RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Hrct1Q9D6B9 109 aa13.67□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Plac1Q9JI83 173 aa13.67□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Bahcc1Q3UHR0 2643 aa13.67□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Gm37988J3QM41 62 aa13.67□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Hint1P70349 126 aaKnown RBP13.67□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Polr2kQ63871 58 aa13.67□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Ighv1-58A0A075B5W9 117 aa13.66□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 AI854703Q8BIN3 203 aa13.66□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Gtf2h5Q8K2X8 71 aa13.66□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Igkv4-62A0A0G2JDW9 117 aa13.66□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Fam240aJ3QNP9 97 aa13.66□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Slamf6Q9ET39 351 aa13.66□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 P01812 117 aa13.65□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Gm1553Q66VB7 94 aa13.65□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Krtap26-1Q9D7N2 215 aa13.65□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 CubnQ9JLB4 3623 aa13.65□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Bri3P28662 125 aa13.64□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Foxi2Q3I5G5 311 aa13.64□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Usp9xP70398 2559 aaKnown RBP13.64□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Ighv1-66A0A075B5X5 117 aa13.64□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Gm2564F6Z9S8 108 aa13.64□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Uqcrfs1Q9CR68 274 aa13.64□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Cby1Q9D1C2 127 aa13.64□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 P01726 129 aa13.63□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 1500011B03RikQ3TTH7 73 aa13.63□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 AY761184Q9D848 116 aa13.63□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Znf580Q9DB38 172 aa13.63□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Vamp8O70404 101 aa13.63□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Cyyr1Q8VIH7 165 aa13.63□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Prss29Q99MS4 279 aa13.63□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Q9D8Q6 235 aa13.63□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Rbmxl2Q9DAE2 385 aaKnown RBP13.63□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Defa37K9J724 93 aa13.62□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Defa5P28312 93 aa13.62□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Zfyve26Q5DU37 2529 aa13.62□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Cited2O35740 269 aa13.62□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Mllt11P97783 90 aa13.62□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Gm21370Q3T9V6 190 aa13.62□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 BC025920Q3US60 128 aa13.62□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Trav9-2A0A075B647 113 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Trav9-4A0A0B4J1K2 113 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Gm21994F6T2D2 329 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Fam222aQ6PGH4 453 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Lyzl4Q9D925 145 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Iah1Q9DB29 249 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Nav3Q80TN7 2359 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Ighv2-7A0A075B5Q8 116 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Ighv2-3A0A075B696 115 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Lgals6O54891 301 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 F11rO88792 300 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Pgpep1Q9ESW8 209 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Nf1Q04690 2841 aa13.61□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Gm10295Q8CCF3 114 aa13.6□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 AamdcQ8R0P4 122 aa13.6□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Klk7Q91VE3 249 aa13.6□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Gm29666A0A087WQ99 126 aa13.6□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Defa3P28310 93 aa13.6□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Defa10P50708 93 aa13.6□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Defa15P50713 93 aa13.6□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Triap1Q9D8Z2 76 aa13.6□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Defa24Q5G865 93 aa13.59□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 BatfO35284 125 aa13.59□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 P01802 115 aa13.59□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 FcorP0DJI6 106 aa13.59□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Klk5Q9D140 293 aa13.59□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Gm17455G3UW87 128 aa13.58□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Pglyrp1O88593 182 aa13.58□□□□□ -0.23
Ccdc3-201ENSMUST00000027988 Muc2Q80Z19 2680 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Ighv1-52A0A0A6YXC3 117 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Rpl36-ps4A0A140T8U4 117 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 1810032O08RikE9PZV8 113 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 S100a8P27005 89 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Lrcol1Q3URS3 161 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Trav2Q5R1I9 109 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Xirp2Q4U4S6 3784 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Ighv14-1A0A075B5R4 117 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Ccl25O35903 144 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Samd5Q3V1H9 173 aa13.57□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Gm17732E9Q5I2 61 aa13.56□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Ankrd39Q9D2X0 183 aa13.56□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Tep1P97499 2629 aa13.56□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Gm20499D3Z4G5 72 aa13.56□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Ovol2Q8CIV7 274 aa13.56□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Tspan13Q9D8C2 204 aa13.56□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Ube2d1P61080 147 aaKnown RBP13.55□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Trbv16A0A0B4J1H3 115 aa13.55□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 OdaphJ3QNT8 126 aa13.55□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Nat8b-psE0CYC6 232 aa13.54□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 P01753 117 aa13.54□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Rpl32P62911 135 aaKnown RBP13.54□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Ndufs7Q9DC70 224 aa13.54□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Chd6A3KFM7 2711 aa13.54□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Gm11565A2A4M7 156 aa13.54□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Esp4A8R0T8 117 aa13.54□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 AngP21570 145 aa13.54□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Cysltr1Q99JA4 352 aa13.54□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Tmem238A9JSM3 176 aa13.53□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Gm21748Q3UE70 102 aa13.53□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Ighv1-63A0A075B5X2 117 aa13.53□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Pcp4P63054 62 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 92.4 ms