RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

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Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 NischQ80TM9 1593 aa40,49■■■■■ 4,07
Trim9-208ENSMUST00000221370 Gm35339A0A140LHH9 1649 aa39,76■■■■□ 3,96
Trim9-208ENSMUST00000221370 Abcc9P70170 1546 aa39,41■■■■□ 3,9
Trim9-208ENSMUST00000221370 Abcc8B2RUS7 1588 aa38,38■■■■□ 3,73
Trim9-208ENSMUST00000221370 Rtl1Q7M732 1744 aa37,89■■■■□ 3,66
Trim9-208ENSMUST00000221370 Rhox8Q6VSS7 320 aa37,64■■■■□ 3,62
Trim9-208ENSMUST00000221370 Ccdc180J3QNE4 1664 aa37,2■■■■□ 3,55
Trim9-208ENSMUST00000221370 Zcchc6Q5BLK4 1491 aaKnown RBP36,31■■■■□ 3,4
Trim9-208ENSMUST00000221370 Dcaf1Q80TR8 1506 aa36,06■■■■□ 3,36
Trim9-208ENSMUST00000221370 Rpgrip1Q9EPQ2 1331 aa35,9■■■■□ 3,34
Trim9-208ENSMUST00000221370 ScribQ80U72 1612 aa35,52■■■■□ 3,28
Trim9-208ENSMUST00000221370 Rb1cc1Q9ESK9 1588 aa35,49■■■■□ 3,27
Trim9-208ENSMUST00000221370 HrcG5E8J6 738 aa35,39■■■■□ 3,26
Trim9-208ENSMUST00000221370 Baz1aO88379 1555 aa35,16■■■■□ 3,22
Trim9-208ENSMUST00000221370 Acin1Q9JIX8 1338 aaKnown RBP35,06■■■■□ 3,2
Trim9-208ENSMUST00000221370 Kdm5dQ62240 1548 aa34,97■■■■□ 3,19
Trim9-208ENSMUST00000221370 Ccdc136Q3TVA9 1136 aa34,83■■■■□ 3,17
Trim9-208ENSMUST00000221370 NacadQ5SWP3 1504 aa34,7■■■■□ 3,15
Trim9-208ENSMUST00000221370 Crybg2B7ZCC2 1516 aa34,57■■■■□ 3,13
Trim9-208ENSMUST00000221370 Smarca2Q6DIC0 1577 aa34,41■■■■□ 3,1
Trim9-208ENSMUST00000221370 Trim41Q5NCC3 630 aa34,36■■■■□ 3,09
Trim9-208ENSMUST00000221370 Ehmt2Q9Z148 1263 aaKnown RBP34,31■■■■□ 3,08
Trim9-208ENSMUST00000221370 Cep164Q5DU05 1446 aa34,2■■■■□ 3,07
Trim9-208ENSMUST00000221370 Sycp2Q9CUU3 1500 aa33,91■■■■□ 3,02
Trim9-208ENSMUST00000221370 Pcgf6Q99NA9 353 aa33,69■■■□□ 2,98
Trim9-208ENSMUST00000221370 Brd4Q9ESU6 1400 aaKnown RBP33,61■■■□□ 2,97
Trim9-208ENSMUST00000221370 Rsf1E9PWW9 1441 aaKnown RBP33,51■■■□□ 2,95
Trim9-208ENSMUST00000221370 Golga3P55937 1487 aa33,36■■■□□ 2,93
Trim9-208ENSMUST00000221370 Chic1Q8CBW7 227 aa33,34■■■□□ 2,93
Trim9-208ENSMUST00000221370 Cecr2E9Q2Z1 1453 aa33,33■■■□□ 2,93
Trim9-208ENSMUST00000221370 Cngb1E1AZ71 1325 aa33,31■■■□□ 2,92
Trim9-208ENSMUST00000221370 Ccdc88bQ4QRL3 1481 aa33,2■■■□□ 2,91
Trim9-208ENSMUST00000221370 Synj1Q8CHC4 1574 aa33,19■■■□□ 2,9
Trim9-208ENSMUST00000221370 BicraF8VPZ9 1578 aa33,05■■■□□ 2,88
Trim9-208ENSMUST00000221370 Gab3Q8BSM5 595 aa33,04■■■□□ 2,88
Trim9-208ENSMUST00000221370 Supt5hO55201 1082 aaKnown RBP33■■■□□ 2,87
Trim9-208ENSMUST00000221370 CftrP26361 1476 aa33■■■□□ 2,87
Trim9-208ENSMUST00000221370 Top2bQ64511 1612 aa32,96■■■□□ 2,87
Trim9-208ENSMUST00000221370 NefmP08553 848 aa32,91■■■□□ 2,86
Trim9-208ENSMUST00000221370 Cttnbp2B9EJA2 1648 aa32,82■■■□□ 2,84
Trim9-208ENSMUST00000221370 Mier1Q5UAK0 511 aa32,69■■■□□ 2,82
Trim9-208ENSMUST00000221370 Esf1Q3V1V3 845 aaKnown RBP32,68■■■□□ 2,82
Trim9-208ENSMUST00000221370 Smarca4Q3TKT4 1613 aaKnown RBP32,53■■■□□ 2,8
Trim9-208ENSMUST00000221370 Rapgef2Q8CHG7 1496 aa32,49■■■□□ 2,79
Trim9-208ENSMUST00000221370 Cc2d2aQ8CFW7 1633 aa32,49■■■□□ 2,79
Trim9-208ENSMUST00000221370 Zeb1Q64318 1117 aa32,45■■■□□ 2,79
Trim9-208ENSMUST00000221370 Fmn1Q05860 1466 aa32,43■■■□□ 2,78
Trim9-208ENSMUST00000221370 Top2aQ01320 1528 aaKnown RBP32,36■■■□□ 2,77
Trim9-208ENSMUST00000221370 Neurod1Q60867 357 aa32,27■■■□□ 2,76
Trim9-208ENSMUST00000221370 Cep162Q6ZQ06 1403 aa32,17■■■□□ 2,74
Trim9-208ENSMUST00000221370 Sall2Q9QX96 1004 aa32,15■■■□□ 2,74
Trim9-208ENSMUST00000221370 UbtfP25976 765 aaKnown RBP32,03■■■□□ 2,72
Trim9-208ENSMUST00000221370 Iqgap2Q3UQ44 1575 aa32,02■■■□□ 2,72
Trim9-208ENSMUST00000221370 Eif4g1Q6NZJ6 1600 aaKnown RBP31,93■■■□□ 2,7
Trim9-208ENSMUST00000221370 Las1lA2BE28 776 aaKnown RBP31,92■■■□□ 2,7
Trim9-208ENSMUST00000221370 Atad2bE9Q166 1460 aaKnown RBP31,79■■■□□ 2,68
Trim9-208ENSMUST00000221370 TnnQ80Z71 1560 aa31,79■■■□□ 2,68
Trim9-208ENSMUST00000221370 Myt1lP97500 1187 aa31,77■■■□□ 2,68
Trim9-208ENSMUST00000221370 Anks4bQ8K3X6 423 aa31,72■■■□□ 2,67
Trim9-208ENSMUST00000221370 Clip1Q922J3 1391 aa31,7■■■□□ 2,67
Trim9-208ENSMUST00000221370 Npm2Q80W85 207 aa31,7■■■□□ 2,67
Trim9-208ENSMUST00000221370 ClspnQ80YR7 1315 aa31,69■■■□□ 2,66
Trim9-208ENSMUST00000221370 Aebp2Q9Z248 504 aaKnown RBP31,67■■■□□ 2,66
Trim9-208ENSMUST00000221370 Wdr66E9Q743 1299 aa31,61■■■□□ 2,65
Trim9-208ENSMUST00000221370 Ncapd3Q6ZQK0 1506 aa31,59■■■□□ 2,65
Trim9-208ENSMUST00000221370 Pds5bQ4VA53 1446 aaKnown RBP31,55■■■□□ 2,64
Trim9-208ENSMUST00000221370 TonslQ6NZL6 1363 aa31,54■■■□□ 2,64
Trim9-208ENSMUST00000221370 Arhgap35Q91YM2 1499 aa31,52■■■□□ 2,64
Trim9-208ENSMUST00000221370 NrkQ9R0G8 1455 aa31,5■■■□□ 2,63
Trim9-208ENSMUST00000221370 Plekhg3Q4VAC9 1341 aa31,43■■■□□ 2,62
Trim9-208ENSMUST00000221370 Cdk11bP24788 784 aaKnown RBP31,39■■■□□ 2,62
Trim9-208ENSMUST00000221370 Lamc3Q9R0B6 1581 aa31,39■■■□□ 2,62
Trim9-208ENSMUST00000221370 Eea1Q8BL66 1411 aa31,38■■■□□ 2,61
Trim9-208ENSMUST00000221370 Nop58Q6DFW4 536 aaKnown RBP31,35■■■□□ 2,61
Trim9-208ENSMUST00000221370 PtprkP35822 1457 aa31,34■■■□□ 2,61
Trim9-208ENSMUST00000221370 Wdr62Q3U3T8 1523 aa31,33■■■□□ 2,61
Trim9-208ENSMUST00000221370 Frmpd1A2AKB4 1549 aa31,33■■■□□ 2,61
Trim9-208ENSMUST00000221370 Arap1Q4LDD4 1452 aa31,32■■■□□ 2,6
Trim9-208ENSMUST00000221370 Ccdc18Q640L5 1455 aa31,31■■■□□ 2,6
Trim9-208ENSMUST00000221370 Map3k1P53349 1493 aa31,31■■■□□ 2,6
Trim9-208ENSMUST00000221370 Arhgef5E9Q7D5 1581 aa31,27■■■□□ 2,6
Trim9-208ENSMUST00000221370 Shroom4Q1W617 1475 aa31,26■■■□□ 2,59
Trim9-208ENSMUST00000221370 Kdm5bQ80Y84 1544 aa31,2■■■□□ 2,58
Trim9-208ENSMUST00000221370 Camsap1A2AHC3 1581 aa31,16■■■□□ 2,58
Trim9-208ENSMUST00000221370 Csrnp3P59055 597 aa31,14■■■□□ 2,58
Trim9-208ENSMUST00000221370 Setd5Q5XJV7 1441 aa31,14■■■□□ 2,57
Trim9-208ENSMUST00000221370 1700123L14RikQ3V2K7 440 aa31,13■■■□□ 2,57
Trim9-208ENSMUST00000221370 Kif15Q6P9L6 1387 aa31,09■■■□□ 2,57
Trim9-208ENSMUST00000221370 TchhA0A0B4J1F9 1599 aa31,08■■■□□ 2,57
Trim9-208ENSMUST00000221370 Tiam1Q60610 1591 aa31,07■■■□□ 2,56
Trim9-208ENSMUST00000221370 Erich3F6QRE9 1637 aa31,01■■■□□ 2,55
Trim9-208ENSMUST00000221370 Mroh2bQ7M6Y6 1581 aa30,99■■■□□ 2,55
Trim9-208ENSMUST00000221370 Grin2bQ01097 1482 aa30,98■■■□□ 2,55
Trim9-208ENSMUST00000221370 Ercc6F8VPZ5 1481 aa30,97■■■□□ 2,55
Trim9-208ENSMUST00000221370 Aplp2Q06335 707 aa30,97■■■□□ 2,55
Trim9-208ENSMUST00000221370 Ppargc1bQ8VHJ7 1014 aa30,97■■■□□ 2,55
Trim9-208ENSMUST00000221370 Unc13aQ4KUS2 1712 aa30,96■■■□□ 2,55
Trim9-208ENSMUST00000221370 AqrQ8CFQ3 1481 aaKnown RBP30,93■■■□□ 2,54
Trim9-208ENSMUST00000221370 Naip1Q9QWK5 1403 aa30,91■■■□□ 2,54
Trim9-208ENSMUST00000221370 Il27Q8K3I6 234 aa30,91■■■□□ 2,54
Retrieved 100 of 22,080 RNA–protein pairs in 9,5 ms