RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Gm6812B1AXU1 112 aa10.23□□□□□ -0.77
Nup88-202ENSMUST00000108530 Igkv1-99F6XWB2 120 aa10.23□□□□□ -0.77
Nup88-202ENSMUST00000108530 Dmrt3Q80WT2 476 aa10.23□□□□□ -0.77
Nup88-202ENSMUST00000108530 MobpQ9D2P8 170 aa10.23□□□□□ -0.77
Nup88-202ENSMUST00000108530 Ighv8-5A0A0A6YY60 119 aa10.23□□□□□ -0.77
Nup88-202ENSMUST00000108530 4930546C10RikE9Q4Y3 121 aa10.23□□□□□ -0.77
Nup88-202ENSMUST00000108530 Klk9Q32M27 251 aa10.22□□□□□ -0.77
Nup88-202ENSMUST00000108530 6430550D23RikE9Q1X6 194 aa10.22□□□□□ -0.77
Nup88-202ENSMUST00000108530 Gm11444F6QMA6 170 aa10.22□□□□□ -0.77
Nup88-202ENSMUST00000108530 Cdip1Q9DB75 208 aa10.22□□□□□ -0.77
Nup88-202ENSMUST00000108530 Trav13n-1A0A0G2JEU8 110 aa10.21□□□□□ -0.77
Nup88-202ENSMUST00000108530 Smr3aQ61900 147 aa10.21□□□□□ -0.77
Nup88-202ENSMUST00000108530 Odf3l2Q3TZ65 277 aa10.21□□□□□ -0.78
Nup88-202ENSMUST00000108530 Ighv1-62-1A0A075B5U3 116 aa10.2□□□□□ -0.78
Nup88-202ENSMUST00000108530 Trav13d-4A0A0G2JFX3 110 aa10.2□□□□□ -0.78
Nup88-202ENSMUST00000108530 Dnah3Q8BW94 4083 aa10.19□□□□□ -0.78
Nup88-202ENSMUST00000108530 Rpl13aP19253 203 aaKnown RBP10.19□□□□□ -0.78
Nup88-202ENSMUST00000108530 Cks1bP61025 79 aa10.19□□□□□ -0.78
Nup88-202ENSMUST00000108530 Defb47Q30KN1 79 aa10.19□□□□□ -0.78
Nup88-202ENSMUST00000108530 Gatd1Q8BFQ8 220 aa10.19□□□□□ -0.78
Nup88-202ENSMUST00000108530 NpwA0A1L1STR8 176 aa10.17□□□□□ -0.78
Nup88-202ENSMUST00000108530 Trav11A0A0B4J1J9 114 aa10.17□□□□□ -0.78
Nup88-202ENSMUST00000108530 4930432M17RikQ3V0W9 174 aa10.17□□□□□ -0.78
Nup88-202ENSMUST00000108530 Trav7-6A0A075B640 112 aa10.16□□□□□ -0.78
Nup88-202ENSMUST00000108530 Zfp951A0A087WRH0 451 aa10.16□□□□□ -0.78
Nup88-202ENSMUST00000108530 Morn5Q9DAI9 170 aa10.16□□□□□ -0.78
Nup88-202ENSMUST00000108530 Igkv6-13A0A0G2JGY3 119 aa10.16□□□□□ -0.78
Nup88-202ENSMUST00000108530 Gm10135F6TEE5 83 aa10.16□□□□□ -0.78
Nup88-202ENSMUST00000108530 Ly6gP35461 111 aa10.16□□□□□ -0.78
Nup88-202ENSMUST00000108530 Tac4Q99N14 128 aa10.16□□□□□ -0.78
Nup88-202ENSMUST00000108530 Ighv8-11A0A075B5X4 119 aa10.15□□□□□ -0.78
Nup88-202ENSMUST00000108530 Sslp1Q3UN54 99 aa10.15□□□□□ -0.78
Nup88-202ENSMUST00000108530 Prelid3aQ8VE85 172 aa10.15□□□□□ -0.78
Nup88-202ENSMUST00000108530 Gm9936Q8C864 160 aa10.15□□□□□ -0.79
Nup88-202ENSMUST00000108530 Bles03Q8VD62 251 aa10.15□□□□□ -0.79
Nup88-202ENSMUST00000108530 Gm11020F6ZGD5 61 aa10.14□□□□□ -0.79
Nup88-202ENSMUST00000108530 Ighv8-13A0A075B5Y0 101 aa10.13□□□□□ -0.79
Nup88-202ENSMUST00000108530 Anapc13Q8R034 74 aa10.13□□□□□ -0.79
Nup88-202ENSMUST00000108530 Q9DAQ5 155 aa10.13□□□□□ -0.79
Nup88-202ENSMUST00000108530 TnxbO35452 4006 aa10.13□□□□□ -0.79
Nup88-202ENSMUST00000108530 Igkv3-9A0A140T8P4 119 aa10.12□□□□□ -0.79
Nup88-202ENSMUST00000108530 9430069I07RikQ9CX21 111 aa10.11□□□□□ -0.79
Nup88-202ENSMUST00000108530 Igkv8-34A0A0G2JDU0 121 aa10.1□□□□□ -0.79
Nup88-202ENSMUST00000108530 Trav9d-4A0A0G2JG37 103 aa10.1□□□□□ -0.79
Nup88-202ENSMUST00000108530 Dnah7bL7N1Y0 4068 aa10.1□□□□□ -0.79
Nup88-202ENSMUST00000108530 4930544G11RikQ9CR99 193 aa10.1□□□□□ -0.79
Nup88-202ENSMUST00000108530 Zfand2aQ9JII7 171 aa10.1□□□□□ -0.79
Nup88-202ENSMUST00000108530 4930442H23RikQ9D5G7 103 aa10.09□□□□□ -0.79
Nup88-202ENSMUST00000108530 Snhg11Q4G0K9 87 aa10.09□□□□□ -0.79
Nup88-202ENSMUST00000108530 4930415O20RikQ8CDT5 131 aa10.09□□□□□ -0.79
Nup88-202ENSMUST00000108530 Pkd1l1Q8R526 2615 aa10.08□□□□□ -0.8
Nup88-202ENSMUST00000108530 Trav9n-4A0A075B631 113 aa10.08□□□□□ -0.8
Nup88-202ENSMUST00000108530 Krtap11-1E9Q2E9 183 aa10.08□□□□□ -0.8
Nup88-202ENSMUST00000108530 P01755 137 aa10.08□□□□□ -0.8
Nup88-202ENSMUST00000108530 Prss58Q8BW11 241 aa10.08□□□□□ -0.8
Nup88-202ENSMUST00000108530 Trav4-3A0A0B4J1K1 110 aa10.07□□□□□ -0.8
Nup88-202ENSMUST00000108530 B230359F08RikA0A0B4J1K3 109 aa10.07□□□□□ -0.8
Nup88-202ENSMUST00000108530 Glrp1E9Q9S8 174 aa10.07□□□□□ -0.8
Nup88-202ENSMUST00000108530 Tmem223Q9CQE2 199 aaKnown RBP10.07□□□□□ -0.8
Nup88-202ENSMUST00000108530 Defb50Q6TU36 73 aa10.07□□□□□ -0.8
Nup88-202ENSMUST00000108530 Lgals4Q8K419 326 aa10.07□□□□□ -0.8
Nup88-202ENSMUST00000108530 Sostdc1Q9CQN4 206 aa10.07□□□□□ -0.8
Nup88-202ENSMUST00000108530 Psors1c2Q80ZC9 134 aa10.06□□□□□ -0.8
Nup88-202ENSMUST00000108530 Igkv3-1A0A075B5P1 119 aa10.06□□□□□ -0.8
Nup88-202ENSMUST00000108530 Gm29423A0A087WRM1 55 aa10.06□□□□□ -0.8
Nup88-202ENSMUST00000108530 Rpl32-psP17932 135 aa10.06□□□□□ -0.8
Nup88-202ENSMUST00000108530 CirbpP60824 172 aaKnown RBP10.06□□□□□ -0.8
Nup88-202ENSMUST00000108530 Ss18l2Q9D174 77 aa10.06□□□□□ -0.8
Nup88-202ENSMUST00000108530 1700011M02RikB1AX35 88 aa10.05□□□□□ -0.8
Nup88-202ENSMUST00000108530 Defa2P28309 93 aa10.05□□□□□ -0.8
Nup88-202ENSMUST00000108530 Gm4861Q8C5A4 106 aa10.05□□□□□ -0.8
Nup88-202ENSMUST00000108530 AplnQ9R0R4 77 aa10.04□□□□□ -0.8
Nup88-202ENSMUST00000108530 Gm16181B0V2H2 73 aa10.04□□□□□ -0.8
Nup88-202ENSMUST00000108530 1700010B08RikQ9DAI7 102 aa10.04□□□□□ -0.8
Nup88-202ENSMUST00000108530 1700020N15RikL7MTX3 112 aa10.03□□□□□ -0.8
Nup88-202ENSMUST00000108530 Reg3bP35230 175 aa10.03□□□□□ -0.8
Nup88-202ENSMUST00000108530 Sprr1bQ62267 153 aa10.03□□□□□ -0.8
Nup88-202ENSMUST00000108530 EnhoQ8K1D8 76 aa10.03□□□□□ -0.8
Nup88-202ENSMUST00000108530 Pfn2Q9JJV2 140 aa10.03□□□□□ -0.8
Nup88-202ENSMUST00000108530 Csmd3Q80T79 3707 aa10.03□□□□□ -0.8
Nup88-202ENSMUST00000108530 Trav13-1A0A075B644 110 aa10.03□□□□□ -0.8
Nup88-202ENSMUST00000108530 Gm9508A0A1W2P7W0 230 aa10.02□□□□□ -0.8
Nup88-202ENSMUST00000108530 Timm17bQ9Z0V7 172 aa10.02□□□□□ -0.8
Nup88-202ENSMUST00000108530 Ighv13-2A0A0A6YWN3 119 aa10.02□□□□□ -0.81
Nup88-202ENSMUST00000108530 Gm10251J3QPM5 127 aa10.02□□□□□ -0.81
Nup88-202ENSMUST00000108530 Eif4ebp3Q80VV3 101 aa10.01□□□□□ -0.81
Nup88-202ENSMUST00000108530 Ighv1-61P01749 117 aa10.01□□□□□ -0.81
Nup88-202ENSMUST00000108530 Prr13Q9CQJ5 137 aa10.01□□□□□ -0.81
Nup88-202ENSMUST00000108530 FcgbpE9Q0B5 2583 aa10.01□□□□□ -0.81
Nup88-202ENSMUST00000108530 Lyrm7Q9DA03 104 aa10□□□□□ -0.81
Nup88-202ENSMUST00000108530 Trav4d-3A0A075B625 110 aa10□□□□□ -0.81
Nup88-202ENSMUST00000108530 E130208F15RikQ3UPV3 143 aa10□□□□□ -0.81
Nup88-202ENSMUST00000108530 PemtQ61907 199 aa10□□□□□ -0.81
Nup88-202ENSMUST00000108530 Gm6793B2RXM2 351 aa9.99□□□□□ -0.81
Nup88-202ENSMUST00000108530 Dnah17Q69Z23 4481 aa9.99□□□□□ -0.81
Nup88-202ENSMUST00000108530 Gm10647E9Q8X0 124 aa9.99□□□□□ -0.81
Nup88-202ENSMUST00000108530 Gm10767Q3TQP0 103 aa9.99□□□□□ -0.81
Nup88-202ENSMUST00000108530 SpinklQ8CEK3 90 aa9.99□□□□□ -0.81
Nup88-202ENSMUST00000108530 2010109I03RikQ9CQ11 111 aa9.98□□□□□ -0.81
Nup88-202ENSMUST00000108530 Gm17349F7BGH6 99 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms