RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Rhox8Q6VSS7 320 aa26.78■■□□□ 1.88
Rtf1-201ENSMUST00000028767 NischQ80TM9 1593 aa26■■□□□ 1.75
Rtf1-201ENSMUST00000028767 Abcc9P70170 1546 aa24.73■■□□□ 1.55
Rtf1-201ENSMUST00000028767 Ccdc136Q3TVA9 1136 aa24.43■■□□□ 1.5
Rtf1-201ENSMUST00000028767 Ehmt2Q9Z148 1263 aaKnown RBP24.28■■□□□ 1.48
Rtf1-201ENSMUST00000028767 Abcc8B2RUS7 1588 aa24.23■■□□□ 1.47
Rtf1-201ENSMUST00000028767 Gm35339A0A140LHH9 1649 aa23.99■■□□□ 1.43
Rtf1-201ENSMUST00000028767 Rpgrip1Q9EPQ2 1331 aa23.81■■□□□ 1.4
Rtf1-201ENSMUST00000028767 Ccdc180J3QNE4 1664 aa23.67■■□□□ 1.38
Rtf1-201ENSMUST00000028767 Trim41Q5NCC3 630 aa23.65■■□□□ 1.38
Rtf1-201ENSMUST00000028767 Cngb1E1AZ71 1325 aa23.63■■□□□ 1.37
Rtf1-201ENSMUST00000028767 Rtl1Q7M732 1744 aa23.61■■□□□ 1.37
Rtf1-201ENSMUST00000028767 Gab3Q8BSM5 595 aa23.48■■□□□ 1.35
Rtf1-201ENSMUST00000028767 Esf1Q3V1V3 845 aaKnown RBP23.42■■□□□ 1.34
Rtf1-201ENSMUST00000028767 HrcG5E8J6 738 aa23.23■■□□□ 1.31
Rtf1-201ENSMUST00000028767 Zcchc6Q5BLK4 1491 aaKnown RBP23.2■■□□□ 1.3
Rtf1-201ENSMUST00000028767 Acin1Q9JIX8 1338 aaKnown RBP23.15■■□□□ 1.3
Rtf1-201ENSMUST00000028767 Zeb1Q64318 1117 aa22.84■■□□□ 1.25
Rtf1-201ENSMUST00000028767 Rb1cc1Q9ESK9 1588 aa22.82■■□□□ 1.24
Rtf1-201ENSMUST00000028767 Myt1lP97500 1187 aa22.79■■□□□ 1.24
Rtf1-201ENSMUST00000028767 Npm2Q80W85 207 aa22.72■■□□□ 1.23
Rtf1-201ENSMUST00000028767 Dcaf1Q80TR8 1506 aa22.62■■□□□ 1.21
Rtf1-201ENSMUST00000028767 Wdr66E9Q743 1299 aa22.55■■□□□ 1.2
Rtf1-201ENSMUST00000028767 UbtfP25976 765 aaKnown RBP22.52■■□□□ 1.2
Rtf1-201ENSMUST00000028767 Las1lA2BE28 776 aaKnown RBP22.43■■□□□ 1.18
Rtf1-201ENSMUST00000028767 NacadQ5SWP3 1504 aa22.37■■□□□ 1.17
Rtf1-201ENSMUST00000028767 Baz1aO88379 1555 aa22.37■■□□□ 1.17
Rtf1-201ENSMUST00000028767 Pcgf6Q99NA9 353 aa22.36■■□□□ 1.17
Rtf1-201ENSMUST00000028767 Chic1Q8CBW7 227 aa22.36■■□□□ 1.17
Rtf1-201ENSMUST00000028767 Kdm5dQ62240 1548 aa22.34■■□□□ 1.17
Rtf1-201ENSMUST00000028767 Il27Q8K3I6 234 aa22.3■■□□□ 1.16
Rtf1-201ENSMUST00000028767 NefmP08553 848 aa22.28■■□□□ 1.16
Rtf1-201ENSMUST00000028767 Cep164Q5DU05 1446 aa22.19■■□□□ 1.14
Rtf1-201ENSMUST00000028767 Brd4Q9ESU6 1400 aaKnown RBP22.16■■□□□ 1.14
Rtf1-201ENSMUST00000028767 ScribQ80U72 1612 aa22.12■■□□□ 1.13
Rtf1-201ENSMUST00000028767 Supt5hO55201 1082 aaKnown RBP22.12■■□□□ 1.13
Rtf1-201ENSMUST00000028767 Mier1Q5UAK0 511 aa22.08■■□□□ 1.12
Rtf1-201ENSMUST00000028767 Ube2uB1AUC4 352 aa22.02■■□□□ 1.12
Rtf1-201ENSMUST00000028767 Ap3b1Q9Z1T1 1105 aa21.99■■□□□ 1.11
Rtf1-201ENSMUST00000028767 Ppargc1bQ8VHJ7 1014 aa21.9■■□□□ 1.1
Rtf1-201ENSMUST00000028767 Rsf1E9PWW9 1441 aaKnown RBP21.8■■□□□ 1.08
Rtf1-201ENSMUST00000028767 Plekhg3Q4VAC9 1341 aa21.79■■□□□ 1.08
Rtf1-201ENSMUST00000028767 Golga3P55937 1487 aa21.73■■□□□ 1.07
Rtf1-201ENSMUST00000028767 Sycp2Q9CUU3 1500 aa21.64■■□□□ 1.06
Rtf1-201ENSMUST00000028767 Fam50aQ9WV03 339 aaKnown RBP21.64■■□□□ 1.05
Rtf1-201ENSMUST00000028767 Ccdc88bQ4QRL3 1481 aa21.59■■□□□ 1.05
Rtf1-201ENSMUST00000028767 Smarca2Q6DIC0 1577 aa21.56■■□□□ 1.04
Rtf1-201ENSMUST00000028767 TonslQ6NZL6 1363 aa21.55■■□□□ 1.04
Rtf1-201ENSMUST00000028767 Cecr2E9Q2Z1 1453 aa21.54■■□□□ 1.04
Rtf1-201ENSMUST00000028767 Crybg2B7ZCC2 1516 aa21.52■■□□□ 1.03
Rtf1-201ENSMUST00000028767 Cdk11bP24788 784 aaKnown RBP21.5■■□□□ 1.03
Rtf1-201ENSMUST00000028767 Clip1Q922J3 1391 aa21.5■■□□□ 1.03
Rtf1-201ENSMUST00000028767 Lmod2Q3UHZ5 550 aa21.49■■□□□ 1.03
Rtf1-201ENSMUST00000028767 Sall2Q9QX96 1004 aa21.49■■□□□ 1.03
Rtf1-201ENSMUST00000028767 Nop58Q6DFW4 536 aaKnown RBP21.45■■□□□ 1.02
Rtf1-201ENSMUST00000028767 Npm1Q61937 292 aaKnown RBP21.44■■□□□ 1.02
Rtf1-201ENSMUST00000028767 Eid3Q3V124 375 aa21.39■■□□□ 1.02
Rtf1-201ENSMUST00000028767 NclP09405 707 aaKnown RBP21.33■■□□□ 1.01
Rtf1-201ENSMUST00000028767 Neurod1Q60867 357 aa21.33■■□□□ 1.01
Rtf1-201ENSMUST00000028767 Slc24a1Q91WD8 1130 aa21.31■■□□□ 1
Rtf1-201ENSMUST00000028767 CftrP26361 1476 aa21.28■■□□□ 1
Rtf1-201ENSMUST00000028767 Synj1Q8CHC4 1574 aa21.26■□□□□ 0.99
Rtf1-201ENSMUST00000028767 ClspnQ80YR7 1315 aa21.24■□□□□ 0.99
Rtf1-201ENSMUST00000028767 Ubl4bQ9CQ84 188 aa21.17■□□□□ 0.98
Rtf1-201ENSMUST00000028767 Mapk8ip2Q9ERE9 830 aa21.15■□□□□ 0.98
Rtf1-201ENSMUST00000028767 Kif15Q6P9L6 1387 aa21.14■□□□□ 0.97
Rtf1-201ENSMUST00000028767 Aebp2Q9Z248 504 aaKnown RBP21.13■□□□□ 0.97
Rtf1-201ENSMUST00000028767 CenpbP27790 599 aa21.08■□□□□ 0.97
Rtf1-201ENSMUST00000028767 Setd5Q5XJV7 1441 aa21.07■□□□□ 0.96
Rtf1-201ENSMUST00000028767 Fmn1Q05860 1466 aa21.03■□□□□ 0.96
Rtf1-201ENSMUST00000028767 Stra8P70278 393 aa21.02■□□□□ 0.96
Rtf1-201ENSMUST00000028767 Cep162Q6ZQ06 1403 aa21.02■□□□□ 0.96
Rtf1-201ENSMUST00000028767 BlmO88700 1416 aa21.01■□□□□ 0.95
Rtf1-201ENSMUST00000028767 Eea1Q8BL66 1411 aa20.9■□□□□ 0.94
Rtf1-201ENSMUST00000028767 Smarca4Q3TKT4 1613 aaKnown RBP20.89■□□□□ 0.93
Rtf1-201ENSMUST00000028767 Rapgef2Q8CHG7 1496 aa20.88■□□□□ 0.93
Rtf1-201ENSMUST00000028767 Pds5bQ4VA53 1446 aaKnown RBP20.88■□□□□ 0.93
Rtf1-201ENSMUST00000028767 Ercc6F8VPZ5 1481 aa20.86■□□□□ 0.93
Rtf1-201ENSMUST00000028767 Cttnbp2B9EJA2 1648 aa20.85■□□□□ 0.93
Rtf1-201ENSMUST00000028767 Csrnp3P59055 597 aa20.85■□□□□ 0.93
Rtf1-201ENSMUST00000028767 Chic2Q9D9G3 165 aa20.85■□□□□ 0.93
Rtf1-201ENSMUST00000028767 Anks4bQ8K3X6 423 aa20.83■□□□□ 0.93
Rtf1-201ENSMUST00000028767 Zbtb7cQ8VCZ7 619 aa20.82■□□□□ 0.92
Rtf1-201ENSMUST00000028767 Gm38655A0A286YDK6 273 aa20.81■□□□□ 0.92
Rtf1-201ENSMUST00000028767 Ccdc18Q640L5 1455 aa20.79■□□□□ 0.92
Rtf1-201ENSMUST00000028767 Eif5bQ05D44 1216 aaKnown RBP20.78■□□□□ 0.92
Rtf1-201ENSMUST00000028767 Tnnt3Q9QZ47 272 aa20.77■□□□□ 0.92
Rtf1-201ENSMUST00000028767 Atad2bE9Q166 1460 aaKnown RBP20.74■□□□□ 0.91
Rtf1-201ENSMUST00000028767 BicraF8VPZ9 1578 aa20.74■□□□□ 0.91
Rtf1-201ENSMUST00000028767 NrdcQ8BHG1 1161 aa20.73■□□□□ 0.91
Rtf1-201ENSMUST00000028767 Fkbp15Q6P9Q6 1216 aaKnown RBP20.71■□□□□ 0.91
Rtf1-201ENSMUST00000028767 Cc2d2aQ8CFW7 1633 aa20.68■□□□□ 0.9
Rtf1-201ENSMUST00000028767 Iqgap2Q3UQ44 1575 aa20.65■□□□□ 0.9
Rtf1-201ENSMUST00000028767 Ccer2J3QPU5 274 aa20.62■□□□□ 0.89
Rtf1-201ENSMUST00000028767 Pelp1Q9DBD5 1123 aaKnown RBP20.6■□□□□ 0.89
Rtf1-201ENSMUST00000028767 Zbtb4Q5F293 982 aa20.59■□□□□ 0.89
Rtf1-201ENSMUST00000028767 Ifnlr1Q8CGK5 535 aa20.54■□□□□ 0.88
Rtf1-201ENSMUST00000028767 Hnrnpul2Q00PI9 745 aaKnown RBP20.53■□□□□ 0.88
Rtf1-201ENSMUST00000028767 Cux2P70298 1426 aa20.5■□□□□ 0.87
Rtf1-201ENSMUST00000028767 Baz1bQ9Z277 1479 aa20.5■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 7.2 ms