Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Gm25239-201ENSMUST00000174915 86 ntBASIC28.13■■■□□ 2.09
Csmd3Q80T79 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Csmd3Q80T79 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Csmd3Q80T79 Gm24109-201ENSMUST00000175489 103 ntBASIC24.77■■□□□ 1.56
Csmd3Q80T79 Gm15042-201ENSMUST00000120212 883 ntBASIC24.04■■□□□ 1.44
Csmd3Q80T79 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Csmd3Q80T79 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Csmd3Q80T79 Gm15045-201ENSMUST00000117359 883 ntBASIC23.69■■□□□ 1.38
Csmd3Q80T79 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Csmd3Q80T79 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Csmd3Q80T79 Gm23366-201ENSMUST00000175022 89 ntBASIC23.24■■□□□ 1.31
Csmd3Q80T79 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.07■■□□□ 1.28
Csmd3Q80T79 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.98■■□□□ 1.27
Csmd3Q80T79 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Csmd3Q80T79 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
Csmd3Q80T79 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Csmd3Q80T79 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Csmd3Q80T79 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Csmd3Q80T79 Gm25238-201ENSMUST00000174914 89 ntBASIC22.43■■□□□ 1.18
Csmd3Q80T79 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.39■■□□□ 1.17
Csmd3Q80T79 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Csmd3Q80T79 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Csmd3Q80T79 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Csmd3Q80T79 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Csmd3Q80T79 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Csmd3Q80T79 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Csmd3Q80T79 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Csmd3Q80T79 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Csmd3Q80T79 Gm25262-201ENSMUST00000174934 133 ntBASIC21.67■■□□□ 1.06
Csmd3Q80T79 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.62■■□□□ 1.05
Csmd3Q80T79 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Csmd3Q80T79 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.54■■□□□ 1.04
Csmd3Q80T79 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Csmd3Q80T79 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Csmd3Q80T79 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Csmd3Q80T79 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.43■■□□□ 1.02
Csmd3Q80T79 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Csmd3Q80T79 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Csmd3Q80T79 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Csmd3Q80T79 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.32■■□□□ 1
Csmd3Q80T79 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.29■■□□□ 1
Csmd3Q80T79 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Csmd3Q80T79 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Csmd3Q80T79 Gm26115-201ENSMUST00000175605 87 ntBASIC21.18■□□□□ 0.98
Csmd3Q80T79 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.18■□□□□ 0.98
Csmd3Q80T79 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.17■□□□□ 0.98
Csmd3Q80T79 Gm27325-201ENSMUST00000175467 74 ntBASIC21.13■□□□□ 0.97
Csmd3Q80T79 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Csmd3Q80T79 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Csmd3Q80T79 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.06■□□□□ 0.96
Csmd3Q80T79 Gm8109-201ENSMUST00000194076 746 ntBASIC21■□□□□ 0.95
Csmd3Q80T79 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Csmd3Q80T79 Rab21-202ENSMUST00000218831 843 ntBASIC20.95■□□□□ 0.94
Csmd3Q80T79 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Csmd3Q80T79 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Csmd3Q80T79 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Csmd3Q80T79 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.84■□□□□ 0.93
Csmd3Q80T79 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.8■□□□□ 0.92
Csmd3Q80T79 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Csmd3Q80T79 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Csmd3Q80T79 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Csmd3Q80T79 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.75■□□□□ 0.91
Csmd3Q80T79 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Csmd3Q80T79 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Csmd3Q80T79 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.56■□□□□ 0.88
Csmd3Q80T79 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.53■□□□□ 0.88
Csmd3Q80T79 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.53■□□□□ 0.88
Csmd3Q80T79 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Csmd3Q80T79 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Csmd3Q80T79 Gm24804-201ENSMUST00000174982 85 ntBASIC20.48■□□□□ 0.87
Csmd3Q80T79 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Csmd3Q80T79 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Csmd3Q80T79 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csmd3Q80T79 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csmd3Q80T79 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.35■□□□□ 0.85
Csmd3Q80T79 Psd-208ENSMUST00000224556 2034 ntBASIC20.33■□□□□ 0.85
Csmd3Q80T79 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Csmd3Q80T79 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Csmd3Q80T79 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.26■□□□□ 0.83
Csmd3Q80T79 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Csmd3Q80T79 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Csmd3Q80T79 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.2■□□□□ 0.82
Csmd3Q80T79 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Csmd3Q80T79 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.17■□□□□ 0.82
Csmd3Q80T79 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Csmd3Q80T79 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.14■□□□□ 0.81
Csmd3Q80T79 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Csmd3Q80T79 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Csmd3Q80T79 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.12■□□□□ 0.81
Csmd3Q80T79 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Csmd3Q80T79 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.09■□□□□ 0.81
Csmd3Q80T79 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Csmd3Q80T79 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Csmd3Q80T79 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.01■□□□□ 0.79
Csmd3Q80T79 Zfp131-205ENSMUST00000223812 663 ntBASIC20■□□□□ 0.79
Csmd3Q80T79 Gm27322-201ENSMUST00000184007 104 ntBASIC19.99■□□□□ 0.79
Csmd3Q80T79 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Csmd3Q80T79 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.98■□□□□ 0.79
Csmd3Q80T79 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Csmd3Q80T79 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms