RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Igkv4-68A0A0B4J1I7 117 aa10.7□□□□□ -0.7
Rtf1-201ENSMUST00000028767 E130218I03RikA0A0U1RNU5 63 aa10.7□□□□□ -0.7
Rtf1-201ENSMUST00000028767 P01896 185 aa10.7□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Ndufa3Q9CQ91 84 aa10.7□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Zzef1Q5SSH7 2924 aa10.69□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Lage3Q9CR70 148 aa10.69□□□□□ -0.7
Rtf1-201ENSMUST00000028767 SbsponQ3UPR9 264 aa10.69□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Vps13cQ8BX70 3748 aa10.69□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Trav13-1A0A075B644 110 aa10.69□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Ighv13-2A0A0A6YWN3 119 aa10.69□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Gm9767G3X930 207 aa10.69□□□□□ -0.7
Rtf1-201ENSMUST00000028767 P01823 113 aa10.68□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Fxyd5P97808 178 aa10.68□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Reg3dQ9QUS9 175 aa10.68□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Defb42Q8BVB5 75 aa10.68□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Cdk2ap2Q9CPY4 127 aa10.68□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Gm5464Q3UY29 175 aa10.68□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Trav13-2A0A075B649 110 aa10.67□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Ss18l2Q9D174 77 aa10.67□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Q9DAQ5 155 aa10.67□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Znf580Q9DB38 172 aa10.67□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Higd2aQ9CQJ1 106 aa10.67□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Trav4d-3A0A075B625 110 aa10.67□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Gm12057A0A087WR21 115 aa10.66□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Zfp951A0A087WRH0 451 aa10.66□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Usp9yF8VPU6 2556 aa10.66□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Igkv4-79A0A075B5L8 119 aa10.66□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Spink13Q3UTS8 97 aa10.66□□□□□ -0.7
Rtf1-201ENSMUST00000028767 1700010B08RikQ9DAI7 102 aa10.66□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Igkv8-34A0A0G2JDU0 121 aa10.66□□□□□ -0.7
Rtf1-201ENSMUST00000028767 PemtQ61907 199 aa10.66□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Lgals4Q8K419 326 aa10.66□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Krtap27-1E9PX37 202 aa10.65□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Defa2P28309 93 aa10.65□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Bri3P28662 125 aa10.65□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Srsf12Q8C8K3 266 aa10.65□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Igkv6-13A0A0G2JGY3 119 aa10.65□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Gm9922Q8C3P1 144 aa10.65□□□□□ -0.7
Rtf1-201ENSMUST00000028767 Tm2d2Q8R0I4 213 aa10.65□□□□□ -0.7
Rtf1-201ENSMUST00000028767 FlnbQ80X90 2602 aaKnown RBP10.65□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Gm3250E9Q1M3 230 aa10.64□□□□□ -0.71
Rtf1-201ENSMUST00000028767 PtprqP0C5E4 2300 aa10.64□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Trav4-3A0A0B4J1K1 110 aa10.64□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Trav13n-2A0A0G2JF93 110 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Igkv1-35A0A0G2JDE5 120 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Atp5g3P56384 141 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Ighv1-62-1A0A075B5U3 116 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Trav3-4A0A075B654 114 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Ighv8-5A0A0A6YY60 119 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Trav11A0A0B4J1J9 114 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Ighv8-12A0A0G2JDE1 119 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Ube2d1P61080 147 aaKnown RBP10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Cd164l2Q9D6W7 172 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 AngP21570 145 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 BC025920Q3US60 128 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Ly6hQ9WUC3 139 aa10.63□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Cfc1P97766 202 aa10.62□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Muc2Q80Z19 2680 aa10.61□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Eif4ebp1Q60876 117 aa10.61□□□□□ -0.71
Rtf1-201ENSMUST00000028767 PolqQ8CGS6 2544 aa10.61□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Ighv1-5A0A0A6YWG2 117 aa10.61□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Ppp1r32Q148A4 427 aa10.61□□□□□ -0.71
Rtf1-201ENSMUST00000028767 P01745 121 aa10.6□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Hist1h4aP62806 103 aaKnown RBP10.6□□□□□ -0.71
Rtf1-201ENSMUST00000028767 2310009B15RikA0A0A6YWI4 143 aa10.6□□□□□ -0.71
Rtf1-201ENSMUST00000028767 9430069I07RikQ9CX21 111 aa10.6□□□□□ -0.71
Rtf1-201ENSMUST00000028767 SpenQ62504 3644 aaKnown RBP10.6□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Igkv4-53A0A0G2JFC6 119 aa10.59□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Xcl1P47993 114 aa10.59□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Pla2g1bQ9Z0Y2 146 aa10.59□□□□□ -0.71
Rtf1-201ENSMUST00000028767 Usp24B1AY13 2617 aaKnown RBP10.58□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Gm10518F6UQQ9 182 aa10.58□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Ube2d3P61079 147 aa10.58□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Ube2d2P62838 147 aa10.58□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Gm17472A0A075B683 117 aa10.58□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Trank1Q8BV79 2999 aa10.58□□□□□ -0.72
Rtf1-201ENSMUST00000028767 2010109I03RikQ9CQ11 111 aa10.58□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Smim26Q3V460 107 aa10.57□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Lamtor3O88653 124 aa10.57□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Defa7P50705 93 aa10.57□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Cdc42se2Q8BGH7 84 aa10.57□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Esm1Q9QYY7 184 aa10.56□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Itpr3P70227 2670 aa10.56□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Gm10322F7D7I4 111 aa10.56□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Cryba4Q9JJV0 196 aa10.56□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Trav9n-4A0A075B631 113 aa10.55□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Defa25Q5G864 92 aa10.55□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Igkv4-61A0A0G2JH00 117 aa10.55□□□□□ -0.72
Rtf1-201ENSMUST00000028767 P01755 137 aa10.55□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Chchd7Q8K2Q5 85 aa10.55□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Klk12B2RVZ0 247 aa10.54□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Igkv3-2A0A075B5P0 119 aa10.54□□□□□ -0.72
Rtf1-201ENSMUST00000028767 MplkipQ9D011 178 aa10.54□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Smrp1Q2MH31 260 aa10.54□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Shisa2Q8QZV2 295 aa10.53□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Krtap26-1Q9D7N2 215 aa10.53□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Crip2Q9DCT8 208 aaKnown RBP10.53□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Timm17bQ9Z0V7 172 aa10.53□□□□□ -0.72
Rtf1-201ENSMUST00000028767 1700011M02RikB1AX35 88 aa10.52□□□□□ -0.72
Rtf1-201ENSMUST00000028767 Igkv2-109A0A075B5K6 120 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms