RNA–Protein interactions for RNA: ENSMUST00000111046.8

Bdnf-206, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,819 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-206ENSMUST00000111046 Gm35339A0A140LHH9 1649 aa16.63■□□□□ 0.25
Bdnf-206ENSMUST00000111046 NischQ80TM9 1593 aa16.41■□□□□ 0.22
Bdnf-206ENSMUST00000111046 Abcc9P70170 1546 aa16.06■□□□□ 0.16
Bdnf-206ENSMUST00000111046 Rhox8Q6VSS7 320 aa15.95■□□□□ 0.14
Bdnf-206ENSMUST00000111046 Abcc8B2RUS7 1588 aa15.79■□□□□ 0.12
Bdnf-206ENSMUST00000111046 ScribQ80U72 1612 aa15.01□□□□□ -0.01
Bdnf-206ENSMUST00000111046 Dcaf1Q80TR8 1506 aa14.66□□□□□ -0.06
Bdnf-206ENSMUST00000111046 Ccdc136Q3TVA9 1136 aa14.58□□□□□ -0.08
Bdnf-206ENSMUST00000111046 Kdm5dQ62240 1548 aa14.49□□□□□ -0.09
Bdnf-206ENSMUST00000111046 Rtl1Q7M732 1744 aa14.47□□□□□ -0.09
Bdnf-206ENSMUST00000111046 Ccdc180J3QNE4 1664 aa14.41□□□□□ -0.1
Bdnf-206ENSMUST00000111046 Rb1cc1Q9ESK9 1588 aa14.36□□□□□ -0.11
Bdnf-206ENSMUST00000111046 NacadQ5SWP3 1504 aa14.28□□□□□ -0.12
Bdnf-206ENSMUST00000111046 Zcchc6Q5BLK4 1491 aaKnown RBP14.27□□□□□ -0.13
Bdnf-206ENSMUST00000111046 Trim41Q5NCC3 630 aa14.24□□□□□ -0.13
Bdnf-206ENSMUST00000111046 Rpgrip1Q9EPQ2 1331 aa14.24□□□□□ -0.13
Bdnf-206ENSMUST00000111046 Ehmt2Q9Z148 1263 aaKnown RBP14.22□□□□□ -0.13
Bdnf-206ENSMUST00000111046 Baz1aO88379 1555 aa14.2□□□□□ -0.14
Bdnf-206ENSMUST00000111046 HrcG5E8J6 738 aa14.09□□□□□ -0.15
Bdnf-206ENSMUST00000111046 Cngb1E1AZ71 1325 aa14.08□□□□□ -0.16
Bdnf-206ENSMUST00000111046 Sycp2Q9CUU3 1500 aa14.07□□□□□ -0.16
Bdnf-206ENSMUST00000111046 Crybg2B7ZCC2 1516 aa14.03□□□□□ -0.16
Bdnf-206ENSMUST00000111046 Esf1Q3V1V3 845 aaKnown RBP14□□□□□ -0.17
Bdnf-206ENSMUST00000111046 BicraF8VPZ9 1578 aa13.96□□□□□ -0.17
Bdnf-206ENSMUST00000111046 Smarca2Q6DIC0 1577 aa13.96□□□□□ -0.17
Bdnf-206ENSMUST00000111046 Gab3Q8BSM5 595 aa13.92□□□□□ -0.18
Bdnf-206ENSMUST00000111046 Acin1Q9JIX8 1338 aaKnown RBP13.83□□□□□ -0.2
Bdnf-206ENSMUST00000111046 Cecr2E9Q2Z1 1453 aa13.65□□□□□ -0.22
Bdnf-206ENSMUST00000111046 Brd4Q9ESU6 1400 aaKnown RBP13.55□□□□□ -0.24
Bdnf-206ENSMUST00000111046 Npm2Q80W85 207 aa13.54□□□□□ -0.24
Bdnf-206ENSMUST00000111046 Myt1lP97500 1187 aa13.53□□□□□ -0.24
Bdnf-206ENSMUST00000111046 Cep164Q5DU05 1446 aa13.5□□□□□ -0.25
Bdnf-206ENSMUST00000111046 Synj1Q8CHC4 1574 aa13.48□□□□□ -0.25
Bdnf-206ENSMUST00000111046 Chic1Q8CBW7 227 aa13.47□□□□□ -0.25
Bdnf-206ENSMUST00000111046 Zeb1Q64318 1117 aa13.43□□□□□ -0.26
Bdnf-206ENSMUST00000111046 UbtfP25976 765 aaKnown RBP13.36□□□□□ -0.27
Bdnf-206ENSMUST00000111046 Smarca4Q3TKT4 1613 aaKnown RBP13.35□□□□□ -0.27
Bdnf-206ENSMUST00000111046 CftrP26361 1476 aa13.34□□□□□ -0.27
Bdnf-206ENSMUST00000111046 NefmP08553 848 aa13.34□□□□□ -0.27
Bdnf-206ENSMUST00000111046 Top2bQ64511 1612 aa13.32□□□□□ -0.28
Bdnf-206ENSMUST00000111046 Cttnbp2B9EJA2 1648 aa13.32□□□□□ -0.28
Bdnf-206ENSMUST00000111046 Il27Q8K3I6 234 aa13.29□□□□□ -0.28
Bdnf-206ENSMUST00000111046 Las1lA2BE28 776 aaKnown RBP13.29□□□□□ -0.28
Bdnf-206ENSMUST00000111046 Golga3P55937 1487 aa13.28□□□□□ -0.28
Bdnf-206ENSMUST00000111046 Pcgf6Q99NA9 353 aa13.25□□□□□ -0.29
Bdnf-206ENSMUST00000111046 Rsf1E9PWW9 1441 aaKnown RBP13.25□□□□□ -0.29
Bdnf-206ENSMUST00000111046 Wdr66E9Q743 1299 aa13.24□□□□□ -0.29
Bdnf-206ENSMUST00000111046 Iqgap2Q3UQ44 1575 aa13.21□□□□□ -0.29
Bdnf-206ENSMUST00000111046 Mier1Q5UAK0 511 aa13.18□□□□□ -0.3
Bdnf-206ENSMUST00000111046 Cc2d2aQ8CFW7 1633 aa13.14□□□□□ -0.31
Bdnf-206ENSMUST00000111046 Unc13aQ4KUS2 1712 aa13.13□□□□□ -0.31
Bdnf-206ENSMUST00000111046 Ccdc88bQ4QRL3 1481 aa13.13□□□□□ -0.31
Bdnf-206ENSMUST00000111046 Atad2bE9Q166 1460 aaKnown RBP13.1□□□□□ -0.31
Bdnf-206ENSMUST00000111046 Supt5hO55201 1082 aaKnown RBP13.09□□□□□ -0.31
Bdnf-206ENSMUST00000111046 Ap3b1Q9Z1T1 1105 aa13.05□□□□□ -0.32
Bdnf-206ENSMUST00000111046 Mapk8ip2Q9ERE9 830 aa13.04□□□□□ -0.32
Bdnf-206ENSMUST00000111046 Wdr62Q3U3T8 1523 aa13.04□□□□□ -0.32
Bdnf-206ENSMUST00000111046 TnnQ80Z71 1560 aa13.02□□□□□ -0.33
Bdnf-206ENSMUST00000111046 Frmpd1A2AKB4 1549 aa13.01□□□□□ -0.33
Bdnf-206ENSMUST00000111046 Plekhg3Q4VAC9 1341 aa13□□□□□ -0.33
Bdnf-206ENSMUST00000111046 Pds5bQ4VA53 1446 aaKnown RBP12.99□□□□□ -0.33
Bdnf-206ENSMUST00000111046 Thoc2B1AZI6 1594 aaKnown RBP12.98□□□□□ -0.33
Bdnf-206ENSMUST00000111046 Ube2uB1AUC4 352 aa12.98□□□□□ -0.33
Bdnf-206ENSMUST00000111046 Clip1Q922J3 1391 aa12.95□□□□□ -0.34
Bdnf-206ENSMUST00000111046 Npm1Q61937 292 aaKnown RBP12.94□□□□□ -0.34
Bdnf-206ENSMUST00000111046 Top2aQ01320 1528 aaKnown RBP12.92□□□□□ -0.34
Bdnf-206ENSMUST00000111046 Fmn1Q05860 1466 aa12.9□□□□□ -0.34
Bdnf-206ENSMUST00000111046 Eif4g1Q6NZJ6 1600 aaKnown RBP12.87□□□□□ -0.35
Bdnf-206ENSMUST00000111046 TonslQ6NZL6 1363 aa12.86□□□□□ -0.35
Bdnf-206ENSMUST00000111046 Fam50aQ9WV03 339 aaKnown RBP12.86□□□□□ -0.35
Bdnf-206ENSMUST00000111046 Lamc3Q9R0B6 1581 aa12.85□□□□□ -0.35
Bdnf-206ENSMUST00000111046 Kif15Q6P9L6 1387 aa12.85□□□□□ -0.35
Bdnf-206ENSMUST00000111046 Ubl4bQ9CQ84 188 aa12.82□□□□□ -0.36
Bdnf-206ENSMUST00000111046 Ppargc1bQ8VHJ7 1014 aa12.81□□□□□ -0.36
Bdnf-206ENSMUST00000111046 Cep162Q6ZQ06 1403 aa12.8□□□□□ -0.36
Bdnf-206ENSMUST00000111046 Lmod2Q3UHZ5 550 aa12.79□□□□□ -0.36
Bdnf-206ENSMUST00000111046 Ercc6F8VPZ5 1481 aa12.78□□□□□ -0.36
Bdnf-206ENSMUST00000111046 Sall2Q9QX96 1004 aa12.77□□□□□ -0.36
Bdnf-206ENSMUST00000111046 Rapgef2Q8CHG7 1496 aa12.76□□□□□ -0.37
Bdnf-206ENSMUST00000111046 Cdk11bP24788 784 aaKnown RBP12.74□□□□□ -0.37
Bdnf-206ENSMUST00000111046 Setd5Q5XJV7 1441 aa12.73□□□□□ -0.37
Bdnf-206ENSMUST00000111046 Fam135aQ6NS59 1506 aa12.72□□□□□ -0.37
Bdnf-206ENSMUST00000111046 Nop58Q6DFW4 536 aaKnown RBP12.71□□□□□ -0.37
Bdnf-206ENSMUST00000111046 Eid3Q3V124 375 aa12.7□□□□□ -0.38
Bdnf-206ENSMUST00000111046 ClspnQ80YR7 1315 aa12.7□□□□□ -0.38
Bdnf-206ENSMUST00000111046 Ccdc18Q640L5 1455 aa12.69□□□□□ -0.38
Bdnf-206ENSMUST00000111046 Eea1Q8BL66 1411 aa12.68□□□□□ -0.38
Bdnf-206ENSMUST00000111046 Camsap1A2AHC3 1581 aa12.68□□□□□ -0.38
Bdnf-206ENSMUST00000111046 NclP09405 707 aaKnown RBP12.66□□□□□ -0.38
Bdnf-206ENSMUST00000111046 BlmO88700 1416 aa12.65□□□□□ -0.39
Bdnf-206ENSMUST00000111046 PtprkP35822 1457 aa12.63□□□□□ -0.39
Bdnf-206ENSMUST00000111046 Neurod1Q60867 357 aa12.62□□□□□ -0.39
Bdnf-206ENSMUST00000111046 Aebp2Q9Z248 504 aaKnown RBP12.59□□□□□ -0.39
Bdnf-206ENSMUST00000111046 NrkQ9R0G8 1455 aa12.59□□□□□ -0.39
Bdnf-206ENSMUST00000111046 Phldb1Q6PDH0 1371 aaKnown RBP12.54□□□□□ -0.4
Bdnf-206ENSMUST00000111046 Arhgap35Q91YM2 1499 aa12.53□□□□□ -0.4
Bdnf-206ENSMUST00000111046 Grin2bQ01097 1482 aa12.52□□□□□ -0.4
Bdnf-206ENSMUST00000111046 Stra8P70278 393 aa12.52□□□□□ -0.41
Bdnf-206ENSMUST00000111046 Cux2P70298 1426 aa12.51□□□□□ -0.41
Bdnf-206ENSMUST00000111046 Shroom4Q1W617 1475 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 117.2 ms