RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C IXR1P33417 597 aa5.42□□□□□ -1.54
RAT1YOR048C TIF3P34167 436 aaKnown RBP5.42□□□□□ -1.54
RAT1YOR048C DBP7P36120 742 aaKnown RBP5.42□□□□□ -1.54
RAT1YOR048C YHR131CP38835 850 aa5.42□□□□□ -1.54
RAT1YOR048C SHC1P39000 512 aa5.42□□□□□ -1.54
RAT1YOR048C ASN2P49090 572 aaKnown RBP5.42□□□□□ -1.54
RAT1YOR048C AZR1P50080 613 aa5.42□□□□□ -1.54
RAT1YOR048C ALT1P52893 592 aa5.42□□□□□ -1.54
RAT1YOR048C FMP30Q02883 468 aa5.42□□□□□ -1.54
RAT1YOR048C CRN1Q06440 651 aa5.42□□□□□ -1.54
RAT1YOR048C CUR1Q06469 252 aa5.42□□□□□ -1.54
RAT1YOR048C AIM39Q08223 395 aa5.42□□□□□ -1.54
RAT1YOR048C YOL159CQ08300 171 aa5.42□□□□□ -1.54
RAT1YOR048C SLD7Q08457 257 aa5.42□□□□□ -1.54
RAT1YOR048C COX6P00427 148 aa5.42□□□□□ -1.54
RAT1YOR048C COX4P04037 155 aa5.42□□□□□ -1.54
RAT1YOR048C CTT1P06115 562 aa5.42□□□□□ -1.54
RAT1YOR048C CHS1P08004 1131 aa5.42□□□□□ -1.54
RAT1YOR048C URA10P30402 227 aa5.42□□□□□ -1.54
RAT1YOR048C MRP4P32902 394 aa5.42□□□□□ -1.54
RAT1YOR048C TVP38P36164 337 aa5.42□□□□□ -1.54
RAT1YOR048C YBR138CP38277 524 aa5.42□□□□□ -1.54
RAT1YOR048C FRT2P39734 528 aa5.42□□□□□ -1.54
RAT1YOR048C CCT8P47079 568 aaKnown RBP5.42□□□□□ -1.54
RAT1YOR048C SMP3Q04174 516 aa5.42□□□□□ -1.54
RAT1YOR048C ATG20Q07528 640 aa5.42□□□□□ -1.54
RAT1YOR048C DIS3Q08162 1001 aaKnown RBP5.42□□□□□ -1.54
RAT1YOR048C YPR027CQ12079 277 aa5.42□□□□□ -1.54
RAT1YOR048C APM4Q99186 491 aa5.42□□□□□ -1.54
RAT1YOR048C YUR1P26725 428 aa5.42□□□□□ -1.54
RAT1YOR048C YBL029WP38201 376 aa5.42□□□□□ -1.54
RAT1YOR048C ATG12P38316 186 aa5.42□□□□□ -1.54
RAT1YOR048C YRB2P40517 327 aa5.42□□□□□ -1.54
RAT1YOR048C IRC6P43615 237 aa5.42□□□□□ -1.54
RAT1YOR048C NHX1Q04121 633 aa5.42□□□□□ -1.54
RAT1YOR048C SXM1Q04175 944 aaKnown RBP5.42□□□□□ -1.54
RAT1YOR048C CDA1Q06702 301 aa5.42□□□□□ -1.54
RAT1YOR048C YOR342CQ12182 319 aa5.42□□□□□ -1.54
RAT1YOR048C GPM3Q12326 303 aa5.42□□□□□ -1.54
RAT1YOR048C AVL9Q12500 764 aa5.42□□□□□ -1.54
RAT1YOR048C GLN4P13188 809 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C SEC15P22224 910 aa5.41□□□□□ -1.54
RAT1YOR048C BEM1P29366 551 aa5.41□□□□□ -1.54
RAT1YOR048C PTP2P29461 750 aa5.41□□□□□ -1.54
RAT1YOR048C SAC1P32368 623 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C TFB1P32776 642 aa5.41□□□□□ -1.54
RAT1YOR048C TRF5P48561 642 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C PSP2P50109 593 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C MIG2P53035 382 aa5.41□□□□□ -1.54
RAT1YOR048C RPL22BP56628 122 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C TIM11P81449 96 aaPredicted RBP5.41□□□□□ -1.54
RAT1YOR048C YMR099CQ03161 297 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C TVP15Q03860 143 aa5.41□□□□□ -1.54
RAT1YOR048C TIF35Q04067 274 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C DTD1Q07648 150 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C CUE5Q08412 411 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C THI21Q08975 551 aa5.41□□□□□ -1.54
RAT1YOR048C RGS2Q99188 309 aa5.41□□□□□ -1.54
RAT1YOR048C ATP2P00830 511 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C TRP3P00937 484 aa5.41□□□□□ -1.54
RAT1YOR048C CIT2P08679 460 aa5.41□□□□□ -1.54
RAT1YOR048C URA4P20051 364 aa5.41□□□□□ -1.54
RAT1YOR048C TSR4P25040 408 aa5.41□□□□□ -1.54
RAT1YOR048C TBS1P38114 1094 aa5.41□□□□□ -1.54
RAT1YOR048C YEL025CP39991 1188 aa5.41□□□□□ -1.54
RAT1YOR048C ARB1P40024 610 aaKnown RBP5.41□□□□□ -1.54
RAT1YOR048C YNL058CP53947 316 aa5.41□□□□□ -1.54
RAT1YOR048C MSH6Q03834 1242 aa5.41□□□□□ -1.54
RAT1YOR048C SPC2Q04969 178 aa5.41□□□□□ -1.54
RAT1YOR048C SWA2Q06677 668 aa5.41□□□□□ -1.54
RAT1YOR048C YPL247CQ12523 523 aa5.41□□□□□ -1.54
RAT1YOR048C RHO1P06780 209 aaKnown RBP5.4□□□□□ -1.54
RAT1YOR048C PUT2P07275 575 aa5.4□□□□□ -1.54
RAT1YOR048C SNF4P12904 322 aa5.4□□□□□ -1.54
RAT1YOR048C PRP6P19735 899 aaPredicted RBP5.4□□□□□ -1.54
RAT1YOR048C MEI5P32489 222 aa5.4□□□□□ -1.54
RAT1YOR048C SPT16P32558 1035 aaKnown RBP5.4□□□□□ -1.54
RAT1YOR048C YBR056WP38081 501 aa5.4□□□□□ -1.54
RAT1YOR048C RIM11P38615 370 aa5.4□□□□□ -1.54
RAT1YOR048C UBP7P40453 1071 aa5.4□□□□□ -1.54
RAT1YOR048C IRR1P40541 1150 aa5.4□□□□□ -1.54
RAT1YOR048C INP51P40559 946 aaKnown RBP5.4□□□□□ -1.54
RAT1YOR048C GCN20P43535 752 aaKnown RBP5.4□□□□□ -1.54
RAT1YOR048C PFD1P46988 109 aa5.4□□□□□ -1.54
RAT1YOR048C TAF12Q03761 539 aa5.4□□□□□ -1.54
RAT1YOR048C ARP9Q05123 467 aa5.4□□□□□ -1.54
RAT1YOR048C NDL1Q06568 189 aa5.4□□□□□ -1.54
RAT1YOR048C SUB2Q07478 446 aaKnown RBP5.4□□□□□ -1.54
RAT1YOR048C HUA2Q12134 243 aa5.4□□□□□ -1.54
RAT1YOR048C UPC2Q12151 913 aa5.4□□□□□ -1.54
RAT1YOR048C NOT5Q12514 560 aaPredicted RBP5.4□□□□□ -1.54
RAT1YOR048C PRC1P00729 532 aa5.4□□□□□ -1.55
RAT1YOR048C IMA3P0CW40 589 aa5.4□□□□□ -1.55
RAT1YOR048C IMA4P0CW41 589 aa5.4□□□□□ -1.55
RAT1YOR048C ERR1P0CX10 437 aa5.4□□□□□ -1.55
RAT1YOR048C ERR2P0CX11 437 aa5.4□□□□□ -1.55
RAT1YOR048C KAP104P38217 918 aaKnown RBP5.4□□□□□ -1.55
RAT1YOR048C SRP68P38687 599 aaKnown RBP5.4□□□□□ -1.55
RAT1YOR048C YHI9P38765 294 aa5.4□□□□□ -1.55
RAT1YOR048C PPE1P38796 400 aa5.4□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms