 aaKnown RBP33,2■■■□□ 2,91
Trim47-201ENSMUST00000021120 Fmn1Q05860 1466 aa33,13■■■□□ 2,89
Trim47-201ENSMUST00000021120 Ubl4bQ9CQ84 188 aa33,13■■■□□ 2,89
Trim47-201ENSMUST00000021120 Lamc3Q9R0B6 1581 aa33,12■■■□□ 2,89
Trim47-201ENSMUST00000021120 Baz1bQ9Z277 1479 aa33,09■■■□□ 2,89
Trim47-201ENSMUST00000021120 Ccdc88bQ4QRL3 1481 aa33,08■■■□□ 2,89
Trim47-201ENSMUST00000021120 Kif15Q6P9L6 1387 aa33,07■■■□□ 2,88
Trim47-201ENSMUST00000021120 TnnQ80Z71 1560 aa33,07■■■□□ 2,88
Trim47-201ENSMUST00000021120 Acin1Q9JIX8 1338 aaKnown RBP33,06■■■□□ 2,88
Trim47-201ENSMUST00000021120 Chic1Q8CBW7 227 aa32,94■■■□□ 2,86
Trim47-201ENSMUST00000021120 Cep164Q5DU05 1446 aa32,92■■■□□ 2,86
Trim47-201ENSMUST00000021120 Cux2P70298 1426 aa32,8■■■□□ 2,84
Trim47-201ENSMUST00000021120 Mrc2Q64449 1479 aa32,75■■■□□ 2,83
Trim47-201ENSMUST00000021120 Top2aQ01320 1528 aaKnown RBP32,72■■■□□ 2,83
Trim47-201ENSMUST00000021120 Camsap1A2AHC3 1581 aa32,68■■■□□ 2,82
Trim47-201ENSMUST00000021120 Ccdc18Q640L5 1455 aa32,67■■■□□ 2,82
Trim47-201ENSMUST00000021120 Il27Q8K3I6 234 aa32,56■■■□□ 2,8
Trim47-201ENSMUST00000021120 Npm1Q61937 292 aaKnown RBP32,53■■■□□ 2,8
Trim47-201ENSMUST00000021120 Gab3Q8BSM5 595 aa32,38■■■□□ 2,77
Trim47-201ENSMUST00000021120 Kif21aQ9QXL2 1672 aa32,37■■■□□ 2,77
Trim47-201ENSMUST00000021120 Grin2bQ01097 1482 aa32,31■■■□□ 2,76
Trim47-201ENSMUST00000021120 LrpprcQ6PB66 1392 aaKnown RBP32,3■■■□□ 2,76
Trim47-201ENSMUST00000021120 NrkQ9R0G8 1455 aa32,2■■■□□ 2,74
Trim47-201ENSMUST00000021120 Dhx29Q6PGC1 1365 aaKnown RBP32,19■■■□□ 2,74
Trim47-201ENSMUST00000021120 PogzQ8BZH4 1409 aaKnown RBP32,19■■■□□ 2,74
Trim47-201ENSMUST00000021120 Ehmt2Q9Z148 1263 aaKnown RBP32,16■■■□□ 2,74
Trim47-201ENSMUST00000021120 Rapgef2Q8CHG7 1496 aa32,12■■■□□ 2,73
Trim47-201ENSMUST00000021120 Shroom4Q1W617 1475 aa32,11■■■□□ 2,73
Trim47-201ENSMUST00000021120 Crocc2F6XLV1 1638 aa32,09■■■□□ 2,73
Trim47-201ENSMUST00000021120 PtprkP35822 1457 aa32,09■■■□□ 2,73
Trim47-201ENSMUST00000021120 Duox2A2AQ99 1517 aa32,08■■■□□ 2,73
Trim47-201ENSMUST00000021120 Npm2Q80W85 207 aa32,03■■■□□ 2,72
Trim47-201ENSMUST00000021120 Efcab5A0JP43 1406 aa32,01■■■□□ 2,72
Trim47-201ENSMUST00000021120 Lrriq1Q0P5X1 1673 aa32■■■□□ 2,71
Trim47-201ENSMUST00000021120 Pcgf6Q99NA9 353 aa32■■■□□ 2,71
Trim47-201ENSMUST00000021120 Cep162Q6ZQ06 1403 aa31,89■■■□□ 2,69
Trim47-201ENSMUST00000021120 Samd9lQ69Z37 1561 aa31,88■■■□□ 2,69
Trim47-201ENSMUST00000021120 Plb1Q3TTY0 1478 aa31,87■■■□□ 2,69
Trim47-201ENSMUST00000021120 Urb2E9Q7L1 1524 aaKnown RBP31,86■■■□□ 2,69
Trim47-201ENSMUST00000021120 Eif4g1Q6NZJ6 1600 aaKnown RBP31,84■■■□□ 2,69
Trim47-201ENSMUST00000021120 Arhgap35Q91YM2 1499 aa31,76■■■□□ 2,67
Trim47-201ENSMUST00000021120 Zeb1Q64318 1117 aa31,75■■■□□ 2,67
Trim47-201ENSMUST00000021120 Mroh2bQ7M6Y6 1581 aa31,72■■■□□ 2,67
Trim47-201ENSMUST00000021120 Map3k1P53349 1493 aa31,7■■■□□ 2,67
Trim47-201ENSMUST00000021120 SynmQ70IV5 1561 aa31,66■■■□□ 2,66
Trim47-201ENSMUST00000021120 Ift140E9PY46 1464 aa31,65■■■□□ 2,66
Trim47-201ENSMUST00000021120 Myt1lP97500 1187 aa31,64■■■□□ 2,66
Trim47-201ENSMUST00000021120 Rad54l2Q99NG0 1466 aa31,62■■■□□ 2,65
Trim47-201ENSMUST00000021120 Disp1Q3TDN0 1521 aa31,57■■■□□ 2,64
Trim47-201ENSMUST00000021120 Eif4g3Q80XI3 1579 aaKnown RBP31,54■■■□□ 2,64
Trim47-201ENSMUST00000021120 Pbrm1Q8BSQ9 1634 aaKnown RBP31,53■■■□□ 2,64
Trim47-201ENSMUST00000021120 AqrQ8CFQ3 1481 aaKnown RBP31,52■■■□□ 2,64
Trim47-201ENSMUST00000021120 Magi3Q9EQJ9 1476 aa31,49■■■□□ 2,63
Trim47-201ENSMUST00000021120 Grin2aP35436 1464 aa31,48■■■□□ 2,63
Trim47-201ENSMUST00000021120 Setd1bQ8CFT2 1985 aa31,47■■■□□ 2,63
Trim47-201ENSMUST00000021120 Clip1Q922J3 1391 aa31,46■■■□□ 2,63
Retrieved 100 of 22,080 RNA–protein pairs in 11,4 ms