RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Col7a1Q63870 2944 aa17.34■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Pdzd2E9Q1M1 2796 aa17.33■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Cd164l2Q9D6W7 172 aa17.33■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Nf1Q04690 2841 aa17.33■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Trdv5A0A075B661 115 aa17.33■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Defa3P28310 93 aa17.33■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Defa10P50708 93 aa17.33■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Defa15P50713 93 aa17.33■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Cd99Q8VCN6 175 aa17.33■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Mfap4Q9D1H9 257 aa17.33■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Ighv8-12A0A0G2JDE1 119 aa17.32■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Igkv4-78A0A0A6YYE5 119 aa17.32■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Ube2d3P61079 147 aa17.32■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Ube2d2P62838 147 aa17.32■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Unc79Q0KK59 2596 aa17.31■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Gm35549A0A0N4SUS7 141 aa17.31■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Tmem238A9JSM3 176 aa17.31■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Gm933J3QPC1 141 aa17.31■□□□□ 0.36
Ubp1-203ENSMUST00000116492 PrlhG3UWC3 86 aa17.3■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Lect2O88803 151 aa17.3■□□□□ 0.36
Ubp1-203ENSMUST00000116492 P01811 117 aa17.3■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Gm9747Q810H1 104 aa17.3■□□□□ 0.36
Ubp1-203ENSMUST00000116492 C920008G01RikA0A0B4J1N1 112 aa17.3■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Gm21748Q3UE70 102 aa17.29■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Lyrm9Q3UN90 78 aa17.29■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Defa24Q5G865 93 aa17.29■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Morn3Q8C5T4 241 aa17.29■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Klk5Q9D140 293 aa17.29■□□□□ 0.36
Ubp1-203ENSMUST00000116492 FlnaQ8BTM8 2647 aaKnown RBP17.29■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Tcf24V9GWT9 166 aa17.29■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Sap30O88574 220 aa17.27■□□□□ 0.36
Ubp1-203ENSMUST00000116492 NrepQ07475 68 aa17.27■□□□□ 0.36
Ubp1-203ENSMUST00000116492 Rif1Q6PR54 2419 aaKnown RBP17.26■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Gm6793B2RXM2 351 aa17.26■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Il19Q8CJ70 176 aa17.26■□□□□ 0.35
Ubp1-203ENSMUST00000116492 CubnQ9JLB4 3623 aa17.26■□□□□ 0.35
Ubp1-203ENSMUST00000116492 CckP09240 115 aa17.25■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Ifitm10Q8BR26 201 aa17.25■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Cfc1P97766 202 aa17.24■□□□□ 0.35
Ubp1-203ENSMUST00000116492 4930442H23RikQ9D5G7 103 aa17.24■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Rpl36aP83882 106 aaKnown RBP17.24■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Gm7849D3YX03 116 aa17.23■□□□□ 0.35
Ubp1-203ENSMUST00000116492 P84751 237 aa17.23■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Gm10300Q8C8P7 189 aa17.23■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Chchd7Q8K2Q5 85 aa17.23■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Morn5Q9DAI9 170 aa17.23■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Rbmy1bQ60990 380 aa17.23■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Il1f10Q8R459 152 aa17.23■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Hrct1Q9D6B9 109 aa17.23■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Mast4Q811L6 2618 aa17.22■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Gm9887F6RFI0 207 aa17.22■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Erdr1J3QMM0 206 aa17.21■□□□□ 0.35
Ubp1-203ENSMUST00000116492 Trav4-3A0A0B4J1K1 110 aa17.2■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Prelid3aQ8VE85 172 aa17.2■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Nop10Q9CQS2 64 aa17.2■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Rab37Q9JKM7 223 aa17.2■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Gm45785A0A1B0GT05 94 aa17.18■□□□□ 0.34
Ubp1-203ENSMUST00000116492 NpwA0A1L1STR8 176 aa17.18■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Ly6gP35461 111 aa17.18■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Tenm3Q9WTS6 2715 aa17.18■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Rpl13aP19253 203 aaKnown RBP17.17■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Xirp2Q4U4S6 3784 aa17.16■□□□□ 0.34
Ubp1-203ENSMUST00000116492 H1fxQ80ZM5 188 aa17.16■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Gm9936Q8C864 160 aa17.16■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Rpl35aO55142 110 aa17.15■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Atp6v0e2Q91XE7 81 aa17.15■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Gm9767G3X930 207 aa17.15■□□□□ 0.34
Ubp1-203ENSMUST00000116492 Trav4d-3A0A075B625 110 aa17.14■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Rpl32-psP17932 135 aa17.14■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Rmi2Q3UPE3 149 aa17.14■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Timm17bQ9Z0V7 172 aa17.14■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Tmem101Q91VP7 257 aa17.13■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Dmbt1Q60997 2085 aa17.12■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Gm20730A0A075B5J6 119 aa17.12■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Trav13d-1A0A075B606 110 aa17.12■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Fgf23Q9EPC2 251 aa17.11■□□□□ 0.33
Ubp1-203ENSMUST00000116492 TrrapQ80YV3 2565 aaKnown RBP17.11■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Chd9Q8BYH8 2885 aa17.11■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Ly6c2P0CW03 131 aa17.11■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Igkv4-79A0A075B5L8 119 aa17.1■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Gm12057A0A087WR21 115 aa17.09■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Notch3Q61982 2318 aa17.09■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Cox8cA6H666 72 aa17.09■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Gm9513B3GLJ6 99 aa17.09■□□□□ 0.33
Ubp1-203ENSMUST00000116492 P01729 129 aa17.09■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Cdc42se2Q8BGH7 84 aa17.09■□□□□ 0.33
Ubp1-203ENSMUST00000116492 GfyJ3KML8 504 aa17.08■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Plac8l1Q08EJ0 177 aa17.08■□□□□ 0.33
Ubp1-203ENSMUST00000116492 Myo9aQ8C170 2542 aa17.08■□□□□ 0.33
Ubp1-203ENSMUST00000116492 CrygaP04345 174 aa17.08■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Pcp4P63054 62 aa17.08■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Tnfrsf23Q9ER63 176 aa17.08■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Shisa2Q8QZV2 295 aa17.07■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Gm10542F6XDR3 90 aa17.06■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Sigmar1O55242 223 aa17.06■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Gpha2Q925Q5 128 aa17.06■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Hivep2Q3UHF7 2430 aa17.06■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Ighv1-61P01749 117 aa17.05■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Crlf1Q9JM58 425 aa17.05■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Trav9d-3A0A075B695 113 aa17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 101.6 ms