RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Spag11Q8K4N2 71 aa8.47□□□□□ -1.05
Vps54-201ENSMUST00000006221 Plac1Q9JI83 173 aa8.47□□□□□ -1.05
Vps54-201ENSMUST00000006221 Gm17430F6RSK3 157 aa8.47□□□□□ -1.05
Vps54-201ENSMUST00000006221 Fam240aJ3QNP9 97 aa8.46□□□□□ -1.05
Vps54-201ENSMUST00000006221 Defa37K9J724 93 aa8.46□□□□□ -1.05
Vps54-201ENSMUST00000006221 Defa5P28312 93 aa8.46□□□□□ -1.05
Vps54-201ENSMUST00000006221 Atp6v0bQ91V37 205 aa8.46□□□□□ -1.05
Vps54-201ENSMUST00000006221 Rbmxl2Q9DAE2 385 aaKnown RBP8.46□□□□□ -1.06
Vps54-201ENSMUST00000006221 P04219 140 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Defa24Q5G865 93 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Ndufb4Q9CQC7 129 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Trbv17A0A140T8P8 114 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Gm9925F6T2U3 160 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 P01812 117 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 S100a8P27005 89 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Muc2Q80Z19 2680 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Chd6A3KFM7 2711 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Ighv12-3A0A075B5T1 117 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Ighv1-12A0A0A6YXJ9 117 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Defa3P28310 93 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Defa10P50708 93 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Defa15P50713 93 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Gm1553Q66VB7 94 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Clec5aQ9R007 190 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Usmg5Q78IK2 58 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Gphb5Q812B2 130 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Prss29Q99MS4 279 aa8.45□□□□□ -1.06
Vps54-201ENSMUST00000006221 Vamp8O70404 101 aa8.44□□□□□ -1.06
Vps54-201ENSMUST00000006221 Pgpep1Q9ESW8 209 aa8.44□□□□□ -1.06
Vps54-201ENSMUST00000006221 Foxi2Q3I5G5 311 aa8.44□□□□□ -1.06
Vps54-201ENSMUST00000006221 Polr2kQ63871 58 aa8.44□□□□□ -1.06
Vps54-201ENSMUST00000006221 Helz2E9QAM5 2947 aaKnown RBP8.44□□□□□ -1.06
Vps54-201ENSMUST00000006221 Gm10226O88253 85 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 Gm2564F6Z9S8 108 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 P01726 129 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 AamdcQ8R0P4 122 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 Uqcrfs1Q9CR68 274 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 Q9D8Q6 235 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 Xirp2Q4U4S6 3784 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 Gm21370Q3T9V6 190 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 Tmem238A9JSM3 176 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 Mllt11P97783 90 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 Triap1Q9D8Z2 76 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 Tep1P97499 2629 aa8.43□□□□□ -1.06
Vps54-201ENSMUST00000006221 Ighv1-66A0A075B5X5 117 aa8.42□□□□□ -1.06
Vps54-201ENSMUST00000006221 AY761184Q9D848 116 aa8.42□□□□□ -1.06
Vps54-201ENSMUST00000006221 Lgals6O54891 301 aa8.42□□□□□ -1.06
Vps54-201ENSMUST00000006221 1500011B03RikQ3TTH7 73 aa8.42□□□□□ -1.06
Vps54-201ENSMUST00000006221 Gm10295Q8CCF3 114 aa8.42□□□□□ -1.06
Vps54-201ENSMUST00000006221 Klk5Q9D140 293 aa8.42□□□□□ -1.06
Vps54-201ENSMUST00000006221 Lyzl4Q9D925 145 aa8.42□□□□□ -1.06
Vps54-201ENSMUST00000006221 Igkv4-62A0A0G2JDW9 117 aa8.41□□□□□ -1.06
Vps54-201ENSMUST00000006221 Ccl25O35903 144 aa8.41□□□□□ -1.06
Vps54-201ENSMUST00000006221 F11rO88792 300 aa8.41□□□□□ -1.06
Vps54-201ENSMUST00000006221 Iah1Q9DB29 249 aa8.41□□□□□ -1.06
Vps54-201ENSMUST00000006221 Esp4A8R0T8 117 aa8.41□□□□□ -1.06
Vps54-201ENSMUST00000006221 AI854703Q8BIN3 203 aa8.41□□□□□ -1.06
Vps54-201ENSMUST00000006221 Klk7Q91VE3 249 aa8.41□□□□□ -1.06
Vps54-201ENSMUST00000006221 Ighv1-58A0A075B5W9 117 aa8.41□□□□□ -1.06
Vps54-201ENSMUST00000006221 Insl3O09107 122 aa8.41□□□□□ -1.06
Vps54-201ENSMUST00000006221 Gm29666A0A087WQ99 126 aa8.4□□□□□ -1.06
Vps54-201ENSMUST00000006221 BC025920Q3US60 128 aa8.4□□□□□ -1.06
Vps54-201ENSMUST00000006221 Rpl36-ps4A0A140T8U4 117 aa8.4□□□□□ -1.06
Vps54-201ENSMUST00000006221 Sigmar1O55242 223 aa8.4□□□□□ -1.06
Vps54-201ENSMUST00000006221 Trav9-2A0A075B647 113 aa8.4□□□□□ -1.06
Vps54-201ENSMUST00000006221 Trav9-4A0A0B4J1K2 113 aa8.4□□□□□ -1.06
Vps54-201ENSMUST00000006221 FcorP0DJI6 106 aa8.4□□□□□ -1.06
Vps54-201ENSMUST00000006221 Ovol2Q8CIV7 274 aa8.4□□□□□ -1.06
Vps54-201ENSMUST00000006221 Nat8b-psE0CYC6 232 aa8.4□□□□□ -1.07
Vps54-201ENSMUST00000006221 Cd69P37217 199 aa8.4□□□□□ -1.07
Vps54-201ENSMUST00000006221 Krtap26-1Q9D7N2 215 aa8.4□□□□□ -1.07
Vps54-201ENSMUST00000006221 Tspan13Q9D8C2 204 aa8.4□□□□□ -1.07
Vps54-201ENSMUST00000006221 Tnfrsf23Q9ER63 176 aa8.4□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ighv2-7A0A075B5Q8 116 aa8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 Gm37988J3QM41 62 aa8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ube2d1P61080 147 aaKnown RBP8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 Fam222aQ6PGH4 453 aa8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ighv2-3A0A075B696 115 aa8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 Pglyrp1O88593 182 aa8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 Bri3P28662 125 aa8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 Q5BN45 167 aa8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 Srsf9Q9D0B0 222 aaKnown RBP8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ankrd39Q9D2X0 183 aa8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 Znf580Q9DB38 172 aa8.39□□□□□ -1.07
Vps54-201ENSMUST00000006221 P01802 115 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 Cyyr1Q8VIH7 165 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 Notch3Q61982 2318 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 Gm17732E9Q5I2 61 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 Gm21994F6T2D2 329 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 OdaphJ3QNT8 126 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 Cysltr1Q99JA4 352 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 Cited2O35740 269 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 LbhQ9CX60 105 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ighv8-12A0A0G2JDE1 119 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 Gm21748Q3UE70 102 aa8.38□□□□□ -1.07
Vps54-201ENSMUST00000006221 BC067074F6RXI4 2391 aa8.37□□□□□ -1.07
Vps54-201ENSMUST00000006221 1810032O08RikE9PZV8 113 aa8.37□□□□□ -1.07
Vps54-201ENSMUST00000006221 NrepQ07475 68 aa8.37□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ighv14-1A0A075B5R4 117 aa8.37□□□□□ -1.07
Vps54-201ENSMUST00000006221 Pdzd2E9Q1M1 2796 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 81.8 ms