RNA–Protein interactions for RNA: ENSMUST00000111046.8

Bdnf-206, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,819 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-206ENSMUST00000111046 FlncQ8VHX6 2726 aaKnown RBP6.27□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Gm26661M0QWV4 156 aa6.27□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Gatd1Q8BFQ8 220 aa6.27□□□□□ -1.41
Bdnf-206ENSMUST00000111046 AI854703Q8BIN3 203 aa6.27□□□□□ -1.41
Bdnf-206ENSMUST00000111046 CrygfQ9CXV3 174 aa6.27□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Gm7102J3QQ10 178 aa6.27□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Q9DAQ5 155 aa6.27□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Defa1P11477 93 aa6.26□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Tmem223Q9CQE2 199 aaKnown RBP6.26□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Crip2Q9DCT8 208 aaKnown RBP6.26□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Cdk2ap2Q9CPY4 127 aa6.26□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Reg3dQ9QUS9 175 aa6.26□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Ly6hQ9WUC3 139 aa6.26□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Tep1P97499 2629 aa6.26□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Ighv1-59A0A0A6YXE0 117 aa6.26□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Sslp1Q3UN54 99 aa6.26□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Trav13-1A0A075B644 110 aa6.25□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Gm3250E9Q1M3 230 aa6.25□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Smim26Q3V460 107 aa6.25□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Gm4861Q8C5A4 106 aa6.25□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Esm1Q9QYY7 184 aa6.25□□□□□ -1.41
Bdnf-206ENSMUST00000111046 FlnbQ80X90 2602 aaKnown RBP6.25□□□□□ -1.41
Bdnf-206ENSMUST00000111046 NipblQ6KCD5 2798 aaKnown RBP6.25□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Trav13-2A0A075B649 110 aa6.25□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Ighv13-2A0A0A6YWN3 119 aa6.25□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Gm12057A0A087WR21 115 aa6.24□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Plac8l1Q08EJ0 177 aa6.24□□□□□ -1.41
Bdnf-206ENSMUST00000111046 D130052B06RikQ3UW13 202 aa6.24□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Pdzd2E9Q1M1 2796 aa6.23□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Igkv4-53A0A0G2JFC6 119 aa6.23□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Xcl1P47993 114 aa6.23□□□□□ -1.41
Bdnf-206ENSMUST00000111046 4930432M17RikQ3V0W9 174 aa6.23□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Igkv4-72A0A0B4J1I4 117 aa6.23□□□□□ -1.41
Bdnf-206ENSMUST00000111046 A030005K14RikA0A1Y7VNY1 122 aa6.23□□□□□ -1.41
Bdnf-206ENSMUST00000111046 4930546C10RikE9Q4Y3 121 aa6.23□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Trav9n-4A0A075B631 113 aa6.22□□□□□ -1.41
Bdnf-206ENSMUST00000111046 E130218I03RikA0A0U1RNU5 63 aa6.22□□□□□ -1.41
Bdnf-206ENSMUST00000111046 1700011M02RikB1AX35 88 aa6.22□□□□□ -1.41
Bdnf-206ENSMUST00000111046 NpwA0A1L1STR8 176 aa6.22□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Gm10518F6UQQ9 182 aa6.22□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Igkv1-35A0A0G2JDE5 120 aa6.21□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Trav13n-2A0A0G2JF93 110 aa6.21□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Spink4O35679 86 aa6.21□□□□□ -1.41
Bdnf-206ENSMUST00000111046 P01755 137 aa6.21□□□□□ -1.41
Bdnf-206ENSMUST00000111046 CrygdP04342 174 aa6.21□□□□□ -1.41
Bdnf-206ENSMUST00000111046 CrygeQ03740 174 aa6.21□□□□□ -1.41
Bdnf-206ENSMUST00000111046 Igkv4-54A0A0G2JES9 117 aa6.21□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Krtap24-1G3X9A2 248 aa6.21□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Gm10577Q3UDV9 132 aa6.21□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Ly6gP35461 111 aa6.21□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Spry2Q9QXV8 315 aa6.21□□□□□ -1.42
Bdnf-206ENSMUST00000111046 AtrQ9JKK8 2635 aa6.2□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Igkv6-13A0A0G2JGY3 119 aa6.2□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Chd6A3KFM7 2711 aa6.2□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Gm9887F6RFI0 207 aa6.2□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Gm10135F6TEE5 83 aa6.2□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Lypd5Q9D7Z7 256 aa6.2□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Defa4P28311 92 aa6.2□□□□□ -1.42
Bdnf-206ENSMUST00000111046 D730001G18RikA0A087WQU7 115 aa6.19□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Gm10647E9Q8X0 124 aa6.19□□□□□ -1.42
Bdnf-206ENSMUST00000111046 CrygaP04345 174 aa6.19□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Cryba4Q9JJV0 196 aa6.19□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Trbv13-2A0A140T8N6 113 aa6.19□□□□□ -1.42
Bdnf-206ENSMUST00000111046 2010109I03RikQ9CQ11 111 aa6.19□□□□□ -1.42
Bdnf-206ENSMUST00000111046 PtprqP0C5E4 2300 aa6.19□□□□□ -1.42
Bdnf-206ENSMUST00000111046 E130114P18RikF6S0S7 154 aa6.18□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Reg3bP35230 175 aa6.18□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Defa16P50714 93 aa6.18□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Pglyrp4Q0VB07 374 aa6.18□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Lamtor3O88653 124 aa6.17□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Acyp1P56376 99 aa6.17□□□□□ -1.42
Bdnf-206ENSMUST00000111046 PolqQ8CGS6 2544 aa6.17□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Cox8cA6H666 72 aa6.17□□□□□ -1.42
Bdnf-206ENSMUST00000111046 CenpwQ3URR0 86 aa6.17□□□□□ -1.42
Bdnf-206ENSMUST00000111046 MrapQ9D159 127 aa6.17□□□□□ -1.42
Bdnf-206ENSMUST00000111046 2310009B15RikA0A0A6YWI4 143 aa6.16□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Klk12B2RVZ0 247 aa6.16□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Gpha2Q925Q5 128 aa6.16□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Foxc1Q61572 553 aa6.16□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Klk11Q9QYN3 276 aa6.16□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Mast4Q811L6 2618 aa6.16□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Zfand2aQ9JII7 171 aa6.16□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Trav3-4A0A075B654 114 aa6.15□□□□□ -1.42
Bdnf-206ENSMUST00000111046 BC048502Q80Y74 154 aa6.15□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Wdr38Q9D994 303 aa6.15□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Hist1h4aP62806 103 aaKnown RBP6.15□□□□□ -1.42
Bdnf-206ENSMUST00000111046 Odf3l2Q3TZ65 277 aa6.15□□□□□ -1.42
Bdnf-206ENSMUST00000111046 A830031A19RikQ8BNT5 113 aa6.15□□□□□ -1.43
Bdnf-206ENSMUST00000111046 MobpQ9D2P8 170 aa6.15□□□□□ -1.43
Bdnf-206ENSMUST00000111046 Igkv3-2A0A075B5P0 119 aa6.14□□□□□ -1.43
Bdnf-206ENSMUST00000111046 Igkv4-61A0A0G2JH00 117 aa6.14□□□□□ -1.43
Bdnf-206ENSMUST00000111046 MifP34884 115 aaKnown RBP6.14□□□□□ -1.43
Bdnf-206ENSMUST00000111046 Cox7b2Q9D2H1 82 aa6.14□□□□□ -1.43
Bdnf-206ENSMUST00000111046 CicQ924A2 2510 aa6.14□□□□□ -1.43
Bdnf-206ENSMUST00000111046 Igkv2-109A0A075B5K6 120 aa6.14□□□□□ -1.43
Bdnf-206ENSMUST00000111046 Igkv8-18A0A0B4J1J3 123 aa6.14□□□□□ -1.43
Bdnf-206ENSMUST00000111046 Gm43218A0A0G2JGT0 114 aa6.14□□□□□ -1.43
Bdnf-206ENSMUST00000111046 Camk2n2Q78WH7 79 aa6.14□□□□□ -1.43
Bdnf-206ENSMUST00000111046 Helz2E9QAM5 2947 aaKnown RBP6.13□□□□□ -1.43
Bdnf-206ENSMUST00000111046 Dmbt1Q60997 2085 aa6.13□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms