RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 SpenQ62504 3644 aaKnown RBP6.14□□□□□ -1.43
Bdnf-202ENSMUST00000111042 FlnaQ8BTM8 2647 aaKnown RBP6.13□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Itpr3P70227 2670 aa6.13□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Gm6793B2RXM2 351 aa6.13□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Rpl32P62911 135 aaKnown RBP6.13□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Runx1Q03347 451 aa6.13□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Usp24B1AY13 2617 aaKnown RBP6.13□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Gm884A2A9H6 3643 aa6.13□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Bri3P28662 125 aa6.13□□□□□ -1.43
Bdnf-202ENSMUST00000111042 1700020N15RikL7MTX3 112 aa6.13□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Cox7a1P56392 80 aa6.13□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Gm3443F7CCV5 94 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Rpl32-psP17932 135 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Srsf12Q8C8K3 266 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 4930415O20RikQ8CDT5 131 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Gm14137Q8CE97 175 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Tcf24V9GWT9 166 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Muc2Q80Z19 2680 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 B230217C12RikE9Q3Z1 139 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Gm10542F6XDR3 90 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Fam240bJ3QMB3 78 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Cfap126Q6P8X9 189 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Q8R092 253 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Q9D8Q6 235 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Dnal4Q9DCM4 105 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Ighv1-11A0A0A6YWI9 117 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Znhit3Q9CQK1 151 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Crlf1Q9JM58 425 aa6.12□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Smim1P0C8K7 78 aa6.11□□□□□ -1.43
Bdnf-202ENSMUST00000111042 BC048562Q80ZQ7 204 aa6.11□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Hrct1Q9D6B9 109 aa6.11□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Defb47Q30KN1 79 aa6.11□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Vmo1Q5SXG7 201 aa6.11□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Igkv1-99F6XWB2 120 aa6.1□□□□□ -1.43
Bdnf-202ENSMUST00000111042 GfyJ3KML8 504 aa6.1□□□□□ -1.43
Bdnf-202ENSMUST00000111042 SrarpQ3ULG3 163 aa6.1□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Gm5464Q3UY29 175 aa6.1□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Klk5Q9D140 293 aa6.1□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Cep192E9Q4Y4 2514 aaKnown RBP6.1□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Trav13n-1A0A0G2JEU8 110 aa6.1□□□□□ -1.43
Bdnf-202ENSMUST00000111042 4930442H23RikQ9D5G7 103 aa6.1□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Pfn2Q9JJV2 140 aa6.1□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Tspan13Q9D8C2 204 aa6.09□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Notch2O35516 2470 aa6.09□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Rbx1P62878 108 aa6.09□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Fgfbp3Q1HCM0 245 aa6.09□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Cmc4Q61908 68 aa6.09□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Trav9d-4A0A0G2JG37 103 aa6.09□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Gm10509O88255 85 aa6.09□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Ly6c2P0CW03 131 aa6.09□□□□□ -1.43
Bdnf-202ENSMUST00000111042 Gata1P17679 413 aa6.08□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Usp9yF8VPU6 2556 aa6.08□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Trav3-1Q5R1I8 114 aa6.08□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Cox11Q6P8I6 275 aa6.08□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Glrp1E9Q9S8 174 aa6.08□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Sh2d1aO88890 126 aa6.08□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Prss58Q8BW11 241 aa6.08□□□□□ -1.44
Bdnf-202ENSMUST00000111042 SpinklQ8CEK3 90 aa6.08□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Krtap27-1E9PX37 202 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Ighv1-72P01751 139 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Prh1P05142 261 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Dand5Q76LW6 185 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Morn5Q9DAI9 170 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Gm9767G3X930 207 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Gm21748Q3UE70 102 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Znf740Q6NZQ6 180 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Gm10300Q8C8P7 189 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Igkv4-68A0A0B4J1I7 117 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Dad1P61804 113 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Gm10767Q3TQP0 103 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Mzt1Q8BUR9 78 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Mfap4Q9D1H9 257 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Krtap26-1Q9D7N2 215 aa6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Utp20Q5XG71 2788 aaKnown RBP6.07□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Ighv2-6-8A0A0A6YWY9 116 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Cfc1P97766 202 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Fxyd5P97808 178 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 SbsponQ3UPR9 264 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Defb42Q8BVB5 75 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 P01729 129 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Cks1bP61025 79 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Gm904Q3V2L5 102 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Gm9922Q8C3P1 144 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Trav13-4-dv7A0A075B6C2 110 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 BC025920Q3US60 128 aa6.06□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Igkv4-78A0A0A6YYE5 119 aa6.05□□□□□ -1.44
Bdnf-202ENSMUST00000111042 AngP21570 145 aa6.05□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Morn3Q8C5T4 241 aa6.05□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Anapc13Q8R034 74 aa6.05□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Gm9936Q8C864 160 aa6.05□□□□□ -1.44
Bdnf-202ENSMUST00000111042 LbhQ9CX60 105 aa6.05□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Ociad2Q9D8W7 154 aa6.05□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Gata3P23772 443 aa6.05□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Zc2hc1bQ9D534 172 aa6.05□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Cd164l2Q9D6W7 172 aa6.05□□□□□ -1.44
Bdnf-202ENSMUST00000111042 FlncQ8VHX6 2726 aaKnown RBP6.04□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Trav13d-4A0A0G2JFX3 110 aa6.04□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Tmem86bQ497J1 226 aa6.04□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Ighv1-5A0A0A6YWG2 117 aa6.04□□□□□ -1.44
Bdnf-202ENSMUST00000111042 Atp6v0e2Q91XE7 81 aa6.04□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms