RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 NischQ80TM9 1593 aa26.97■■□□□ 1.91
Tpm1-209ENSMUST00000113690 Abcc9P70170 1546 aa26.11■■□□□ 1.77
Tpm1-209ENSMUST00000113690 Rhox8Q6VSS7 320 aa25.97■■□□□ 1.75
Tpm1-209ENSMUST00000113690 Gm35339A0A140LHH9 1649 aa25.95■■□□□ 1.74
Tpm1-209ENSMUST00000113690 Abcc8B2RUS7 1588 aa25.41■■□□□ 1.66
Tpm1-209ENSMUST00000113690 Rtl1Q7M732 1744 aa25.33■■□□□ 1.65
Tpm1-209ENSMUST00000113690 Ccdc180J3QNE4 1664 aa25.13■■□□□ 1.61
Tpm1-209ENSMUST00000113690 Rpgrip1Q9EPQ2 1331 aa24.76■■□□□ 1.55
Tpm1-209ENSMUST00000113690 Ehmt2Q9Z148 1263 aaKnown RBP24.58■■□□□ 1.53
Tpm1-209ENSMUST00000113690 Zcchc6Q5BLK4 1491 aaKnown RBP24.53■■□□□ 1.52
Tpm1-209ENSMUST00000113690 Acin1Q9JIX8 1338 aaKnown RBP24.41■■□□□ 1.5
Tpm1-209ENSMUST00000113690 Ccdc136Q3TVA9 1136 aa24.09■■□□□ 1.45
Tpm1-209ENSMUST00000113690 HrcG5E8J6 738 aa23.97■■□□□ 1.43
Tpm1-209ENSMUST00000113690 Pcgf6Q99NA9 353 aa23.85■■□□□ 1.41
Tpm1-209ENSMUST00000113690 Dcaf1Q80TR8 1506 aa23.85■■□□□ 1.41
Tpm1-209ENSMUST00000113690 Rb1cc1Q9ESK9 1588 aa23.68■■□□□ 1.38
Tpm1-209ENSMUST00000113690 Trim41Q5NCC3 630 aa23.64■■□□□ 1.37
Tpm1-209ENSMUST00000113690 ScribQ80U72 1612 aa23.49■■□□□ 1.35
Tpm1-209ENSMUST00000113690 Supt5hO55201 1082 aaKnown RBP23.41■■□□□ 1.34
Tpm1-209ENSMUST00000113690 Baz1aO88379 1555 aa23.33■■□□□ 1.33
Tpm1-209ENSMUST00000113690 Kdm5dQ62240 1548 aa23.19■■□□□ 1.3
Tpm1-209ENSMUST00000113690 Cep164Q5DU05 1446 aa23.12■■□□□ 1.29
Tpm1-209ENSMUST00000113690 Gab3Q8BSM5 595 aa23.05■■□□□ 1.28
Tpm1-209ENSMUST00000113690 Zeb1Q64318 1117 aa23.03■■□□□ 1.28
Tpm1-209ENSMUST00000113690 Neurod1Q60867 357 aa22.99■■□□□ 1.27
Tpm1-209ENSMUST00000113690 Cngb1E1AZ71 1325 aa22.94■■□□□ 1.26
Tpm1-209ENSMUST00000113690 Chic1Q8CBW7 227 aa22.94■■□□□ 1.26
Tpm1-209ENSMUST00000113690 Smarca2Q6DIC0 1577 aa22.84■■□□□ 1.25
Tpm1-209ENSMUST00000113690 NacadQ5SWP3 1504 aa22.82■■□□□ 1.24
Tpm1-209ENSMUST00000113690 Rsf1E9PWW9 1441 aaKnown RBP22.81■■□□□ 1.24
Tpm1-209ENSMUST00000113690 Mier1Q5UAK0 511 aa22.75■■□□□ 1.23
Tpm1-209ENSMUST00000113690 Sall2Q9QX96 1004 aa22.65■■□□□ 1.22
Tpm1-209ENSMUST00000113690 NefmP08553 848 aa22.62■■□□□ 1.21
Tpm1-209ENSMUST00000113690 Ccdc88bQ4QRL3 1481 aa22.6■■□□□ 1.21
Tpm1-209ENSMUST00000113690 Crybg2B7ZCC2 1516 aa22.56■■□□□ 1.2
Tpm1-209ENSMUST00000113690 Cecr2E9Q2Z1 1453 aa22.4■■□□□ 1.18
Tpm1-209ENSMUST00000113690 Brd4Q9ESU6 1400 aaKnown RBP22.38■■□□□ 1.17
Tpm1-209ENSMUST00000113690 Golga3P55937 1487 aa22.36■■□□□ 1.17
Tpm1-209ENSMUST00000113690 UbtfP25976 765 aaKnown RBP22.35■■□□□ 1.17
Tpm1-209ENSMUST00000113690 Wdr66E9Q743 1299 aa22.32■■□□□ 1.16
Tpm1-209ENSMUST00000113690 Sycp2Q9CUU3 1500 aa22.32■■□□□ 1.16
Tpm1-209ENSMUST00000113690 Las1lA2BE28 776 aaKnown RBP22.31■■□□□ 1.16
Tpm1-209ENSMUST00000113690 Esf1Q3V1V3 845 aaKnown RBP22.3■■□□□ 1.16
Tpm1-209ENSMUST00000113690 Ppargc1bQ8VHJ7 1014 aa22.29■■□□□ 1.16
Tpm1-209ENSMUST00000113690 Csrnp3P59055 597 aa22.28■■□□□ 1.16
Tpm1-209ENSMUST00000113690 Aebp2Q9Z248 504 aaKnown RBP22.28■■□□□ 1.16
Tpm1-209ENSMUST00000113690 Synj1Q8CHC4 1574 aa22.24■■□□□ 1.15
Tpm1-209ENSMUST00000113690 1700123L14RikQ3V2K7 440 aa22.23■■□□□ 1.15
Tpm1-209ENSMUST00000113690 Anks4bQ8K3X6 423 aa22.21■■□□□ 1.15
Tpm1-209ENSMUST00000113690 Myt1lP97500 1187 aa22.05■■□□□ 1.12
Tpm1-209ENSMUST00000113690 Cdk11bP24788 784 aaKnown RBP22■■□□□ 1.11
Tpm1-209ENSMUST00000113690 Nop58Q6DFW4 536 aaKnown RBP21.99■■□□□ 1.11
Tpm1-209ENSMUST00000113690 CftrP26361 1476 aa21.99■■□□□ 1.11
Tpm1-209ENSMUST00000113690 ClspnQ80YR7 1315 aa21.95■■□□□ 1.1
Tpm1-209ENSMUST00000113690 Top2bQ64511 1612 aa21.94■■□□□ 1.1
Tpm1-209ENSMUST00000113690 Cc2d2aQ8CFW7 1633 aa21.91■■□□□ 1.1
Tpm1-209ENSMUST00000113690 Gm38655A0A286YDK6 273 aa21.89■■□□□ 1.1
Tpm1-209ENSMUST00000113690 BicraF8VPZ9 1578 aa21.85■■□□□ 1.09
Tpm1-209ENSMUST00000113690 Rapgef2Q8CHG7 1496 aa21.85■■□□□ 1.09
Tpm1-209ENSMUST00000113690 TonslQ6NZL6 1363 aa21.82■■□□□ 1.08
Tpm1-209ENSMUST00000113690 Plekhg3Q4VAC9 1341 aa21.8■■□□□ 1.08
Tpm1-209ENSMUST00000113690 Npm2Q80W85 207 aa21.75■■□□□ 1.07
Tpm1-209ENSMUST00000113690 Cep162Q6ZQ06 1403 aa21.74■■□□□ 1.07
Tpm1-209ENSMUST00000113690 Cttnbp2B9EJA2 1648 aa21.73■■□□□ 1.07
Tpm1-209ENSMUST00000113690 Aplp2Q06335 707 aa21.7■■□□□ 1.06
Tpm1-209ENSMUST00000113690 Top2aQ01320 1528 aaKnown RBP21.62■■□□□ 1.05
Tpm1-209ENSMUST00000113690 Clip1Q922J3 1391 aa21.62■■□□□ 1.05
Tpm1-209ENSMUST00000113690 Fmn1Q05860 1466 aa21.61■■□□□ 1.05
Tpm1-209ENSMUST00000113690 CenpbP27790 599 aa21.59■■□□□ 1.05
Tpm1-209ENSMUST00000113690 Eid3Q3V124 375 aa21.55■■□□□ 1.04
Tpm1-209ENSMUST00000113690 Smarca4Q3TKT4 1613 aaKnown RBP21.49■■□□□ 1.03
Tpm1-209ENSMUST00000113690 Ncapd3Q6ZQK0 1506 aa21.48■■□□□ 1.03
Tpm1-209ENSMUST00000113690 Ap3b1Q9Z1T1 1105 aa21.48■■□□□ 1.03
Tpm1-209ENSMUST00000113690 Mapk8ip2Q9ERE9 830 aa21.42■■□□□ 1.02
Tpm1-209ENSMUST00000113690 Hnrnpul2Q00PI9 745 aaKnown RBP21.39■■□□□ 1.01
Tpm1-209ENSMUST00000113690 SafbD3YXK2 937 aaKnown RBP21.38■■□□□ 1.01
Tpm1-209ENSMUST00000113690 Eif4g1Q6NZJ6 1600 aaKnown RBP21.31■■□□□ 1
Tpm1-209ENSMUST00000113690 Il27Q8K3I6 234 aa21.24■□□□□ 0.99
Tpm1-209ENSMUST00000113690 Arap1Q4LDD4 1452 aa21.23■□□□□ 0.99
Tpm1-209ENSMUST00000113690 Myt1Q8CFC2 1127 aa21.22■□□□□ 0.99
Tpm1-209ENSMUST00000113690 Arhgap35Q91YM2 1499 aa21.21■□□□□ 0.99
Tpm1-209ENSMUST00000113690 Fam71e1A1L3C1 212 aa21.21■□□□□ 0.99
Tpm1-209ENSMUST00000113690 PtprkP35822 1457 aa21.2■□□□□ 0.98
Tpm1-209ENSMUST00000113690 Iqgap2Q3UQ44 1575 aa21.19■□□□□ 0.98
Tpm1-209ENSMUST00000113690 Eea1Q8BL66 1411 aa21.17■□□□□ 0.98
Tpm1-209ENSMUST00000113690 Kdm5bQ80Y84 1544 aa21.15■□□□□ 0.98
Tpm1-209ENSMUST00000113690 Setd5Q5XJV7 1441 aa21.14■□□□□ 0.97
Tpm1-209ENSMUST00000113690 Tnnt3Q9QZ47 272 aa21.09■□□□□ 0.97
Tpm1-209ENSMUST00000113690 Fam50aQ9WV03 339 aaKnown RBP21.08■□□□□ 0.96
Tpm1-209ENSMUST00000113690 Arhgef5E9Q7D5 1581 aa21.06■□□□□ 0.96
Tpm1-209ENSMUST00000113690 NclP09405 707 aaKnown RBP21.06■□□□□ 0.96
Tpm1-209ENSMUST00000113690 Rpap1Q80TE0 1409 aa21.02■□□□□ 0.96
Tpm1-209ENSMUST00000113690 Ccdc18Q640L5 1455 aa21.01■□□□□ 0.95
Tpm1-209ENSMUST00000113690 Baz1bQ9Z277 1479 aa21.01■□□□□ 0.95
Tpm1-209ENSMUST00000113690 BlmO88700 1416 aa20.99■□□□□ 0.95
Tpm1-209ENSMUST00000113690 TnnQ80Z71 1560 aa20.99■□□□□ 0.95
Tpm1-209ENSMUST00000113690 Lmod2Q3UHZ5 550 aa20.99■□□□□ 0.95
Tpm1-209ENSMUST00000113690 NrkQ9R0G8 1455 aa20.98■□□□□ 0.95
Tpm1-209ENSMUST00000113690 AqrQ8CFQ3 1481 aaKnown RBP20.96■□□□□ 0.95
Tpm1-209ENSMUST00000113690 Znf710Q3U288 666 aa20.95■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms