RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 Hivep2Q3UHF7 2430 aa10.61□□□□□ -0.71
Tpm1-209ENSMUST00000113690 Defa16P50714 93 aa10.6□□□□□ -0.71
Tpm1-209ENSMUST00000113690 Timm17bQ9Z0V7 172 aa10.6□□□□□ -0.71
Tpm1-209ENSMUST00000113690 P01786 117 aa10.6□□□□□ -0.71
Tpm1-209ENSMUST00000113690 4930544G11RikQ9CR99 193 aa10.6□□□□□ -0.71
Tpm1-209ENSMUST00000113690 Wnk1P83741 2377 aa10.6□□□□□ -0.71
Tpm1-209ENSMUST00000113690 Smlr1J3QMJ4 66 aa10.59□□□□□ -0.71
Tpm1-209ENSMUST00000113690 CirbpP60824 172 aaKnown RBP10.59□□□□□ -0.71
Tpm1-209ENSMUST00000113690 Fam110dQ80X91 271 aa10.59□□□□□ -0.71
Tpm1-209ENSMUST00000113690 Cox17P56394 63 aa10.58□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Fgfbp3Q1HCM0 245 aa10.58□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Gm10322F7D7I4 111 aa10.58□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Gatd1Q8BFQ8 220 aa10.58□□□□□ -0.72
Tpm1-209ENSMUST00000113690 CubnQ9JLB4 3623 aa10.58□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Trav14d-3-dv8A0A075B619 120 aa10.57□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Trbv30A0A0B4J1P1 111 aa10.57□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Trav9d-4A0A0G2JG37 103 aa10.57□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Atp5eP56382 52 aa10.57□□□□□ -0.72
Tpm1-209ENSMUST00000113690 SelenowP63300 88 aa10.57□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Trav4-3A0A0B4J1K1 110 aa10.57□□□□□ -0.72
Tpm1-209ENSMUST00000113690 BB014433Q8C5R5 389 aa10.57□□□□□ -0.72
Tpm1-209ENSMUST00000113690 1700010B08RikQ9DAI7 102 aa10.56□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Trav13-4-dv7A0A075B6C2 110 aa10.56□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Defa2P28309 93 aa10.56□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Cd164l2Q9D6W7 172 aa10.56□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Ighv1-62-1A0A075B5U3 116 aa10.55□□□□□ -0.72
Tpm1-209ENSMUST00000113690 1700011M02RikB1AX35 88 aa10.55□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Gm17472A0A075B683 117 aa10.55□□□□□ -0.72
Tpm1-209ENSMUST00000113690 P01745 121 aa10.55□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Ucn2Q99ML8 113 aa10.55□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Lst1O08843 95 aa10.55□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Pfn2Q9JJV2 140 aa10.54□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Xirp2Q4U4S6 3784 aa10.54□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Apoc4Q61268 124 aa10.54□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Il19Q8CJ70 176 aa10.54□□□□□ -0.72
Tpm1-209ENSMUST00000113690 SbsponQ3UPR9 264 aa10.53□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Igkv1-35A0A0G2JDE5 120 aa10.53□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Gm7257D3YX25 99 aa10.52□□□□□ -0.72
Tpm1-209ENSMUST00000113690 Gm3443F7CCV5 94 aa10.52□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Defb29Q8BGW9 78 aa10.52□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Trav9d-3A0A075B695 113 aa10.51□□□□□ -0.73
Tpm1-209ENSMUST00000113690 PrlhG3UWC3 86 aa10.51□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Defa25Q5G864 92 aa10.51□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Gm10647E9Q8X0 124 aa10.51□□□□□ -0.73
Tpm1-209ENSMUST00000113690 PemtQ61907 199 aa10.51□□□□□ -0.73
Tpm1-209ENSMUST00000113690 5730596B20RikQ8BQ08 205 aa10.51□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Gm9913Q8BQQ2 135 aa10.51□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Sh2d1aO88890 126 aa10.5□□□□□ -0.73
Tpm1-209ENSMUST00000113690 SmcpP15265 143 aa10.5□□□□□ -0.73
Tpm1-209ENSMUST00000113690 D130052B06RikQ3UW13 202 aa10.5□□□□□ -0.73
Tpm1-209ENSMUST00000113690 MalO09198 153 aa10.5□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Tfpi2O35536 230 aa10.5□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Mapk1ip1lQ8BH93 242 aa10.5□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Crlf1Q9JM58 425 aa10.5□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Myo9aQ8C170 2542 aa10.49□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Plac8l1Q08EJ0 177 aa10.49□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Gm10300Q8C8P7 189 aa10.49□□□□□ -0.73
Tpm1-209ENSMUST00000113690 B230359F08RikA0A0B4J1K3 109 aa10.49□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Ighv1-61P01749 117 aa10.49□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Rpl36aP83882 106 aaKnown RBP10.48□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Nop10Q9CQS2 64 aa10.48□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Trav11A0A0B4J1J9 114 aa10.48□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Fxyd5P97808 178 aa10.48□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Cdc42se2Q8BGH7 84 aa10.48□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Bles03Q8VD62 251 aa10.48□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Q99M08 65 aa10.47□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Cep192E9Q4Y4 2514 aaKnown RBP10.47□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Igkv1-117A0A140T8M0 119 aa10.46□□□□□ -0.73
Tpm1-209ENSMUST00000113690 Vmo1Q5SXG7 201 aa10.46□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Ndufa12Q7TMF3 145 aaKnown RBP10.46□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Rif1Q6PR54 2419 aaKnown RBP10.46□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Gm20726G3UX18 150 aa10.45□□□□□ -0.74
Tpm1-209ENSMUST00000113690 P01755 137 aa10.45□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Cox6b1P56391 86 aaKnown RBP10.45□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Muc2Q80Z19 2680 aa10.44□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Cox7a1P56392 80 aa10.44□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Brwd1Q921C3 2304 aa10.44□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Trav13d-4A0A0G2JFX3 110 aa10.44□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Igf1P05017 153 aa10.44□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Csdc2Q91YQ3 154 aa10.44□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Ighv1-49A0A0A6YWX2 117 aa10.43□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Srsf12Q8C8K3 266 aa10.43□□□□□ -0.74
Tpm1-209ENSMUST00000113690 4930524J08RikQ9CUJ5 163 aa10.43□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Lypd5Q9D7Z7 256 aa10.43□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Ighv8-11A0A075B5X4 119 aa10.42□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Igkv6-13A0A0G2JGY3 119 aa10.42□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Gm7075D3Z497 112 aa10.42□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Trav13n-2A0A0G2JF93 110 aa10.42□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Rpl35aO55142 110 aa10.42□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Gm3618D3Z4P5 127 aa10.41□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Prss58Q8BW11 241 aa10.41□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Gm2916Q9D9B9 127 aa10.41□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Trav13-1A0A075B644 110 aa10.41□□□□□ -0.74
Tpm1-209ENSMUST00000113690 4930546C10RikE9Q4Y3 121 aa10.41□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Gm8439G3UWA7 96 aa10.41□□□□□ -0.74
Tpm1-209ENSMUST00000113690 GfyJ3KML8 504 aa10.41□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Defb18Q30KP5 85 aa10.41□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Gm10577Q3UDV9 132 aa10.41□□□□□ -0.74
Tpm1-209ENSMUST00000113690 ScxQ64124 207 aa10.41□□□□□ -0.74
Tpm1-209ENSMUST00000113690 Defb42Q8BVB5 75 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms