RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Fgf23Q9EPC2 251 aa9.03□□□□□ -0.96
Clcn3-201ENSMUST00000004430 4930518I15RikQ3V2W7 57 aa9.03□□□□□ -0.96
Clcn3-201ENSMUST00000004430 Gm10845Q3UNY9 185 aa9.03□□□□□ -0.96
Clcn3-201ENSMUST00000004430 Akap13E9Q394 2776 aa9.03□□□□□ -0.96
Clcn3-201ENSMUST00000004430 Vpreb1P13372 142 aa9.02□□□□□ -0.96
Clcn3-201ENSMUST00000004430 SbsponQ3UPR9 264 aa9.02□□□□□ -0.96
Clcn3-201ENSMUST00000004430 SvipQ3UZP4 77 aa9.02□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Esm1Q9QYY7 184 aa9.02□□□□□ -0.97
Clcn3-201ENSMUST00000004430 FlnaQ8BTM8 2647 aaKnown RBP9.02□□□□□ -0.97
Clcn3-201ENSMUST00000004430 CicQ924A2 2510 aa9.01□□□□□ -0.97
Clcn3-201ENSMUST00000004430 SnurfQ9WU12 71 aa9.01□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Spink4O35679 86 aa9.01□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Ube2bP63147 152 aa9.01□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Cox7b2Q9D2H1 82 aa9.01□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Mrpl52Q9D0Y8 121 aa9□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Klk9Q32M27 251 aa9□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Gm10549Q3URY4 149 aa9□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Cd164l2Q9D6W7 172 aa9□□□□□ -0.97
Clcn3-201ENSMUST00000004430 AtrQ9JKK8 2635 aa9□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Tmem258P61166 79 aa8.99□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Ubr5Q80TP3 2792 aa8.99□□□□□ -0.97
Clcn3-201ENSMUST00000004430 NipblQ6KCD5 2798 aaKnown RBP8.99□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Defb40Q70KL2 73 aa8.99□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Gm10735Q3US96 136 aa8.98□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Gpha2Q925Q5 128 aa8.98□□□□□ -0.97
Clcn3-201ENSMUST00000004430 Itpr3P70227 2670 aa8.98□□□□□ -0.97
Clcn3-201ENSMUST00000004430 HrnrQ8VHD8 2496 aa8.97□□□□□ -0.97
Clcn3-201ENSMUST00000004430 9530003J23RikQ8BM26 151 aa8.96□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Chchd7Q8K2Q5 85 aa8.96□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Zfand2aQ9JII7 171 aa8.96□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Svep1A2AVA0 3567 aa8.95□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Gm3250E9Q1M3 230 aa8.95□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Ighv1-59A0A0A6YXE0 117 aa8.95□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Ankrd17Q99NH0 2603 aaKnown RBP8.95□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Vpreb2P13373 142 aa8.95□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Ighv10-1A0A0B4J1J6 119 aa8.94□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Fn1P11276 2477 aaKnown RBP8.94□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Chd6A3KFM7 2711 aa8.94□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Usp24B1AY13 2617 aaKnown RBP8.94□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Cmya5Q70KF4 3739 aa8.93□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Fam19a5Q91WE9 132 aa8.93□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Csdc2Q91YQ3 154 aa8.93□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Defb37Q7TMD2 62 aa8.93□□□□□ -0.98
Clcn3-201ENSMUST00000004430 A830031A19RikQ8BNT5 113 aa8.93□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Dph3Q8K0W9 82 aa8.93□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Gm37389A0A0A6YW05 95 aa8.92□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Gm11011D3Z3L9 86 aa8.92□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Gm9195A0A140LHT4 2805 aa8.92□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Gm17521F6QAC8 156 aa8.92□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Gm26661M0QWV4 156 aa8.92□□□□□ -0.98
Clcn3-201ENSMUST00000004430 P06320 134 aa8.92□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Bri3P28662 125 aa8.91□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Gm9767G3X930 207 aa8.91□□□□□ -0.98
Clcn3-201ENSMUST00000004430 CrygaP04345 174 aa8.91□□□□□ -0.98
Clcn3-201ENSMUST00000004430 7530416G11RikJ3QJX6 159 aa8.9□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Gm5153P01627 120 aa8.9□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Pde6gP09174 87 aa8.9□□□□□ -0.98
Clcn3-201ENSMUST00000004430 Gm19935A0A1B0GSF9 52 aa8.89□□□□□ -0.99
Clcn3-201ENSMUST00000004430 FasnP19096 2504 aaKnown RBP8.88□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Tcl1b3P56842 122 aa8.88□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Fam19a3Q7TPG6 132 aa8.88□□□□□ -0.99
Clcn3-201ENSMUST00000004430 MobpQ9D2P8 170 aa8.87□□□□□ -0.99
Clcn3-201ENSMUST00000004430 D730001G18RikA0A087WQU7 115 aa8.87□□□□□ -0.99
Clcn3-201ENSMUST00000004430 9430015G10RikA2ASP7 199 aa8.87□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Ndufc1Q9CQY9 76 aa8.87□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Chd9Q8BYH8 2885 aa8.87□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Gm10401E9Q3K6 71 aa8.87□□□□□ -0.99
Clcn3-201ENSMUST00000004430 A830005F24RikQ8BRT5 167 aa8.87□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Ighv1-56A0A0A6YXG2 117 aa8.86□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Defb10Q8R2I8 73 aa8.86□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Wfdc13Q5DQQ6 81 aa8.86□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Krtap26-1Q9D7N2 215 aa8.86□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Muc2Q80Z19 2680 aa8.86□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Gm11565A2A4M7 156 aa8.85□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Odf3l2Q3TZ65 277 aa8.85□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Dmbt1Q60997 2085 aa8.85□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Utp20Q5XG71 2788 aaKnown RBP8.84□□□□□ -0.99
Clcn3-201ENSMUST00000004430 Cox7bP56393 80 aa8.84□□□□□ -0.99
Clcn3-201ENSMUST00000004430 4930556J24RikQ9D4U7 146 aa8.84□□□□□ -0.99
Clcn3-201ENSMUST00000004430 CrygfQ9CXV3 174 aa8.83□□□□□ -1
Clcn3-201ENSMUST00000004430 Ifitm6A0A1B0GS75 124 aa8.83□□□□□ -1
Clcn3-201ENSMUST00000004430 Q9DAA7 145 aa8.83□□□□□ -1
Clcn3-201ENSMUST00000004430 Ighv10-3A0A075B5T6 119 aa8.83□□□□□ -1
Clcn3-201ENSMUST00000004430 Kmt2bO08550 2713 aa8.83□□□□□ -1
Clcn3-201ENSMUST00000004430 Srsf12Q8C8K3 266 aa8.82□□□□□ -1
Clcn3-201ENSMUST00000004430 Igkv4-92A0A0B4J1I2 117 aa8.82□□□□□ -1
Clcn3-201ENSMUST00000004430 Igkv8-27A0A0G2JF28 120 aa8.81□□□□□ -1
Clcn3-201ENSMUST00000004430 Igkv8-30A0A140T8M3 121 aa8.81□□□□□ -1
Clcn3-201ENSMUST00000004430 Celsr2Q9R0M0 2920 aa8.8□□□□□ -1
Clcn3-201ENSMUST00000004430 Gm10772F7AIG4 85 aa8.8□□□□□ -1
Clcn3-201ENSMUST00000004430 Defb38Q7TNV7 63 aa8.8□□□□□ -1
Clcn3-201ENSMUST00000004430 Cd164Q9R0L9 197 aa8.8□□□□□ -1
Clcn3-201ENSMUST00000004430 Igkv1-110A0A0B4J1I0 119 aa8.79□□□□□ -1
Clcn3-201ENSMUST00000004430 Msrb1Q9JLC3 116 aa8.79□□□□□ -1
Clcn3-201ENSMUST00000004430 FlncQ8VHX6 2726 aaKnown RBP8.78□□□□□ -1
Clcn3-201ENSMUST00000004430 9230102O04RikA2ASX7 82 aa8.78□□□□□ -1
Clcn3-201ENSMUST00000004430 Gm17689B3GLJ4 109 aa8.78□□□□□ -1
Clcn3-201ENSMUST00000004430 Ighv2-9-1A0A075B697 116 aa8.77□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Vpreb3D3Z6J4 130 aa8.77□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Ntn5Q3UQ22 452 aa8.76□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 70 ms