RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 Trav3-1Q5R1I8 114 aa15.89■□□□□ 0.13
Trim9-208ENSMUST00000221370 Srsf9Q9D0B0 222 aaKnown RBP15.89■□□□□ 0.13
Trim9-208ENSMUST00000221370 Igkv2-137A0A0B4J1H6 120 aa15.89■□□□□ 0.13
Trim9-208ENSMUST00000221370 Gm37988J3QM41 62 aa15.89■□□□□ 0.13
Trim9-208ENSMUST00000221370 Pglyrp1O88593 182 aa15.89■□□□□ 0.13
Trim9-208ENSMUST00000221370 Defa3P28310 93 aa15.89■□□□□ 0.13
Trim9-208ENSMUST00000221370 PlaurP35456 327 aa15.89■□□□□ 0.13
Trim9-208ENSMUST00000221370 Defa10P50708 93 aa15.89■□□□□ 0.13
Trim9-208ENSMUST00000221370 Defa15P50713 93 aa15.89■□□□□ 0.13
Trim9-208ENSMUST00000221370 4930596D02RikQ3V0H9 216 aa15.89■□□□□ 0.13
Trim9-208ENSMUST00000221370 Gm17455G3UW87 128 aa15.88■□□□□ 0.13
Trim9-208ENSMUST00000221370 Ccl19O70460 108 aa15.88■□□□□ 0.13
Trim9-208ENSMUST00000221370 PolP10400 120 aa15.88■□□□□ 0.13
Trim9-208ENSMUST00000221370 Tspan13Q9D8C2 204 aa15.88■□□□□ 0.13
Trim9-208ENSMUST00000221370 Ighv1-5A0A0A6YWG2 117 aa15.87■□□□□ 0.13
Trim9-208ENSMUST00000221370 Ube2d3P61079 147 aa15.87■□□□□ 0.13
Trim9-208ENSMUST00000221370 Ube2d2P62838 147 aa15.87■□□□□ 0.13
Trim9-208ENSMUST00000221370 C1qcQ02105 246 aa15.87■□□□□ 0.13
Trim9-208ENSMUST00000221370 Q5BN45 167 aa15.87■□□□□ 0.13
Trim9-208ENSMUST00000221370 Rs1Q9Z1L4 224 aa15.87■□□□□ 0.13
Trim9-208ENSMUST00000221370 Gm1553Q66VB7 94 aa15.87■□□□□ 0.13
Trim9-208ENSMUST00000221370 Atp6v0e2Q91XE7 81 aa15.87■□□□□ 0.13
Trim9-208ENSMUST00000221370 Tac4Q99N14 128 aa15.87■□□□□ 0.13
Trim9-208ENSMUST00000221370 Uqcrfs1Q9CR68 274 aa15.87■□□□□ 0.13
Trim9-208ENSMUST00000221370 Ighv1-85A0A075B5Y6 117 aa15.86■□□□□ 0.13
Trim9-208ENSMUST00000221370 Foxi1Q922I5 372 aa15.86■□□□□ 0.13
Trim9-208ENSMUST00000221370 Tcrg-C1A0A075B5Z0 172 aa15.86■□□□□ 0.13
Trim9-208ENSMUST00000221370 Cited2O35740 269 aa15.86■□□□□ 0.13
Trim9-208ENSMUST00000221370 Fam208bQ5DTT3 2382 aa15.86■□□□□ 0.13
Trim9-208ENSMUST00000221370 Gm2564F6Z9S8 108 aa15.85■□□□□ 0.13
Trim9-208ENSMUST00000221370 Dmrt3Q80WT2 476 aa15.85■□□□□ 0.13
Trim9-208ENSMUST00000221370 Sptan1P16546 2472 aaKnown RBP15.85■□□□□ 0.13
Trim9-208ENSMUST00000221370 Armcx4E9PWM3 2356 aa15.85■□□□□ 0.13
Trim9-208ENSMUST00000221370 Mllt11P97783 90 aa15.85■□□□□ 0.13
Trim9-208ENSMUST00000221370 NrepQ07475 68 aa15.85■□□□□ 0.13
Trim9-208ENSMUST00000221370 Ighv1-52A0A0A6YXC3 117 aa15.84■□□□□ 0.13
Trim9-208ENSMUST00000221370 F11rO88792 300 aa15.84■□□□□ 0.13
Trim9-208ENSMUST00000221370 Trav2Q5R1I9 109 aa15.84■□□□□ 0.13
Trim9-208ENSMUST00000221370 Gm9961Q8BNV2 113 aa15.84■□□□□ 0.13
Trim9-208ENSMUST00000221370 Triap1Q9D8Z2 76 aa15.84■□□□□ 0.13
Trim9-208ENSMUST00000221370 Snrpd3P62320 126 aaKnown RBP15.83■□□□□ 0.12
Trim9-208ENSMUST00000221370 Wfdc15aQ8BH89 80 aa15.83■□□□□ 0.12
Trim9-208ENSMUST00000221370 Spg11Q3UHA3 2430 aa15.82■□□□□ 0.12
Trim9-208ENSMUST00000221370 BatfO35284 125 aa15.82■□□□□ 0.12
Trim9-208ENSMUST00000221370 Higd1aQ9JLR9 95 aa15.82■□□□□ 0.12
Trim9-208ENSMUST00000221370 Gm9925F6T2U3 160 aa15.81■□□□□ 0.12
Trim9-208ENSMUST00000221370 BC048562Q80ZQ7 204 aa15.81■□□□□ 0.12
Trim9-208ENSMUST00000221370 Clec5aQ9R007 190 aa15.81■□□□□ 0.12
Trim9-208ENSMUST00000221370 P06329 120 aa15.8■□□□□ 0.12
Trim9-208ENSMUST00000221370 Gm21370Q3T9V6 190 aa15.8■□□□□ 0.12
Trim9-208ENSMUST00000221370 Prr3Q811B5 190 aaKnown RBP15.8■□□□□ 0.12
Trim9-208ENSMUST00000221370 Hoxd3P09027 433 aa15.8■□□□□ 0.12
Trim9-208ENSMUST00000221370 Fam216aQ9DB54 251 aa15.8■□□□□ 0.12
Trim9-208ENSMUST00000221370 HilpdaQ9JLS0 64 aa15.8■□□□□ 0.12
Trim9-208ENSMUST00000221370 MsmbO08540 113 aa15.79■□□□□ 0.12
Trim9-208ENSMUST00000221370 FcorP0DJI6 106 aa15.79■□□□□ 0.12
Trim9-208ENSMUST00000221370 4930564D02RikQ9D4S4 103 aa15.79■□□□□ 0.12
Trim9-208ENSMUST00000221370 Klhdc1Q80YG3 406 aa15.79■□□□□ 0.12
Trim9-208ENSMUST00000221370 NbeaQ9EPN1 2936 aa15.79■□□□□ 0.12
Trim9-208ENSMUST00000221370 Defa-rs7P50715 91 aa15.78■□□□□ 0.12
Trim9-208ENSMUST00000221370 Ighv2-3A0A075B696 115 aa15.78■□□□□ 0.12
Trim9-208ENSMUST00000221370 LeprotO89013 131 aa15.78■□□□□ 0.12
Trim9-208ENSMUST00000221370 P01802 115 aa15.78■□□□□ 0.12
Trim9-208ENSMUST00000221370 Ighv1-58A0A075B5W9 117 aa15.77■□□□□ 0.12
Trim9-208ENSMUST00000221370 Krtap27-1E9PX37 202 aa15.77■□□□□ 0.12
Trim9-208ENSMUST00000221370 Gm10553J3QPF1 123 aa15.77■□□□□ 0.12
Trim9-208ENSMUST00000221370 Csmd2V9GX34 3611 aa15.77■□□□□ 0.12
Trim9-208ENSMUST00000221370 GalmQ8K157 342 aa15.77■□□□□ 0.11
Trim9-208ENSMUST00000221370 Trbv17A0A140T8P8 114 aa15.76■□□□□ 0.11
Trim9-208ENSMUST00000221370 AI854703Q8BIN3 203 aa15.76■□□□□ 0.11
Trim9-208ENSMUST00000221370 Ifitm1Q9D103 106 aa15.76■□□□□ 0.11
Trim9-208ENSMUST00000221370 Klk5Q9D140 293 aa15.76■□□□□ 0.11
Trim9-208ENSMUST00000221370 Ankrd39Q9D2X0 183 aa15.76■□□□□ 0.11
Trim9-208ENSMUST00000221370 Insl3O09107 122 aa15.76■□□□□ 0.11
Trim9-208ENSMUST00000221370 Il1f10Q8R459 152 aa15.76■□□□□ 0.11
Trim9-208ENSMUST00000221370 P04219 140 aa15.75■□□□□ 0.11
Trim9-208ENSMUST00000221370 TtrP07309 147 aa15.75■□□□□ 0.11
Trim9-208ENSMUST00000221370 Mpv17l2Q8VIK2 200 aa15.75■□□□□ 0.11
Trim9-208ENSMUST00000221370 Lrrk2Q5S006 2527 aa15.75■□□□□ 0.11
Trim9-208ENSMUST00000221370 Lelp1Q9DAE3 120 aa15.75■□□□□ 0.11
Trim9-208ENSMUST00000221370 Gm28044L7N1X0 119 aa15.74■□□□□ 0.11
Trim9-208ENSMUST00000221370 Gm933J3QPC1 141 aa15.73■□□□□ 0.11
Trim9-208ENSMUST00000221370 Pkd1l2Q7TN88 2461 aa15.73■□□□□ 0.11
Trim9-208ENSMUST00000221370 Ighv2-7A0A075B5Q8 116 aa15.73■□□□□ 0.11
Trim9-208ENSMUST00000221370 P01896 185 aa15.73■□□□□ 0.11
Trim9-208ENSMUST00000221370 Runx1Q03347 451 aa15.73■□□□□ 0.11
Trim9-208ENSMUST00000221370 Sptbn4E9PX29 2561 aa15.73■□□□□ 0.11
Trim9-208ENSMUST00000221370 Atp5lQ9CPQ8 103 aa15.72■□□□□ 0.11
Trim9-208ENSMUST00000221370 Gm28269A0A087WSG3 125 aa15.72■□□□□ 0.11
Trim9-208ENSMUST00000221370 Tmem263Q9DAM7 115 aa15.71■□□□□ 0.11
Trim9-208ENSMUST00000221370 Ighv5-9-1A0A0A6YVS4 126 aa15.71■□□□□ 0.11
Trim9-208ENSMUST00000221370 Ighv2-6-8A0A0A6YWY9 116 aa15.71■□□□□ 0.11
Trim9-208ENSMUST00000221370 P01753 117 aa15.71■□□□□ 0.11
Trim9-208ENSMUST00000221370 CckP09240 115 aa15.71■□□□□ 0.11
Trim9-208ENSMUST00000221370 Ankhd1E9PUR0 2548 aaKnown RBP15.7■□□□□ 0.1
Trim9-208ENSMUST00000221370 NpwA0A1L1STR8 176 aa15.7■□□□□ 0.1
Trim9-208ENSMUST00000221370 Mrpl35Q9CQL6 188 aa15.7■□□□□ 0.1
Trim9-208ENSMUST00000221370 Gm6793B2RXM2 351 aa15.69■□□□□ 0.1
Trim9-208ENSMUST00000221370 Spata45Q9CVW4 97 aa15.69■□□□□ 0.1
Trim9-208ENSMUST00000221370 Cdip1Q9DB75 208 aa15.69■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 229.4 ms