RNA–Protein interactions for RNA: YDR398W

UTP5, Transcript of Subunit of U3-containing Small Subunit (SSU) processome complex, yeast

Gene UTP5, Length 1,932 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP5	YDR398W	KGD2	P19262	463 aa	Predicted RBP	4.18	□□□□□ -1.74
UTP5	YDR398W	FRD1	P32614	470 aa	Known RBP	4.18	□□□□□ -1.74
UTP5	YDR398W	STT3	P39007	718 aa	Known RBP	4.18	□□□□□ -1.74
UTP5	YDR398W	VPS8	P39702	1274 aa		4.18	□□□□□ -1.74
UTP5	YDR398W	QRI7	P43122	407 aa		4.18	□□□□□ -1.74
UTP5	YDR398W	HRD3	Q05787	833 aa		4.18	□□□□□ -1.74
UTP5	YDR398W	BRE1	Q07457	700 aa	Known RBP	4.18	□□□□□ -1.74
UTP5	YDR398W	AIM6	Q07716	390 aa		4.18	□□□□□ -1.74
UTP5	YDR398W	FRE7	Q12333	620 aa		4.18	□□□□□ -1.74
UTP5	YDR398W	Q0010	Q9ZZX9	128 aa		4.18	□□□□□ -1.74
UTP5	YDR398W	XBP1	P40489	647 aa		4.17	□□□□□ -1.74
UTP5	YDR398W	BPL1	P48445	690 aa	Predicted RBP	4.17	□□□□□ -1.74
UTP5	YDR398W	ESF2	P53743	316 aa	Known RBP	4.17	□□□□□ -1.74
UTP5	YDR398W	YDL242W	Q07746	117 aa		4.17	□□□□□ -1.74
UTP5	YDR398W	SIR1	P21691	654 aa		4.17	□□□□□ -1.74
UTP5	YDR398W	RRP43	P25359	394 aa	Predicted RBP	4.17	□□□□□ -1.74
UTP5	YDR398W	PTP2	P29461	750 aa		4.17	□□□□□ -1.74
UTP5	YDR398W	BEM3	P32873	1128 aa		4.17	□□□□□ -1.74
UTP5	YDR398W	EIS1	Q05050	843 aa	Known RBP	4.17	□□□□□ -1.74
UTP5	YDR398W	YLR111W	Q12528	110 aa		4.17	□□□□□ -1.74
UTP5	YDR398W	MSS18	P08593	268 aa		4.16	□□□□□ -1.74
UTP5	YDR398W	ULP2	P40537	1034 aa	Predicted RBP	4.16	□□□□□ -1.74
UTP5	YDR398W	HIS6	P40545	261 aa		4.16	□□□□□ -1.74
UTP5	YDR398W	PLM2	Q04383	521 aa		4.16	□□□□□ -1.74
UTP5	YDR398W	BI2	P03873	423 aa		4.15	□□□□□ -1.74
UTP5	YDR398W	APM3	P38153	483 aa		4.15	□□□□□ -1.74
UTP5	YDR398W	CIR1	P42940	261 aa		4.15	□□□□□ -1.74
UTP5	YDR398W	NMD5	P46970	1048 aa		4.15	□□□□□ -1.74
UTP5	YDR398W	MOT3	P54785	490 aa	Known RBP	4.15	□□□□□ -1.74
UTP5	YDR398W	PIF1	P07271	859 aa		4.15	□□□□□ -1.75
UTP5	YDR398W	PTP1	P25044	335 aa		4.15	□□□□□ -1.75
UTP5	YDR398W	SAP1	P39955	897 aa	Known RBP	4.15	□□□□□ -1.75
UTP5	YDR398W	YML053C	Q04978	212 aa		4.15	□□□□□ -1.75
UTP5	YDR398W	YOL057W	Q08225	711 aa		4.15	□□□□□ -1.75
UTP5	YDR398W	AFT2	Q08957	416 aa		4.15	□□□□□ -1.75
UTP5	YDR398W	ICL2	Q12031	575 aa		4.15	□□□□□ -1.75
UTP5	YDR398W	NYV1	Q12255	253 aa		4.15	□□□□□ -1.75
UTP5	YDR398W	PNO1	Q99216	274 aa	Known RBP	4.15	□□□□□ -1.75
UTP5	YDR398W	SNO3	P43544	222 aa		4.14	□□□□□ -1.75
UTP5	YDR398W	NET1	P47035	1189 aa		4.14	□□□□□ -1.75
UTP5	YDR398W	RRP6	Q12149	733 aa	Known RBP	4.14	□□□□□ -1.75
UTP5	YDR398W	POL3	P15436	1097 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	YEF3	P16521	1044 aa	Known RBP	4.13	□□□□□ -1.75
UTP5	YDR398W	PDE1	P22434	369 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	KES1	P35844	434 aa	Known RBP	4.13	□□□□□ -1.75
UTP5	YDR398W	CAB2	P40506	365 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	PSA1	P41940	361 aa	Known RBP	4.13	□□□□□ -1.75
UTP5	YDR398W	YNL058C	P53947	316 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	AAT1	Q01802	451 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	YPL071C	Q02864	156 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	TPO3	Q06451	622 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	IWR1	Q07532	353 aa	Predicted RBP	4.13	□□□□□ -1.75
UTP5	YDR398W	YBR255C-A	Q3E776	120 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	URE2	P23202	354 aa	Known RBP	4.13	□□□□□ -1.75
UTP5	YDR398W	RIT1	P23796	513 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	CPR6	P53691	371 aa	Known RBP	4.13	□□□□□ -1.75
UTP5	YDR398W	RSC9	Q03124	581 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	HIM1	Q06674	414 aa		4.13	□□□□□ -1.75
UTP5	YDR398W	RTC1	Q08281	1341 aa		4.12	□□□□□ -1.75
UTP5	YDR398W	SES1	P07284	462 aa	Known RBP	4.12	□□□□□ -1.75
UTP5	YDR398W	MCM3	P24279	971 aa	Known RBP	4.12	□□□□□ -1.75
UTP5	YDR398W	RPF2	P36160	344 aa	Known RBP	4.12	□□□□□ -1.75
UTP5	YDR398W	FTH1	P38310	465 aa		4.12	□□□□□ -1.75
UTP5	YDR398W	ERC1	P38767	581 aa		4.12	□□□□□ -1.75
UTP5	YDR398W	SPC72	P39723	622 aa		4.12	□□□□□ -1.75
UTP5	YDR398W	ERG13	P54839	491 aa	Known RBP	4.12	□□□□□ -1.75
UTP5	YDR398W	YPL108W	Q02872	168 aa	Predicted RBP	4.12	□□□□□ -1.75
UTP5	YDR398W	ARA2	Q04212	335 aa		4.12	□□□□□ -1.75
UTP5	YDR398W	RAD34	Q06665	692 aa		4.12	□□□□□ -1.75
UTP5	YDR398W	YPL191C	Q08930	360 aa		4.12	□□□□□ -1.75
UTP5	YDR398W	PRS5	Q12265	496 aa	Known RBP	4.12	□□□□□ -1.75
UTP5	YDR398W	CET1	O13297	549 aa	Predicted RBP	4.11	□□□□□ -1.75
UTP5	YDR398W	ADE3	P07245	946 aa	Known RBP	4.11	□□□□□ -1.75
UTP5	YDR398W	MAK32	P23060	363 aa		4.11	□□□□□ -1.75
UTP5	YDR398W	MSH1	P25846	959 aa		4.11	□□□□□ -1.75
UTP5	YDR398W	YHL041W	P38730	149 aa		4.11	□□□□□ -1.75
UTP5	YDR398W	NOP2	P40991	618 aa	Known RBP	4.11	□□□□□ -1.75
UTP5	YDR398W	IDP3	P53982	420 aa	Known RBP	4.11	□□□□□ -1.75
UTP5	YDR398W	SWI4	P25302	1093 aa	Known RBP	4.11	□□□□□ -1.75
UTP5	YDR398W	SWC3	P31376	625 aa		4.11	□□□□□ -1.75
UTP5	YDR398W	SIP1	P32578	815 aa		4.11	□□□□□ -1.75
UTP5	YDR398W	VBA2	P38358	474 aa	Known RBP	4.11	□□□□□ -1.75
UTP5	YDR398W	VPS27	P40343	622 aa	Known RBP	4.11	□□□□□ -1.75
UTP5	YDR398W	IMA1	P53051	589 aa		4.11	□□□□□ -1.75
UTP5	YDR398W	ATG21	Q02887	496 aa		4.11	□□□□□ -1.75
UTP5	YDR398W	LYS21	Q12122	440 aa	Known RBP	4.11	□□□□□ -1.75
UTP5	YDR398W	MIS1	P09440	975 aa	Known RBP	4.1	□□□□□ -1.75
UTP5	YDR398W	BIK1	P11709	440 aa		4.1	□□□□□ -1.75
UTP5	YDR398W	IMD2	P38697	523 aa	Known RBP	4.1	□□□□□ -1.75
UTP5	YDR398W	IMD3	P50095	523 aa	Known RBP	4.1	□□□□□ -1.75
UTP5	YDR398W	PAP2	P53632	584 aa	Known RBP	4.1	□□□□□ -1.75
UTP5	YDR398W	YAT1	P80235	687 aa		4.1	□□□□□ -1.75
UTP5	YDR398W	STP1	Q00947	519 aa		4.1	□□□□□ -1.75
UTP5	YDR398W	NPA3	P47122	385 aa		4.09	□□□□□ -1.75
UTP5	YDR398W	SEC18	P18759	758 aa	Known RBP	4.09	□□□□□ -1.76
UTP5	YDR398W	CIN1	P40987	1014 aa		4.09	□□□□□ -1.76
UTP5	YDR398W	IRC7	P43623	340 aa		4.09	□□□□□ -1.76
UTP5	YDR398W	GLO1	P50107	326 aa		4.09	□□□□□ -1.76
UTP5	YDR398W	TAM41	P53230	385 aa		4.09	□□□□□ -1.76
UTP5	YDR398W	SNU56	Q03782	492 aa	Known RBP	4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms