RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 NischQ80TM9 1593 aa15.25■□□□□ 0.03
Bdnf-202ENSMUST00000111042 Rhox8Q6VSS7 320 aa15.23■□□□□ 0.03
Bdnf-202ENSMUST00000111042 Abcc9P70170 1546 aa14.58□□□□□ -0.08
Bdnf-202ENSMUST00000111042 Gm35339A0A140LHH9 1649 aa14.35□□□□□ -0.11
Bdnf-202ENSMUST00000111042 Abcc8B2RUS7 1588 aa14.29□□□□□ -0.12
Bdnf-202ENSMUST00000111042 Ccdc136Q3TVA9 1136 aa13.94□□□□□ -0.18
Bdnf-202ENSMUST00000111042 Rtl1Q7M732 1744 aa13.81□□□□□ -0.2
Bdnf-202ENSMUST00000111042 Ccdc180J3QNE4 1664 aa13.75□□□□□ -0.21
Bdnf-202ENSMUST00000111042 Ehmt2Q9Z148 1263 aaKnown RBP13.67□□□□□ -0.22
Bdnf-202ENSMUST00000111042 Trim41Q5NCC3 630 aa13.55□□□□□ -0.24
Bdnf-202ENSMUST00000111042 Rpgrip1Q9EPQ2 1331 aa13.52□□□□□ -0.25
Bdnf-202ENSMUST00000111042 Cngb1E1AZ71 1325 aa13.46□□□□□ -0.26
Bdnf-202ENSMUST00000111042 Zcchc6Q5BLK4 1491 aaKnown RBP13.41□□□□□ -0.26
Bdnf-202ENSMUST00000111042 HrcG5E8J6 738 aa13.4□□□□□ -0.26
Bdnf-202ENSMUST00000111042 Rb1cc1Q9ESK9 1588 aa13.37□□□□□ -0.27
Bdnf-202ENSMUST00000111042 Esf1Q3V1V3 845 aaKnown RBP13.35□□□□□ -0.27
Bdnf-202ENSMUST00000111042 Gab3Q8BSM5 595 aa13.33□□□□□ -0.28
Bdnf-202ENSMUST00000111042 Dcaf1Q80TR8 1506 aa13.21□□□□□ -0.3
Bdnf-202ENSMUST00000111042 Acin1Q9JIX8 1338 aaKnown RBP13.19□□□□□ -0.3
Bdnf-202ENSMUST00000111042 NacadQ5SWP3 1504 aa13.16□□□□□ -0.3
Bdnf-202ENSMUST00000111042 Kdm5dQ62240 1548 aa13.16□□□□□ -0.3
Bdnf-202ENSMUST00000111042 Baz1aO88379 1555 aa13.14□□□□□ -0.31
Bdnf-202ENSMUST00000111042 ScribQ80U72 1612 aa13.14□□□□□ -0.31
Bdnf-202ENSMUST00000111042 Mapk8ip2Q9ERE9 830 aa12.96□□□□□ -0.33
Bdnf-202ENSMUST00000111042 Myt1lP97500 1187 aa12.93□□□□□ -0.34
Bdnf-202ENSMUST00000111042 Npm2Q80W85 207 aa12.91□□□□□ -0.34
Bdnf-202ENSMUST00000111042 Brd4Q9ESU6 1400 aaKnown RBP12.88□□□□□ -0.35
Bdnf-202ENSMUST00000111042 Chic1Q8CBW7 227 aa12.88□□□□□ -0.35
Bdnf-202ENSMUST00000111042 Cep164Q5DU05 1446 aa12.86□□□□□ -0.35
Bdnf-202ENSMUST00000111042 Zeb1Q64318 1117 aa12.85□□□□□ -0.35
Bdnf-202ENSMUST00000111042 UbtfP25976 765 aaKnown RBP12.77□□□□□ -0.36
Bdnf-202ENSMUST00000111042 Sycp2Q9CUU3 1500 aa12.77□□□□□ -0.37
Bdnf-202ENSMUST00000111042 Crybg2B7ZCC2 1516 aa12.74□□□□□ -0.37
Bdnf-202ENSMUST00000111042 Il27Q8K3I6 234 aa12.71□□□□□ -0.38
Bdnf-202ENSMUST00000111042 Smarca2Q6DIC0 1577 aa12.71□□□□□ -0.38
Bdnf-202ENSMUST00000111042 NefmP08553 848 aa12.69□□□□□ -0.38
Bdnf-202ENSMUST00000111042 Pcgf6Q99NA9 353 aa12.67□□□□□ -0.38
Bdnf-202ENSMUST00000111042 Wdr66E9Q743 1299 aa12.66□□□□□ -0.38
Bdnf-202ENSMUST00000111042 Las1lA2BE28 776 aaKnown RBP12.66□□□□□ -0.38
Bdnf-202ENSMUST00000111042 Golga3P55937 1487 aa12.65□□□□□ -0.38
Bdnf-202ENSMUST00000111042 Rsf1E9PWW9 1441 aaKnown RBP12.65□□□□□ -0.38
Bdnf-202ENSMUST00000111042 Cecr2E9Q2Z1 1453 aa12.62□□□□□ -0.39
Bdnf-202ENSMUST00000111042 Mier1Q5UAK0 511 aa12.6□□□□□ -0.39
Bdnf-202ENSMUST00000111042 Ccdc88bQ4QRL3 1481 aa12.55□□□□□ -0.4
Bdnf-202ENSMUST00000111042 Supt5hO55201 1082 aaKnown RBP12.54□□□□□ -0.4
Bdnf-202ENSMUST00000111042 Ap3b1Q9Z1T1 1105 aa12.49□□□□□ -0.41
Bdnf-202ENSMUST00000111042 Synj1Q8CHC4 1574 aa12.46□□□□□ -0.41
Bdnf-202ENSMUST00000111042 CftrP26361 1476 aa12.46□□□□□ -0.41
Bdnf-202ENSMUST00000111042 Plekhg3Q4VAC9 1341 aa12.43□□□□□ -0.42
Bdnf-202ENSMUST00000111042 Ube2uB1AUC4 352 aa12.39□□□□□ -0.43
Bdnf-202ENSMUST00000111042 Clip1Q922J3 1391 aa12.35□□□□□ -0.43
Bdnf-202ENSMUST00000111042 Ppargc1bQ8VHJ7 1014 aa12.33□□□□□ -0.44
Bdnf-202ENSMUST00000111042 Npm1Q61937 292 aaKnown RBP12.32□□□□□ -0.44
Bdnf-202ENSMUST00000111042 BicraF8VPZ9 1578 aa12.3□□□□□ -0.44
Bdnf-202ENSMUST00000111042 Smarca4Q3TKT4 1613 aaKnown RBP12.29□□□□□ -0.44
Bdnf-202ENSMUST00000111042 Fmn1Q05860 1466 aa12.27□□□□□ -0.44
Bdnf-202ENSMUST00000111042 Fam50aQ9WV03 339 aaKnown RBP12.27□□□□□ -0.44
Bdnf-202ENSMUST00000111042 Cttnbp2B9EJA2 1648 aa12.27□□□□□ -0.45
Bdnf-202ENSMUST00000111042 TonslQ6NZL6 1363 aa12.26□□□□□ -0.45
Bdnf-202ENSMUST00000111042 Kif15Q6P9L6 1387 aa12.24□□□□□ -0.45
Bdnf-202ENSMUST00000111042 Lmod2Q3UHZ5 550 aa12.24□□□□□ -0.45
Bdnf-202ENSMUST00000111042 Pds5bQ4VA53 1446 aaKnown RBP12.23□□□□□ -0.45
Bdnf-202ENSMUST00000111042 Sall2Q9QX96 1004 aa12.23□□□□□ -0.45
Bdnf-202ENSMUST00000111042 Ubl4bQ9CQ84 188 aa12.22□□□□□ -0.45
Bdnf-202ENSMUST00000111042 Cep162Q6ZQ06 1403 aa12.2□□□□□ -0.46
Bdnf-202ENSMUST00000111042 Atad2bE9Q166 1460 aaKnown RBP12.18□□□□□ -0.46
Bdnf-202ENSMUST00000111042 Ercc6F8VPZ5 1481 aa12.16□□□□□ -0.46
Bdnf-202ENSMUST00000111042 Eid3Q3V124 375 aa12.15□□□□□ -0.46
Bdnf-202ENSMUST00000111042 Cdk11bP24788 784 aaKnown RBP12.15□□□□□ -0.47
Bdnf-202ENSMUST00000111042 Iqgap2Q3UQ44 1575 aa12.14□□□□□ -0.47
Bdnf-202ENSMUST00000111042 Setd5Q5XJV7 1441 aa12.13□□□□□ -0.47
Bdnf-202ENSMUST00000111042 Nop58Q6DFW4 536 aaKnown RBP12.13□□□□□ -0.47
Bdnf-202ENSMUST00000111042 Rapgef2Q8CHG7 1496 aa12.12□□□□□ -0.47
Bdnf-202ENSMUST00000111042 Cc2d2aQ8CFW7 1633 aa12.12□□□□□ -0.47
Bdnf-202ENSMUST00000111042 ClspnQ80YR7 1315 aa12.1□□□□□ -0.47
Bdnf-202ENSMUST00000111042 Neurod1Q60867 357 aa12.08□□□□□ -0.47
Bdnf-202ENSMUST00000111042 NclP09405 707 aaKnown RBP12.08□□□□□ -0.48
Bdnf-202ENSMUST00000111042 Eea1Q8BL66 1411 aa12.07□□□□□ -0.48
Bdnf-202ENSMUST00000111042 Top2bQ64511 1612 aa12.06□□□□□ -0.48
Bdnf-202ENSMUST00000111042 Ccdc18Q640L5 1455 aa12.06□□□□□ -0.48
Bdnf-202ENSMUST00000111042 BlmO88700 1416 aa12.06□□□□□ -0.48
Bdnf-202ENSMUST00000111042 Aebp2Q9Z248 504 aaKnown RBP12.05□□□□□ -0.48
Bdnf-202ENSMUST00000111042 Top2aQ01320 1528 aaKnown RBP12.01□□□□□ -0.49
Bdnf-202ENSMUST00000111042 Slc24a1Q91WD8 1130 aa11.94□□□□□ -0.5
Bdnf-202ENSMUST00000111042 Cux2P70298 1426 aa11.92□□□□□ -0.5
Bdnf-202ENSMUST00000111042 Frmpd1A2AKB4 1549 aa11.9□□□□□ -0.5
Bdnf-202ENSMUST00000111042 Phldb1Q6PDH0 1371 aaKnown RBP11.9□□□□□ -0.5
Bdnf-202ENSMUST00000111042 Chic2Q9D9G3 165 aa11.89□□□□□ -0.51
Bdnf-202ENSMUST00000111042 Baz1bQ9Z277 1479 aa11.89□□□□□ -0.51
Bdnf-202ENSMUST00000111042 Stra8P70278 393 aa11.87□□□□□ -0.51
Bdnf-202ENSMUST00000111042 Anks4bQ8K3X6 423 aa11.85□□□□□ -0.51
Bdnf-202ENSMUST00000111042 PtprkP35822 1457 aa11.84□□□□□ -0.51
Bdnf-202ENSMUST00000111042 Ccer2J3QPU5 274 aa11.84□□□□□ -0.51
Bdnf-202ENSMUST00000111042 Arhgap35Q91YM2 1499 aa11.84□□□□□ -0.51
Bdnf-202ENSMUST00000111042 CenpbP27790 599 aa11.81□□□□□ -0.52
Bdnf-202ENSMUST00000111042 Shroom4Q1W617 1475 aa11.81□□□□□ -0.52
Bdnf-202ENSMUST00000111042 Wdr62Q3U3T8 1523 aa11.8□□□□□ -0.52
Bdnf-202ENSMUST00000111042 LrpprcQ6PB66 1392 aaKnown RBP11.8□□□□□ -0.52
Bdnf-202ENSMUST00000111042 Aebp1Q640N1 1128 aa11.79□□□□□ -0.52
Bdnf-202ENSMUST00000111042 Fkbp15Q6P9Q6 1216 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms