Protein–RNA interactions for Protein: A3KGK3

Fer1l4, Fer-1-like protein 4, mousemouse

Predictions only

Length 1,992 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fer1l4A3KGK3 Gm25239-201ENSMUST00000174915 86 ntBASIC37.91■■■■□ 3.66
Fer1l4A3KGK3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
Fer1l4A3KGK3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Fer1l4A3KGK3 Gm24109-201ENSMUST00000175489 103 ntBASIC33.09■■■□□ 2.89
Fer1l4A3KGK3 Gm15042-201ENSMUST00000120212 883 ntBASIC32.89■■■□□ 2.86
Fer1l4A3KGK3 Gm15045-201ENSMUST00000117359 883 ntBASIC32.36■■■□□ 2.77
Fer1l4A3KGK3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Fer1l4A3KGK3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Fer1l4A3KGK3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Fer1l4A3KGK3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Fer1l4A3KGK3 Gm23366-201ENSMUST00000175022 89 ntBASIC31.57■■■□□ 2.64
Fer1l4A3KGK3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Fer1l4A3KGK3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.91■■■□□ 2.54
Fer1l4A3KGK3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Fer1l4A3KGK3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Fer1l4A3KGK3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.53■■■□□ 2.48
Fer1l4A3KGK3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.45■■■□□ 2.47
Fer1l4A3KGK3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Fer1l4A3KGK3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Fer1l4A3KGK3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Fer1l4A3KGK3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Fer1l4A3KGK3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Fer1l4A3KGK3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Fer1l4A3KGK3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.03■■■□□ 2.4
Fer1l4A3KGK3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Fer1l4A3KGK3 Gm25238-201ENSMUST00000174914 89 ntBASIC29.99■■■□□ 2.39
Fer1l4A3KGK3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.98■■■□□ 2.39
Fer1l4A3KGK3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Fer1l4A3KGK3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Fer1l4A3KGK3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
Fer1l4A3KGK3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Fer1l4A3KGK3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.52■■■□□ 2.32
Fer1l4A3KGK3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Fer1l4A3KGK3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
Fer1l4A3KGK3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Fer1l4A3KGK3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Fer1l4A3KGK3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Fer1l4A3KGK3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.1■■■□□ 2.25
Fer1l4A3KGK3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Fer1l4A3KGK3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
Fer1l4A3KGK3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.05■■■□□ 2.24
Fer1l4A3KGK3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Fer1l4A3KGK3 Gm27325-201ENSMUST00000175467 74 ntBASIC28.84■■■□□ 2.21
Fer1l4A3KGK3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.83■■■□□ 2.21
Fer1l4A3KGK3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.79■■■□□ 2.2
Fer1l4A3KGK3 Gm25262-201ENSMUST00000174934 133 ntBASIC28.7■■■□□ 2.19
Fer1l4A3KGK3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Fer1l4A3KGK3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Fer1l4A3KGK3 Psd-208ENSMUST00000224556 2034 ntBASIC28.6■■■□□ 2.17
Fer1l4A3KGK3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.41■■■□□ 2.14
Fer1l4A3KGK3 Rab21-202ENSMUST00000218831 843 ntBASIC28.37■■■□□ 2.13
Fer1l4A3KGK3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.33■■■□□ 2.13
Fer1l4A3KGK3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.31■■■□□ 2.12
Fer1l4A3KGK3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Fer1l4A3KGK3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.3■■■□□ 2.12
Fer1l4A3KGK3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Fer1l4A3KGK3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.28■■■□□ 2.12
Fer1l4A3KGK3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Fer1l4A3KGK3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Fer1l4A3KGK3 Gm26115-201ENSMUST00000175605 87 ntBASIC28.21■■■□□ 2.11
Fer1l4A3KGK3 Gm8109-201ENSMUST00000194076 746 ntBASIC28.16■■■□□ 2.1
Fer1l4A3KGK3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Fer1l4A3KGK3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.11■■■□□ 2.09
Fer1l4A3KGK3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.08■■■□□ 2.09
Fer1l4A3KGK3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.04■■■□□ 2.08
Fer1l4A3KGK3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Fer1l4A3KGK3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Fer1l4A3KGK3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.01■■■□□ 2.07
Fer1l4A3KGK3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Fer1l4A3KGK3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Fer1l4A3KGK3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Fer1l4A3KGK3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Fer1l4A3KGK3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.9■■■□□ 2.06
Fer1l4A3KGK3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Fer1l4A3KGK3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.9■■■□□ 2.06
Fer1l4A3KGK3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Fer1l4A3KGK3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Fer1l4A3KGK3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Fer1l4A3KGK3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Fer1l4A3KGK3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Fer1l4A3KGK3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Fer1l4A3KGK3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Fer1l4A3KGK3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Fer1l4A3KGK3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Fer1l4A3KGK3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Fer1l4A3KGK3 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.49■■□□□ 1.99
Fer1l4A3KGK3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Fer1l4A3KGK3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.46■■□□□ 1.99
Fer1l4A3KGK3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.44■■□□□ 1.98
Fer1l4A3KGK3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.43■■□□□ 1.98
Fer1l4A3KGK3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Fer1l4A3KGK3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Fer1l4A3KGK3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.35■■□□□ 1.97
Fer1l4A3KGK3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Fer1l4A3KGK3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Fer1l4A3KGK3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Fer1l4A3KGK3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.27■■□□□ 1.96
Fer1l4A3KGK3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Fer1l4A3KGK3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Fer1l4A3KGK3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms