RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 PrcdQ00LT2 53 aa6.03□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Defa20Q45VN2 95 aa6.03□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Eif4ebp1Q60876 117 aa6.03□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Csmd1Q923L3 3564 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Gm3250E9Q1M3 230 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Lst1O08843 95 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 SelenowP63300 88 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ube2wQ8VDW4 151 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Igkv4-79A0A075B5L8 119 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Igkv3-9A0A140T8P4 119 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Sigmar1O55242 223 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 P01823 113 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ube2d1P61080 147 aaKnown RBP6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ndufa12Q7TMF3 145 aaKnown RBP6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Atp5g1Q9CR84 136 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Tep1P97499 2629 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ubr5Q80TP3 2792 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Trav4d-3A0A075B625 110 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Gm11565A2A4M7 156 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Spink13Q3UTS8 97 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Defb29Q8BGW9 78 aa6.02□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Muc5acE9QAQ8 3455 aa6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Igkv3-1A0A075B5P1 119 aa6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Gm17472A0A075B683 117 aa6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Spata45Q9CVW4 97 aa6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Tnfrsf23Q9ER63 176 aa6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Smg1Q8BKX6 3658 aaKnown RBP6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Trav4-3A0A0B4J1K1 110 aa6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 P06329 120 aa6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Rbmy1bQ60990 380 aa6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Trav7-6A0A075B640 112 aa6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ighv8-5A0A0A6YY60 119 aa6.01□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ighv1-62-1A0A075B5U3 116 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 B230359F08RikA0A0B4J1K3 109 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 MalO09198 153 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ss18l2Q9D174 77 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 1700010B08RikQ9DAI7 102 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Igkv8-24A0A140T8P5 121 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Gm10322F7D7I4 111 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ube2d3P61079 147 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ube2d2P62838 147 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Chchd7Q8K2Q5 85 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Cd99Q8VCN6 175 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ighv8-12A0A0G2JDE1 119 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ppp1r32Q148A4 427 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Lage3Q9CR70 148 aa6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 FlnbQ80X90 2602 aaKnown RBP6□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Chd6A3KFM7 2711 aa5.99□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Nhlrc1Q8BR37 401 aa5.99□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Higd2aQ9CQJ1 106 aa5.99□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Gm867A0A1W2P7T4 151 aa5.99□□□□□ -1.45
Bdnf-202ENSMUST00000111042 P01745 121 aa5.99□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Pla2g1bQ9Z0Y2 146 aa5.99□□□□□ -1.45
Bdnf-202ENSMUST00000111042 NipblQ6KCD5 2798 aaKnown RBP5.99□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Gm4861Q8C5A4 106 aa5.99□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Tm2d2Q8R0I4 213 aa5.99□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Dmbt1Q60997 2085 aa5.99□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Gm16381A0A1Y7VKT9 73 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Smrp1Q2MH31 260 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Trav11A0A0B4J1J9 114 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Atp5g3P56384 141 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Cdc42se2Q8BGH7 84 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 AI854703Q8BIN3 203 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 3110070M22RikQ9DAQ7 118 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 PtprqP0C5E4 2300 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Zfp951A0A087WRH0 451 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Igkv8-16A0A0G2JDG9 121 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 P01896 185 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Defb45Q3V490 66 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Lgals4Q8K419 326 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 9430069I07RikQ9CX21 111 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Q9DAQ5 155 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Lama5Q61001 3718 aa5.98□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Defa1P11477 93 aa5.97□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Rnf152Q8BG47 203 aa5.97□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Trav13-1A0A075B644 110 aa5.97□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Gm7102J3QQ10 178 aa5.97□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Gm9747Q810H1 104 aa5.97□□□□□ -1.45
Bdnf-202ENSMUST00000111042 PemtQ61907 199 aa5.97□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Gatd1Q8BFQ8 220 aa5.97□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ndufa3Q9CQ91 84 aa5.97□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ly6hQ9WUC3 139 aa5.97□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Trav13-2A0A075B649 110 aa5.96□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Igkv8-34A0A0G2JDU0 121 aa5.96□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Sslp1Q3UN54 99 aa5.96□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Esm1Q9QYY7 184 aa5.96□□□□□ -1.45
Bdnf-202ENSMUST00000111042 Ighv13-2A0A0A6YWN3 119 aa5.96□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Timm17bQ9Z0V7 172 aa5.96□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Hbb-b2P02089 147 aa5.96□□□□□ -1.46
Bdnf-202ENSMUST00000111042 CrygfQ9CXV3 174 aa5.96□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Shisa2Q8QZV2 295 aa5.95□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Gm12057A0A087WR21 115 aa5.95□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Gm26661M0QWV4 156 aa5.95□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Reg3dQ9QUS9 175 aa5.95□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Ighv1-61P01749 117 aa5.95□□□□□ -1.46
Bdnf-202ENSMUST00000111042 AtrQ9JKK8 2635 aa5.95□□□□□ -1.46
Bdnf-202ENSMUST00000111042 D130052B06RikQ3UW13 202 aa5.94□□□□□ -1.46
Bdnf-202ENSMUST00000111042 4930432M17RikQ3V0W9 174 aa5.94□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Ighv1-59A0A0A6YXE0 117 aa5.94□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Igkv4-53A0A0G2JFC6 119 aa5.93□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms