RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA6	YLR447C	COS12	P53053	380 aa		4.17	□□□□□ -1.74
VMA6	YLR447C	VTC3	Q02725	835 aa		4.17	□□□□□ -1.74
VMA6	YLR447C	PLM2	Q04383	521 aa		4.17	□□□□□ -1.74
VMA6	YLR447C	ARG1	P22768	420 aa		4.15	□□□□□ -1.75
VMA6	YLR447C	DAL3	P32459	195 aa		4.15	□□□□□ -1.75
VMA6	YLR447C	KES1	P35844	434 aa	Known RBP	4.15	□□□□□ -1.75
VMA6	YLR447C	TOM71	P38825	639 aa	Known RBP	4.15	□□□□□ -1.75
VMA6	YLR447C	IDS2	P46958	469 aa		4.15	□□□□□ -1.75
VMA6	YLR447C	SPC105	P53148	917 aa		4.15	□□□□□ -1.75
VMA6	YLR447C	YML119W	Q03208	357 aa		4.15	□□□□□ -1.75
VMA6	YLR447C	CWC2	Q12046	339 aa	Predicted RBP	4.15	□□□□□ -1.75
VMA6	YLR447C	RTC1	Q08281	1341 aa		4.15	□□□□□ -1.75
VMA6	YLR447C	RRP43	P25359	394 aa	Predicted RBP	4.14	□□□□□ -1.75
VMA6	YLR447C	GPP2	P40106	250 aa	Known RBP	4.14	□□□□□ -1.75
VMA6	YLR447C	MNT2	P53059	558 aa		4.14	□□□□□ -1.75
VMA6	YLR447C	GRS2	Q06817	618 aa		4.14	□□□□□ -1.75
VMA6	YLR447C	GET3	Q12154	354 aa	Known RBP	4.14	□□□□□ -1.75
VMA6	YLR447C	AMD2	P22580	549 aa		4.13	□□□□□ -1.75
VMA6	YLR447C	PET309	P32522	965 aa	Predicted RBP	4.13	□□□□□ -1.75
VMA6	YLR447C	FPR3	P38911	411 aa	Known RBP	4.13	□□□□□ -1.75
VMA6	YLR447C	SAP1	P39955	897 aa	Known RBP	4.13	□□□□□ -1.75
VMA6	YLR447C	YML053C	Q04978	212 aa		4.13	□□□□□ -1.75
VMA6	YLR447C	DSE3	Q08729	430 aa		4.13	□□□□□ -1.75
VMA6	YLR447C	LYS21	Q12122	440 aa	Known RBP	4.13	□□□□□ -1.75
VMA6	YLR447C	LCB4	Q12246	624 aa		4.13	□□□□□ -1.75
VMA6	YLR447C	URA3	P03962	267 aa		4.12	□□□□□ -1.75
VMA6	YLR447C	STB5	P38699	743 aa		4.12	□□□□□ -1.75
VMA6	YLR447C	GND1	P38720	489 aa	Known RBP	4.12	□□□□□ -1.75
VMA6	YLR447C	SLD3	P53135	668 aa		4.12	□□□□□ -1.75
VMA6	YLR447C	HOL1	P53389	586 aa		4.12	□□□□□ -1.75
VMA6	YLR447C	YDL242W	Q07746	117 aa		4.12	□□□□□ -1.75
VMA6	YLR447C	YER175W-A	Q8TGU4	54 aa		4.12	□□□□□ -1.75
VMA6	YLR447C	GAL4	P04386	881 aa		4.11	□□□□□ -1.75
VMA6	YLR447C	SSP120	P39931	234 aa	Known RBP	4.11	□□□□□ -1.75
VMA6	YLR447C	ECM22	Q05958	814 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA6	YLR447C	NDD1	Q08887	554 aa		4.11	□□□□□ -1.75
VMA6	YLR447C	YPT1	P01123	206 aa	Known RBP	4.1	□□□□□ -1.75
VMA6	YLR447C	SEC18	P18759	758 aa	Known RBP	4.1	□□□□□ -1.75
VMA6	YLR447C	KGD2	P19262	463 aa	Predicted RBP	4.1	□□□□□ -1.75
VMA6	YLR447C	STL1	P39932	569 aa		4.1	□□□□□ -1.75
VMA6	YLR447C	EAF5	P39995	279 aa		4.1	□□□□□ -1.75
VMA6	YLR447C	GSM1	P42950	618 aa		4.1	□□□□□ -1.75
VMA6	YLR447C	ORC5	P50874	479 aa		4.1	□□□□□ -1.75
VMA6	YLR447C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	RIP-Chip
VMA6	YLR447C	YNL144C	P53907	740 aa		4.1	□□□□□ -1.75
VMA6	YLR447C	RAD34	Q06665	692 aa		4.1	□□□□□ -1.75
VMA6	YLR447C	PFA4	Q12006	378 aa		4.1	□□□□□ -1.75
VMA6	YLR447C	RRI1	Q12468	440 aa		4.1	□□□□□ -1.75
VMA6	YLR447C	COX11	P19516	300 aa	Known RBP	4.09	□□□□□ -1.75
VMA6	YLR447C	EMP65	P40085	556 aa		4.09	□□□□□ -1.75
VMA6	YLR447C	YPT11	P48559	417 aa		4.09	□□□□□ -1.75
VMA6	YLR447C	YAT1	P80235	687 aa		4.09	□□□□□ -1.75
VMA6	YLR447C	YPL191C	Q08930	360 aa		4.09	□□□□□ -1.75
VMA6	YLR447C	CTT1	P06115	562 aa		4.08	□□□□□ -1.76
VMA6	YLR447C	ILV2	P07342	687 aa	Known RBP	4.08	□□□□□ -1.76
VMA6	YLR447C	CNA1	P23287	553 aa		4.08	□□□□□ -1.76
VMA6	YLR447C	YCR043C	P25361	127 aa		4.08	□□□□□ -1.76
VMA6	YLR447C	SWC3	P31376	625 aa		4.08	□□□□□ -1.76
VMA6	YLR447C	MSS51	P32335	436 aa		4.08	□□□□□ -1.76
VMA6	YLR447C	RTT107	P38850	1070 aa		4.08	□□□□□ -1.76
VMA6	YLR447C	VPS8	P39702	1274 aa		4.08	□□□□□ -1.76
VMA6	YLR447C	YIL152W	P40455	235 aa		4.08	□□□□□ -1.76
VMA6	YLR447C	YNR071C	P53757	342 aa		4.08	□□□□□ -1.76
VMA6	YLR447C	RPF2	P36160	344 aa	Known RBP	4.07	□□□□□ -1.76
VMA6	YLR447C	ARC40	P38328	384 aa	Known RBP	4.07	□□□□□ -1.76
VMA6	YLR447C	VBA2	P38358	474 aa	Known RBP	4.07	□□□□□ -1.76
VMA6	YLR447C	VFA1	P40080	203 aa		4.07	□□□□□ -1.76
VMA6	YLR447C	MAD2	P40958	196 aa		4.07	□□□□□ -1.76
VMA6	YLR447C	YJL107C	P42947	387 aa		4.07	□□□□□ -1.76
VMA6	YLR447C	NIT2	P47016	307 aa		4.07	□□□□□ -1.76
VMA6	YLR447C	TRE2	Q08693	809 aa		4.07	□□□□□ -1.76
VMA6	YLR447C	RTK1	Q12100	620 aa	Predicted RBP	4.07	□□□□□ -1.76
VMA6	YLR447C	Q0010	Q9ZZX9	128 aa		4.07	□□□□□ -1.76
VMA6	YLR447C	YCR061W	P25639	631 aa		4.06	□□□□□ -1.76
VMA6	YLR447C	SIP1	P32578	815 aa		4.06	□□□□□ -1.76
VMA6	YLR447C	ARO9	P38840	513 aa	Predicted RBP	4.06	□□□□□ -1.76
VMA6	YLR447C	MET30	P39014	640 aa		4.06	□□□□□ -1.76
VMA6	YLR447C	YIL169C	P40442	995 aa		4.06	□□□□□ -1.76
VMA6	YLR447C	TES1	P41903	349 aa	Known RBP	4.06	□□□□□ -1.76
VMA6	YLR447C	SAD1	P43589	448 aa		4.06	□□□□□ -1.76
VMA6	YLR447C	YGL260W	P53056	76 aa		4.06	□□□□□ -1.76
VMA6	YLR447C	ARA2	Q04212	335 aa		4.06	□□□□□ -1.76
VMA6	YLR447C	YMR034C	Q05131	434 aa	Predicted RBP	4.06	□□□□□ -1.76
VMA6	YLR447C	MLH2	Q07980	695 aa		4.06	□□□□□ -1.76
VMA6	YLR447C	NRT1	Q08485	598 aa		4.06	□□□□□ -1.76
VMA6	YLR447C	DIN7	Q12086	430 aa		4.06	□□□□□ -1.76
VMA6	YLR447C	SES1	P07284	462 aa	Known RBP	4.05	□□□□□ -1.76
VMA6	YLR447C	PRP45	P28004	379 aa	Predicted RBP	4.05	□□□□□ -1.76
VMA6	YLR447C	NIC96	P34077	839 aa		4.05	□□□□□ -1.76
VMA6	YLR447C	ARN1	P38731	627 aa		4.05	□□□□□ -1.76
VMA6	YLR447C	ERV46	P39727	415 aa		4.05	□□□□□ -1.76
VMA6	YLR447C	CRF1	Q04930	467 aa		4.05	□□□□□ -1.76
VMA6	YLR447C	TRI1	Q05024	226 aa		4.05	□□□□□ -1.76
VMA6	YLR447C	PEX15	Q08215	383 aa		4.05	□□□□□ -1.76
VMA6	YLR447C	PTC6	P25646	442 aa		4.04	□□□□□ -1.76
VMA6	YLR447C	PRE2	P30656	287 aa	Known RBP	4.04	□□□□□ -1.76
VMA6	YLR447C	SCW10	Q04951	389 aa		4.04	□□□□□ -1.76
VMA6	YLR447C	GSH2	Q08220	491 aa		4.04	□□□□□ -1.76
VMA6	YLR447C	TAF5	P38129	798 aa		4.03	□□□□□ -1.76
VMA6	YLR447C	VRG4	P40107	337 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms