RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Rif1Q6PR54 2419 aaKnown RBP6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Tmem254aP0DN89 123 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Tmem254bP0DN90 123 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Tmem254cP0DN91 123 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Vpreb1P13372 142 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Trav6n-6A0A075B6B2 114 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Trav4-3A0A0B4J1K1 110 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Ighv1-74A0A0G2JGK2 117 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Eif4ebp2P70445 120 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Fhl4Q8CDC8 279 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Dmrtc1c1Q9D410 238 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 P01789 122 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Cox7cP17665 63 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Them7Q9DCP4 223 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Trav13d-1A0A075B606 110 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Trbv13-1A0A0B4J1P8 112 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Igf1P05017 153 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Pla2g5P97391 137 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Fxyd1Q9Z239 92 aa6.89□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Gata3P23772 443 aa6.88□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Cysrt1Q9D1E4 142 aa6.88□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Igkv8-28A0A0G2JE47 121 aa6.88□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Q80X32 188 aaKnown RBP6.88□□□□□ -1.31
Polr1a-201ENSMUST00000055296 C920008G01RikA0A0B4J1N1 112 aa6.88□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Trav4d-3A0A075B625 110 aa6.88□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Cdkn2aQ64364 169 aa6.88□□□□□ -1.31
Polr1a-201ENSMUST00000055296 TectaO08523 2155 aa6.88□□□□□ -1.31
Polr1a-201ENSMUST00000055296 P06320 134 aa6.88□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Pde6gP09174 87 aa6.88□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Zic4Q61467 341 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Cspg4Q8VHY0 2327 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Atox1O08997 68 aaKnown RBP6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Wfdc2Q9DAU7 174 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Ighv5-8A0A075B676 92 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Gm28539A0A087WSL9 92 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 P04946 108 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Fam110aQ8R184 296 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Mrpl35Q9CQL6 188 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Ighv8-2A0A0A6YW58 119 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Q99M08 65 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 LoxP28301 411 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Gm21994F6T2D2 329 aa6.87□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Ighv1-19A0A0A6YWX0 117 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Q91WE4 72 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Plac8l1Q08EJ0 177 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 EpopQ7TNS8 369 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 DscamQ9ERC8 2013 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Col4a3Q9QZS0 1669 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Gm10553J3QPF1 123 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 LhbO09108 141 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 4930470P17RikQ9D542 155 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Gm37988J3QM41 62 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Sh2d1aO88890 126 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Psmb8P28063 276 aa6.86□□□□□ -1.31
Polr1a-201ENSMUST00000055296 SostQ99P68 211 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 UrahQ9CRB3 118 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Obox8V9GWY9 217 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Odf1Q61999 247 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Ufsp1Q9CZP0 217 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Cryba4Q9JJV0 196 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Ighv1-77A0A0G2JGS9 117 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Wipf1Q8K1I7 493 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 A0A1L1SR50 188 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Atp23Q9CWQ3 201 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Rpl39P62892 51 aa6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Tmem223Q9CQE2 199 aaKnown RBP6.85□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Ighv1-76A0A0G2JFE9 117 aa6.84□□□□□ -1.31
Polr1a-201ENSMUST00000055296 3110082J24RikF6Z6Z2 108 aa6.84□□□□□ -1.31
Polr1a-201ENSMUST00000055296 EnhoQ8K1D8 76 aa6.84□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Ndufc1Q9CQY9 76 aa6.84□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Adamts20P59511 1906 aa6.84□□□□□ -1.31
Polr1a-201ENSMUST00000055296 1520401A03RikA0A0J9YVH6 598 aa6.84□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Wdr90Q6ZPG2 1874 aa6.84□□□□□ -1.31
Polr1a-201ENSMUST00000055296 P01638 115 aa6.84□□□□□ -1.31
Polr1a-201ENSMUST00000055296 P01729 129 aa6.84□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Gm10192Q3V0S1 108 aa6.84□□□□□ -1.31
Polr1a-201ENSMUST00000055296 Ighv1-82A0A0G2JEU7 117 aa6.84□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Wfdc11A2A5H7 82 aa6.84□□□□□ -1.32
Polr1a-201ENSMUST00000055296 AW146154Q3TPQ7 468 aa6.84□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Znf672Q99LH4 468 aa6.83□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Gm10542F6XDR3 90 aa6.83□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Fam19a5Q91WE9 132 aa6.83□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Klk5Q9D140 293 aa6.83□□□□□ -1.32
Polr1a-201ENSMUST00000055296 BC067074F6RXI4 2391 aa6.83□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Ube2d2P62838 147 aa6.83□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Gm9970F6ZED4 185 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Ighv1-52A0A0A6YXC3 117 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 P01753 117 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 PlaurP35456 327 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 MgamB5THE2 1827 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Gm10647E9Q8X0 124 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Zfp36l1P23950 338 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Wfdc15aQ8BH89 80 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Igkv12-89A0A0G2JGW8 112 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Defb40Q70KL2 73 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Pkd1l2Q7TN88 2461 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Ighv1-11A0A0A6YWI9 117 aa6.82□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Zc2hc1aQ8BJH1 324 aa6.81□□□□□ -1.32
Polr1a-201ENSMUST00000055296 BaalcQ8VHV1 145 aa6.81□□□□□ -1.32
Polr1a-201ENSMUST00000055296 Tcte2E9PY37 120 aa6.81□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 77.9 ms