RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A PET309P32522 965 aaPredicted RBP3.96□□□□□ -1.78
EFG1YGR271C-A IMD2P38697 523 aaKnown RBP3.96□□□□□ -1.78
EFG1YGR271C-A IMD3P50095 523 aaKnown RBP3.96□□□□□ -1.78
EFG1YGR271C-A MDR1P53258 950 aa3.96□□□□□ -1.78
EFG1YGR271C-A COG2P53271 262 aa3.96□□□□□ -1.78
EFG1YGR271C-A YML119WQ03208 357 aa3.96□□□□□ -1.78
EFG1YGR271C-A CWC2Q12046 339 aaPredicted RBP3.96□□□□□ -1.78
EFG1YGR271C-A HER1Q12276 1246 aa3.96□□□□□ -1.78
EFG1YGR271C-A COX11P19516 300 aaKnown RBP3.95□□□□□ -1.78
EFG1YGR271C-A YCR061WP25639 631 aa3.95□□□□□ -1.78
EFG1YGR271C-A HEM12P32347 362 aaPredicted RBP3.95□□□□□ -1.78
EFG1YGR271C-A TOM20P35180 183 aa3.95□□□□□ -1.78
EFG1YGR271C-A TOM71P38825 639 aaKnown RBP3.95□□□□□ -1.78
EFG1YGR271C-A STL1P39932 569 aa3.95□□□□□ -1.78
EFG1YGR271C-A CIN1P40987 1014 aa3.95□□□□□ -1.78
EFG1YGR271C-A GSM1P42950 618 aa3.95□□□□□ -1.78
EFG1YGR271C-A PUS4P48567 403 aaKnown RBP3.95□□□□□ -1.78
EFG1YGR271C-A LSC1P53598 329 aaKnown RBP3.95□□□□□ -1.78
EFG1YGR271C-A VTC3Q02725 835 aa3.95□□□□□ -1.78
EFG1YGR271C-A ARA2Q04212 335 aa3.95□□□□□ -1.78
EFG1YGR271C-A ATO2P32907 282 aa3.94□□□□□ -1.78
EFG1YGR271C-A SES1P07284 462 aaKnown RBP3.93□□□□□ -1.78
EFG1YGR271C-A EMP65P40085 556 aa3.93□□□□□ -1.78
EFG1YGR271C-A SLD3P53135 668 aa3.93□□□□□ -1.78
EFG1YGR271C-A HOL1P53389 586 aa3.93□□□□□ -1.78
EFG1YGR271C-A SNU56Q03782 492 aaKnown RBP3.93□□□□□ -1.78
EFG1YGR271C-A PLM2Q04383 521 aa3.93□□□□□ -1.78
EFG1YGR271C-A PEX15Q08215 383 aa3.93□□□□□ -1.78
EFG1YGR271C-A TRE2Q08693 809 aa3.93□□□□□ -1.78
EFG1YGR271C-A YBR071WP38243 211 aa3.92□□□□□ -1.78
EFG1YGR271C-A STB5P38699 743 aa3.92□□□□□ -1.78
EFG1YGR271C-A NAB3P38996 802 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
EFG1YGR271C-A SAP1P39955 897 aaKnown RBP3.92□□□□□ -1.78
EFG1YGR271C-A YIL152WP40455 235 aa3.92□□□□□ -1.78
EFG1YGR271C-A LYS20P48570 428 aaKnown RBP3.92□□□□□ -1.78
EFG1YGR271C-A SPC105P53148 917 aa3.92□□□□□ -1.78
EFG1YGR271C-A UBP16Q02863 499 aa3.92□□□□□ -1.78
EFG1YGR271C-A TRI1Q05024 226 aa3.92□□□□□ -1.78
EFG1YGR271C-A YDL242WQ07746 117 aa3.92□□□□□ -1.78
EFG1YGR271C-A SRL1Q08673 210 aa3.92□□□□□ -1.78
EFG1YGR271C-A PSF3Q12146 194 aa3.92□□□□□ -1.78
EFG1YGR271C-A HOS1Q12214 470 aa3.92□□□□□ -1.78
EFG1YGR271C-A RTC1Q08281 1341 aa3.92□□□□□ -1.78
EFG1YGR271C-A GAL4P04386 881 aa3.91□□□□□ -1.78
EFG1YGR271C-A ILS1P09436 1072 aaKnown RBP3.91□□□□□ -1.78
EFG1YGR271C-A ARO9P38840 513 aaPredicted RBP3.91□□□□□ -1.78
EFG1YGR271C-A ERV46P39727 415 aa3.91□□□□□ -1.78
EFG1YGR271C-A ENT2Q05785 613 aa3.91□□□□□ -1.78
EFG1YGR271C-A SLX4Q12098 748 aa3.91□□□□□ -1.78
EFG1YGR271C-A DBP10Q12389 995 aaKnown RBP3.91□□□□□ -1.78
EFG1YGR271C-A SSB1P11484 613 aaKnown RBP3.9□□□□□ -1.79
EFG1YGR271C-A SSB2P40150 613 aaKnown RBP3.9□□□□□ -1.79
EFG1YGR271C-A IDS2P46958 469 aa3.9□□□□□ -1.79
EFG1YGR271C-A MDV1P47025 714 aa3.9□□□□□ -1.79
EFG1YGR271C-A TRS31Q03337 283 aa3.9□□□□□ -1.79
EFG1YGR271C-A ECM38Q05902 660 aaPredicted RBP3.9□□□□□ -1.79
EFG1YGR271C-A BUD7Q08754 746 aa3.9□□□□□ -1.79
EFG1YGR271C-A ENP1P38333 483 aaKnown RBP3.89□□□□□ -1.79
EFG1YGR271C-A UBP7P40453 1071 aa3.89□□□□□ -1.79
EFG1YGR271C-A COG6P53959 839 aa3.89□□□□□ -1.79
EFG1YGR271C-A BUD21Q08492 214 aaPredicted RBP3.89□□□□□ -1.79
EFG1YGR271C-A YPL191CQ08930 360 aa3.89□□□□□ -1.79
EFG1YGR271C-A NEW1Q08972 1196 aaKnown RBP3.89□□□□□ -1.79
EFG1YGR271C-A ATX2Q12067 313 aa3.89□□□□□ -1.79
EFG1YGR271C-A GSH1P32477 678 aa3.88□□□□□ -1.79
EFG1YGR271C-A GND1P38720 489 aaKnown RBP3.88□□□□□ -1.79
EFG1YGR271C-A YLF2P38746 405 aa3.88□□□□□ -1.79
EFG1YGR271C-A MTG2P38860 518 aa3.88□□□□□ -1.79
EFG1YGR271C-A YAT1P80235 687 aa3.88□□□□□ -1.79
EFG1YGR271C-A YER175W-AQ8TGU4 54 aa3.88□□□□□ -1.79
EFG1YGR271C-A PRE2P30656 287 aaKnown RBP3.87□□□□□ -1.79
EFG1YGR271C-A RPT3P33298 428 aaKnown RBP3.87□□□□□ -1.79
EFG1YGR271C-A VBA2P38358 474 aaKnown RBP3.87□□□□□ -1.79
EFG1YGR271C-A ERC1P38767 581 aa3.87□□□□□ -1.79
EFG1YGR271C-A FLO5P38894 1075 aa3.87□□□□□ -1.79
EFG1YGR271C-A TPM2P40414 161 aa3.87□□□□□ -1.79
EFG1YGR271C-A YJL107CP42947 387 aa3.87□□□□□ -1.79
EFG1YGR271C-A POL31P46957 487 aa3.87□□□□□ -1.79
EFG1YGR271C-A YML053CQ04978 212 aa3.87□□□□□ -1.79
EFG1YGR271C-A PFA4Q12006 378 aa3.87□□□□□ -1.79
EFG1YGR271C-A UBX3Q12229 455 aa3.87□□□□□ -1.79
EFG1YGR271C-A CNA1P23287 553 aa3.86□□□□□ -1.79
EFG1YGR271C-A GRX4P32642 244 aa3.86□□□□□ -1.79
EFG1YGR271C-A GCS1P35197 352 aa3.86□□□□□ -1.79
EFG1YGR271C-A PAF1P38351 445 aa3.86□□□□□ -1.79
EFG1YGR271C-A MAF1P41910 395 aa3.86□□□□□ -1.79
EFG1YGR271C-A ACS1Q01574 713 aa3.86□□□□□ -1.79
EFG1YGR271C-A MLH2Q07980 695 aa3.86□□□□□ -1.79
EFG1YGR271C-A DSE3Q08729 430 aa3.86□□□□□ -1.79
EFG1YGR271C-A NDD1Q08887 554 aa3.86□□□□□ -1.79
EFG1YGR271C-A TMA17Q12513 150 aa3.86□□□□□ -1.79
EFG1YGR271C-A YBR255C-AQ3E776 120 aa3.86□□□□□ -1.79
EFG1YGR271C-A ARB1P40024 610 aaKnown RBP3.85□□□□□ -1.79
EFG1YGR271C-A YEN1P40028 759 aa3.85□□□□□ -1.79
EFG1YGR271C-A VFA1P40080 203 aa3.85□□□□□ -1.79
EFG1YGR271C-A EAF7P53911 425 aaKnown RBP3.85□□□□□ -1.79
EFG1YGR271C-A BOP3P53958 396 aa3.85□□□□□ -1.79
EFG1YGR271C-A SNA4Q07549 140 aa3.85□□□□□ -1.79
EFG1YGR271C-A YOR111WQ99210 232 aa3.85□□□□□ -1.79
EFG1YGR271C-A TGL1P34163 548 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms