RNA–Protein interactions for RNA: YNL294C

RIM21, Transcript of pH sensor molecule, component of the RIM101 pathway, yeast

Gene RIM21, Length 1,602 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM21	YNL294C	TAF10	Q12030	206 aa		4.56	□□□□□ -1.68
RIM21	YNL294C	RTR2	Q12378	196 aa		4.56	□□□□□ -1.68
RIM21	YNL294C	RMP1	Q12530	201 aa		4.56	□□□□□ -1.68
RIM21	YNL294C	MDS3	P53094	1487 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
RIM21	YNL294C	GAL1	P04385	528 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	HXK1	P04806	485 aa	Known RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	RPL6B	P05739	176 aa	Known RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	RAD57	P25301	460 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	MVD1	P32377	396 aa	Known RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	ASF2	P32448	525 aa	Predicted RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	DOA4	P32571	926 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	KAP104	P38217	918 aa	Known RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	YAP3	P38749	330 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	MTG2	P38860	518 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	CCC2	P38995	1004 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	NPT1	P39683	429 aa	Known RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	TIF4631	P39935	952 aa	Known RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	ALD5	P40047	520 aa	Known RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	RTR1	P40084	226 aa	Predicted RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	YJR061W	P40355	935 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	RTS2	P40962	232 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	RGD2	P43556	714 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	YJL055W	P47044	245 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	RET3	P53600	189 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	ZRG17	P53735	605 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	SVL3	Q03088	825 aa	Known RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	YMR114C	Q04471	368 aa	Known RBP	4.55	□□□□□ -1.68
RIM21	YNL294C	DAL4	Q04895	635 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	VPS38	Q05919	439 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	YPD1	Q07688	167 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	SGT1	Q08446	395 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
RIM21	YNL294C	SPO21	Q12411	609 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	YOS9	Q99220	542 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	PDR11	P40550	1411 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	YLR278C	Q05854	1341 aa		4.55	□□□□□ -1.68
RIM21	YNL294C	FOB1	O13329	566 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	STE12	P13574	688 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	MSN1	P22148	382 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	GSY2	P27472	705 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	PEP3	P27801	918 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	NTG1	P31378	399 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	MLF3	P32047	452 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	VMA6	P32366	345 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	VPH1	P32563	840 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	LRG1	P35688	1017 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	TPO5	P36029	618 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	YER130C	P39959	443 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	FIR1	P40020	876 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	SWP82	P43554	623 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	MTO1	P53070	669 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	SIW14	P53965	281 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	TMA20	P89886	181 aa	Predicted RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	VAC14	Q06708	880 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	SIL1	Q08199	421 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	VPS54	Q12071	889 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	MED2	Q12124	431 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	BAG7	Q12128	409 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	MCD1	Q12158	566 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	RIB2	Q12362	591 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	EMP46	Q12396	444 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	TIF6	Q12522	245 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	CMC2	Q3E7A4	109 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	DOP1	Q03921	1698 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	ARG81	P05085	880 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	SNF1	P06782	633 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	RIP-Chip
RIM21	YNL294C	URA1	P28272	314 aa	Predicted RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	EFT1	P32324	842 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	PPG1	P32838	368 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	RRN3	P36070	627 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	IRS4	P36115	615 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	CCZ1	P38273	704 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	YMR262W	P38430	313 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	SMF1	P38925	575 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	SEC31	P38968	1273 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	OAF1	P39720	1047 aa	Predicted RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	NOP16	P40007	231 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	SIP5	P40210	489 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	YTA12	P40341	825 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	NTA1	P40354	457 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	CAB2	P40506	365 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	BUD6	P41697	788 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	MAD3	P47074	515 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	PSP2	P50109	593 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	SAP4	P53036	818 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	OKP1	P53298	406 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	COS6	P53344	381 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	TOF1	P53840	1238 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	CNM67	P53865	581 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	IMP4	P53941	290 aa	Known RBP	4.54	□□□□□ -1.68
RIM21	YNL294C	VAC7	P53950	1165 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	MAK10	Q02197	733 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	NSE5	Q03718	556 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	GTB1	Q04924	702 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	IVY1	Q04934	453 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	YLL007C	Q07799	665 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	HUA2	Q12134	243 aa		4.54	□□□□□ -1.68
RIM21	YNL294C	TY1B-JR2	P47100	1755 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms