RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Defb26Q30KN7 186 aa12.82□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Gm7075D3Z497 112 aa12.82□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Trav13n-2A0A0G2JF93 110 aa12.81□□□□□ -0.36
Col17a1-201ENSMUST00000026045 P01729 129 aa12.81□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Znf672Q99LH4 468 aa12.81□□□□□ -0.36
Col17a1-201ENSMUST00000026045 P01738 130 aa12.81□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Cox17P56394 63 aa12.81□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Ighv1-64A0A075B5X3 117 aa12.81□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Ep300B2RWS6 2412 aa12.81□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Dand5Q76LW6 185 aa12.8□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Rpl35aO55142 110 aa12.8□□□□□ -0.36
Col17a1-201ENSMUST00000026045 CrygdP04342 174 aa12.8□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Prop1P97458 223 aa12.8□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Wdr90Q6ZPG2 1874 aa12.8□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Cox6b1P56391 86 aaKnown RBP12.79□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Gm9949Q8C9F4 104 aa12.79□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Ighv1-74A0A0G2JGK2 117 aa12.79□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Gata4Q08369 441 aa12.79□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Ndufa4l2Q4FZG9 87 aa12.79□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Igkv3-1A0A075B5P1 119 aa12.78□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Spry2Q9QXV8 315 aa12.78□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Sec61gP60060 68 aa12.78□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Med13lQ6JPI3 2207 aa12.78□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Ighv1-50A0A075B5W1 117 aa12.78□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Gm15217A2CG07 155 aa12.78□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Wipf1Q8K1I7 493 aa12.78□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Serp1Q9Z1W5 66 aa12.78□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Gm17472A0A075B683 117 aa12.77□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Ndufs5Q99LY9 106 aa12.77□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Notch4P31695 1964 aa12.77□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Mapk1ip1lQ8BH93 242 aa12.76□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Pde6gP09174 87 aa12.76□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Cdip1Q9DB75 208 aa12.76□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Ighv1-4A0A075B5T4 117 aa12.76□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Crip3Q6Q6R3 243 aa12.76□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Map6d1Q14BB9 191 aa12.76□□□□□ -0.37
Col17a1-201ENSMUST00000026045 H2al1aQ5M8Q2 105 aa12.76□□□□□ -0.37
Col17a1-201ENSMUST00000026045 H2al1eQ810S6 105 aa12.76□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Sp5Q9JHX2 398 aa12.76□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Abca4O35600 2310 aa12.75□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Igkv3-9A0A140T8P4 119 aa12.75□□□□□ -0.37
Col17a1-201ENSMUST00000026045 A130051J06RikQ8CAU1 227 aa12.75□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Tet1Q3URK3 2007 aaKnown RBP12.75□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Igkv1-122A0A140T8M9 119 aa12.75□□□□□ -0.37
Col17a1-201ENSMUST00000026045 BlcapP62951 87 aa12.75□□□□□ -0.37
Col17a1-201ENSMUST00000026045 P04943 107 aa12.75□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Klk12B2RVZ0 247 aa12.74□□□□□ -0.37
Col17a1-201ENSMUST00000026045 9230109A22RikQ8BHE6 111 aa12.74□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Tet2Q4JK59 1912 aaKnown RBP12.74□□□□□ -0.37
Col17a1-201ENSMUST00000026045 F5O88783 2183 aa12.74□□□□□ -0.37
Col17a1-201ENSMUST00000026045 P01786 117 aa12.73□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Lypd6Q8BPP5 171 aa12.73□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Ndufs7Q9DC70 224 aa12.73□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Ighv8-11A0A075B5X4 119 aa12.73□□□□□ -0.37
Col17a1-201ENSMUST00000026045 H2al1kJ3QP08 105 aa12.73□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Igkv3-2A0A075B5P0 119 aa12.73□□□□□ -0.37
Col17a1-201ENSMUST00000026045 P01750 117 aa12.72□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Rpl39lQ9CQD0 51 aa12.72□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Gm37988J3QM41 62 aa12.72□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Rnf152Q8BG47 203 aa12.72□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Q9D8Q6 235 aa12.72□□□□□ -0.37
Col17a1-201ENSMUST00000026045 P04944 107 aa12.72□□□□□ -0.37
Col17a1-201ENSMUST00000026045 1110002E22RikE0CYV9 1786 aa12.72□□□□□ -0.37
Col17a1-201ENSMUST00000026045 2310009B15RikA0A0A6YWI4 143 aa12.72□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Klk9Q32M27 251 aa12.71□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Cmc4Q61908 68 aa12.71□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Ly6hQ9WUC3 139 aa12.71□□□□□ -0.37
Col17a1-201ENSMUST00000026045 Fxyd5P97808 178 aa12.7□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Fer1l4A3KGK3 1992 aa12.7□□□□□ -0.38
Col17a1-201ENSMUST00000026045 H2al1bA0A087WP11 105 aa12.7□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Trbv16A0A0B4J1H3 115 aa12.7□□□□□ -0.38
Col17a1-201ENSMUST00000026045 AgrnA2ASQ1 1950 aa12.7□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Trav13-1A0A075B644 110 aa12.7□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Ighv5-9-1A0A0A6YVS4 126 aa12.7□□□□□ -0.38
Col17a1-201ENSMUST00000026045 4930535I16RikQ9CUI2 172 aa12.69□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Gm5629P06327 117 aa12.69□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Rnf185Q91YT2 192 aa12.69□□□□□ -0.38
Col17a1-201ENSMUST00000026045 P01753 117 aa12.69□□□□□ -0.38
Col17a1-201ENSMUST00000026045 9130230L23RikQ8CC80 163 aa12.69□□□□□ -0.38
Col17a1-201ENSMUST00000026045 1520401A03RikA0A0J9YVH6 598 aa12.68□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Spink13Q3UTS8 97 aa12.68□□□□□ -0.38
Col17a1-201ENSMUST00000026045 4930432M17RikQ3V0W9 174 aa12.68□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Ube2d3P61079 147 aa12.67□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Ube2d2P62838 147 aa12.67□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Rnf114Q9ET26 229 aa12.67□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Cspg4Q8VHY0 2327 aa12.67□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Gm20604F8WIA3 75 aa12.67□□□□□ -0.38
Col17a1-201ENSMUST00000026045 E030018B13RikJ3QMS9 113 aa12.67□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Reg3gO09049 174 aa12.67□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Prr15lQ8JZM2 100 aa12.67□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Gm21994F6T2D2 329 aa12.67□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Leap2Q91V13 76 aa12.67□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Nsun4C4P6S0 806 aaKnown RBP12.66□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Gm7257D3YX25 99 aa12.66□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Gm10518F6UQQ9 182 aa12.66□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Gm10542F6XDR3 90 aa12.66□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Odf1Q61999 247 aa12.66□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Trav13-2A0A075B649 110 aa12.65□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Gm10553J3QPF1 123 aa12.65□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Ube2d1P61080 147 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms