RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W BUD27P43573 796 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
PTR3YFR029W NIT3P49954 291 aa4.33□□□□□ -1.72
PTR3YFR029W YNR071CP53757 342 aa4.33□□□□□ -1.72
PTR3YFR029W PDR16P53860 351 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W HDA1P53973 706 aa4.33□□□□□ -1.72
PTR3YFR029W THI21Q08975 551 aa4.33□□□□□ -1.72
PTR3YFR029W ADF1Q2V2Q1 113 aa4.33□□□□□ -1.72
PTR3YFR029W YOR019WQ99248 730 aa4.33□□□□□ -1.72
PTR3YFR029W RPP1AP05318 106 aaPredicted RBP4.32□□□□□ -1.72
PTR3YFR029W ERS1P17261 260 aa4.32□□□□□ -1.72
PTR3YFR029W MDH1P17505 334 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
PTR3YFR029W RIT1P23796 513 aa4.32□□□□□ -1.72
PTR3YFR029W SRP101P32916 621 aa4.32□□□□□ -1.72
PTR3YFR029W MRPL40P36534 297 aa4.32□□□□□ -1.72
PTR3YFR029W CCL1P37366 393 aa4.32□□□□□ -1.72
PTR3YFR029W MMS4P38257 691 aa4.32□□□□□ -1.72
PTR3YFR029W TIF5P38431 405 aaKnown RBP4.32□□□□□ -1.72
PTR3YFR029W ALD5P40047 520 aaKnown RBP4.32□□□□□ -1.72
PTR3YFR029W MET18P40469 1032 aa4.32□□□□□ -1.72
PTR3YFR029W PRM2P40534 656 aa4.32□□□□□ -1.72
PTR3YFR029W GCV2P49095 1034 aa4.32□□□□□ -1.72
PTR3YFR029W MNT2P53059 558 aa4.32□□□□□ -1.72
PTR3YFR029W HOP2P53187 214 aa4.32□□□□□ -1.72
PTR3YFR029W BRE5P53741 515 aaKnown RBP4.32□□□□□ -1.72
PTR3YFR029W RCL1Q08096 367 aaPredicted RBP4.32□□□□□ -1.72
PTR3YFR029W SKM1Q12469 655 aa4.32□□□□□ -1.72
PTR3YFR029W YRF1-4O13559 1382 aa4.31□□□□□ -1.72
PTR3YFR029W CET1O13297 549 aaPredicted RBP4.31□□□□□ -1.72
PTR3YFR029W SEC53P07283 254 aaKnown RBP4.31□□□□□ -1.72
PTR3YFR029W CBS1P14066 229 aa4.31□□□□□ -1.72
PTR3YFR029W GRR1P24814 1151 aa4.31□□□□□ -1.72
PTR3YFR029W MSP1P28737 362 aa4.31□□□□□ -1.72
PTR3YFR029W MDL2P33311 773 aa4.31□□□□□ -1.72
PTR3YFR029W YDR089WP38966 869 aa4.31□□□□□ -1.72
PTR3YFR029W NCS6P53088 359 aa4.31□□□□□ -1.72
PTR3YFR029W LSC2P53312 427 aa4.31□□□□□ -1.72
PTR3YFR029W SOK2P53438 785 aaPredicted RBP4.31□□□□□ -1.72
PTR3YFR029W YNL050CP53952 270 aa4.31□□□□□ -1.72
PTR3YFR029W ACS1Q01574 713 aa4.31□□□□□ -1.72
PTR3YFR029W INP2Q03824 705 aa4.31□□□□□ -1.72
PTR3YFR029W RAD30Q04049 632 aa4.31□□□□□ -1.72
PTR3YFR029W YLR407WQ06070 228 aa4.31□□□□□ -1.72
PTR3YFR029W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
PTR3YFR029W COX17Q12287 69 aa4.31□□□□□ -1.72
PTR3YFR029W ZRT2Q12436 422 aa4.31□□□□□ -1.72
PTR3YFR029W YBR126W-AQ8TGU7 68 aa4.31□□□□□ -1.72
PTR3YFR029W ARG80P07249 177 aa4.31□□□□□ -1.72
PTR3YFR029W RPB2P08518 1224 aaKnown RBP4.31□□□□□ -1.72
PTR3YFR029W PUT4P15380 627 aa4.31□□□□□ -1.72
PTR3YFR029W YJU2P28320 278 aaPredicted RBP4.31□□□□□ -1.72
PTR3YFR029W RRM3P38766 723 aa4.31□□□□□ -1.72
PTR3YFR029W SPT8P38915 602 aa4.31□□□□□ -1.72
PTR3YFR029W AIM10P39965 576 aaKnown RBP4.31□□□□□ -1.72
PTR3YFR029W YJL045WP47052 634 aa4.31□□□□□ -1.72
PTR3YFR029W OGG1P53397 376 aaPredicted RBP4.31□□□□□ -1.72
PTR3YFR029W RPN7Q06103 429 aaKnown RBP4.31□□□□□ -1.72
PTR3YFR029W YPS7Q06325 596 aa4.31□□□□□ -1.72
PTR3YFR029W YOR111WQ99210 232 aa4.31□□□□□ -1.72
PTR3YFR029W PRB1P09232 635 aa4.3□□□□□ -1.72
PTR3YFR029W CAD1P24813 409 aaKnown RBP4.3□□□□□ -1.72
PTR3YFR029W PHO91P27514 894 aa4.3□□□□□ -1.72
PTR3YFR029W DPH5P32469 300 aaPredicted RBP4.3□□□□□ -1.72
PTR3YFR029W DOA4P32571 926 aa4.3□□□□□ -1.72
PTR3YFR029W MRP4P32902 394 aa4.3□□□□□ -1.72
PTR3YFR029W NTC20P38302 140 aaPredicted RBP4.3□□□□□ -1.72
PTR3YFR029W YJL070CP40361 888 aa4.3□□□□□ -1.72
PTR3YFR029W INA22P40576 216 aa4.3□□□□□ -1.72
PTR3YFR029W SSU1P41930 458 aa4.3□□□□□ -1.72
PTR3YFR029W ALT2P52892 507 aa4.3□□□□□ -1.72
PTR3YFR029W MDR1P53258 950 aa4.3□□□□□ -1.72
PTR3YFR029W NOG2P53742 486 aaKnown RBP4.3□□□□□ -1.72
PTR3YFR029W SNZ1Q03148 297 aa4.3□□□□□ -1.72
PTR3YFR029W EFR3Q03653 782 aaKnown RBP4.3□□□□□ -1.72
PTR3YFR029W ROY1Q04847 553 aa4.3□□□□□ -1.72
PTR3YFR029W HUA2Q12134 243 aa4.3□□□□□ -1.72
PTR3YFR029W YRM1Q12340 786 aa4.3□□□□□ -1.72
PTR3YFR029W CAR2P07991 424 aaKnown RBP4.29□□□□□ -1.72
PTR3YFR029W OCA4P25366 362 aa4.29□□□□□ -1.72
PTR3YFR029W YCR051WP25631 222 aa4.29□□□□□ -1.72
PTR3YFR029W DGR2P32330 852 aa4.29□□□□□ -1.72
PTR3YFR029W HMX1P32339 317 aa4.29□□□□□ -1.72
PTR3YFR029W FLC2P39719 783 aa4.29□□□□□ -1.72
PTR3YFR029W ARC1P46672 376 aaKnown RBP4.29□□□□□ -1.72
PTR3YFR029W MGR3Q04472 501 aa4.29□□□□□ -1.72
PTR3YFR029W CRR1Q05790 422 aa4.29□□□□□ -1.72
PTR3YFR029W VPS54Q12071 889 aa4.29□□□□□ -1.72
PTR3YFR029W HER1Q12276 1246 aa4.29□□□□□ -1.72
PTR3YFR029W GCD1P09032 578 aaPredicted RBP4.29□□□□□ -1.72
PTR3YFR029W CPR2P23285 205 aa4.29□□□□□ -1.72
PTR3YFR029W PHO84P25297 587 aaKnown RBP4.29□□□□□ -1.72
PTR3YFR029W PEP3P27801 918 aa4.29□□□□□ -1.72
PTR3YFR029W CRM1P30822 1084 aaKnown RBP4.29□□□□□ -1.72
PTR3YFR029W ARP2P32381 391 aaKnown RBP4.29□□□□□ -1.72
PTR3YFR029W RPC37P36121 282 aa4.29□□□□□ -1.72
PTR3YFR029W DAD2P36162 133 aa4.29□□□□□ -1.72
PTR3YFR029W THI2P38141 450 aa4.29□□□□□ -1.72
PTR3YFR029W ATG14P38270 344 aa4.29□□□□□ -1.72
PTR3YFR029W RFC3P38629 340 aa4.29□□□□□ -1.72
PTR3YFR029W GIP2P40036 548 aa4.29□□□□□ -1.72
PTR3YFR029W LRO1P40345 661 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms