RNA–Protein interactions for RNA: ENSMUST00000047207.6

Ccdc27-201, Transcript of Coiled-coil domain-containing protein 27, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc27, Length 2,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27-201ENSMUST00000047207 Gm10308Q9CVR5 141 aa9.86□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Sorl1O88307 2215 aaKnown RBP9.86□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Trav9d-3A0A075B695 113 aa9.86□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 B230359F08RikA0A0B4J1K3 109 aa9.86□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 GhrhP16043 103 aa9.86□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 NbasE9Q411 2356 aa9.85□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Akap6E9Q9K8 2307 aa9.85□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Ighv1-49A0A0A6YWX2 117 aa9.85□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Gm7075D3Z497 112 aa9.85□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Gm7102J3QQ10 178 aa9.85□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Defa21Q8C1P2 93 aa9.85□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Gpha2Q925Q5 128 aa9.85□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Trav13d-4A0A0G2JFX3 110 aa9.84□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Inafm2A0A1L1STD6 152 aa9.84□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Krtap16-1A2A5X5 502 aa9.84□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Prp2P05143 317 aa9.84□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 H2al1aQ5M8Q2 105 aa9.84□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Q9DAA7 145 aa9.84□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Ighv10-3A0A075B5T6 119 aa9.84□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Rpl39lQ9CQD0 51 aa9.84□□□□□ -0.83
Ccdc27-201ENSMUST00000047207 Prpf8Q99PV0 2335 aaKnown RBP9.83□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Trav13n-2A0A0G2JF93 110 aa9.83□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 9430015G10RikA2ASP7 199 aa9.83□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 PrlhG3UWC3 86 aa9.83□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Sprr1bQ62267 153 aa9.83□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Ighv1-59A0A0A6YXE0 117 aa9.82□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Tmem86bQ497J1 226 aa9.82□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Ighv2-9A0A075B5Q5 116 aa9.81□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Rnase1P00683 149 aa9.81□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 E130208F15RikQ3UPV3 143 aa9.81□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Ormdl1Q921I0 153 aa9.81□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Gm5153P01627 120 aa9.81□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Cox7a1P56392 80 aa9.81□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Smlr1J3QMJ4 66 aa9.8□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Naa38Q9D2U5 125 aa9.8□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Igkv8-18A0A0B4J1J3 123 aa9.79□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 P01819 144 aa9.79□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Trav13-1A0A075B644 110 aa9.79□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Igkv8-21A0A140T8P7 120 aa9.79□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Psors1c2Q80ZC9 134 aa9.79□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Gm9903Q8C9Y8 129 aa9.78□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Spink4O35679 86 aa9.78□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Lyrm9Q3UN90 78 aa9.78□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Qrich2A0A140LIY9 2337 aa9.78□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Gm9195A0A140LHT4 2805 aa9.77□□□□□ -0.84
Ccdc27-201ENSMUST00000047207 Odf3l2Q3TZ65 277 aa9.77□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Fam19a5Q91WE9 132 aa9.77□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Ubl5Q9EPV8 73 aa9.77□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Col6a4A2AX52 2309 aa9.77□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Ep300B2RWS6 2412 aa9.77□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 CnbpP53996 178 aaKnown RBP9.76□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Defb18Q30KP5 85 aa9.76□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Fam19a1Q7TPG8 133 aa9.76□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Ighv2-5A0A0A6YY69 116 aa9.75□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 EnhoQ8K1D8 76 aa9.75□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Bles03Q8VD62 251 aa9.75□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Ndufc1Q9CQY9 76 aa9.75□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Tomm7Q9D173 55 aa9.74□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Svep1A2AVA0 3567 aa9.74□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Defa23Q5G866 93 aa9.73□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Igkv8-26A0A075B5N5 123 aa9.73□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Ighv13-2A0A0A6YWN3 119 aa9.72□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Igkv8-27A0A0G2JF28 120 aa9.72□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Igkv8-30A0A140T8M3 121 aa9.72□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Igkv2-109A0A075B5K6 120 aa9.71□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Csmd2V9GX34 3611 aa9.71□□□□□ -0.85
Ccdc27-201ENSMUST00000047207 Tcl1b5P56845 121 aa9.71□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Defb26Q30KN7 186 aa9.71□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 4930535I16RikQ9CUI2 172 aa9.71□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Itpr3P70227 2670 aa9.7□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Cox7bP56393 80 aa9.7□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 NrgnP60761 78 aa9.7□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 BaalcQ8VHV1 145 aa9.7□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 E130114P18RikF6S0S7 154 aa9.7□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Igkv4-53A0A0G2JFC6 119 aa9.69□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 C530025M09RikF6RGA8 229 aa9.69□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Rpl35aO55142 110 aa9.69□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Gm9913Q8BQQ2 135 aa9.69□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 4930556J24RikQ9D4U7 146 aa9.69□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Pla2g1bQ9Z0Y2 146 aa9.69□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Pkd1l2Q7TN88 2461 aa9.69□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Muc4Q8JZM8 3443 aa9.69□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Ighv10-1A0A0B4J1J6 119 aa9.68□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 B230307C23RikQ8BLB2 64 aa9.68□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Arid1bE9Q4N7 2244 aa9.68□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Klk12B2RVZ0 247 aa9.67□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Gm10320E9PW43 113 aa9.67□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Serp1Q9Z1W5 66 aa9.67□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Trav9n-4A0A075B631 113 aa9.67□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 CrygeQ03740 174 aa9.67□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Notch3Q61982 2318 aa9.66□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Pde6gP09174 87 aa9.66□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Fam229bQ8CF36 80 aa9.66□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Trav13-2A0A075B649 110 aa9.65□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Gm7257D3YX25 99 aa9.65□□□□□ -0.86
Ccdc27-201ENSMUST00000047207 Igkv1-110A0A0B4J1I0 119 aa9.64□□□□□ -0.87
Ccdc27-201ENSMUST00000047207 Igkv4-61A0A0G2JH00 117 aa9.64□□□□□ -0.87
Ccdc27-201ENSMUST00000047207 Gm10337F7DEP7 55 aa9.64□□□□□ -0.87
Ccdc27-201ENSMUST00000047207 Brk1Q91VR8 75 aa9.64□□□□□ -0.87
Ccdc27-201ENSMUST00000047207 MplkipQ9D011 178 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 109.9 ms