RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W CBP6P07253 162 aaPredicted RBP2.55□□□□□ -2
SWR1YDR334W SEC53P07283 254 aaKnown RBP2.55□□□□□ -2
SWR1YDR334W SPS1P08458 490 aa2.55□□□□□ -2
SWR1YDR334W TOP3P13099 656 aa2.55□□□□□ -2
SWR1YDR334W STE4P18851 423 aa2.55□□□□□ -2
SWR1YDR334W ACO1P19414 778 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
SWR1YDR334W FRD1P32614 470 aaKnown RBP2.55□□□□□ -2
SWR1YDR334W ARA1P38115 344 aa2.55□□□□□ -2
SWR1YDR334W EFM2P38347 419 aa2.55□□□□□ -2
SWR1YDR334W RCY1P39531 840 aa2.55□□□□□ -2
SWR1YDR334W SSO2P39926 295 aa2.55□□□□□ -2
SWR1YDR334W LAS21P40367 830 aa2.55□□□□□ -2
SWR1YDR334W YJL132WP47014 750 aa2.55□□□□□ -2
SWR1YDR334W YGR149WP48236 432 aa2.55□□□□□ -2
SWR1YDR334W YGL039WP53183 348 aaKnown RBP2.55□□□□□ -2
SWR1YDR334W CUL3P53202 744 aa2.55□□□□□ -2
SWR1YDR334W PXR1P53335 271 aaPredicted RBP2.55□□□□□ -2
SWR1YDR334W YNR014WP53719 212 aa2.55□□□□□ -2
SWR1YDR334W RPT6Q01939 405 aaKnown RBP2.55□□□□□ -2
SWR1YDR334W NSE5Q03718 556 aa2.55□□□□□ -2
SWR1YDR334W YDR132CQ03900 495 aa2.55□□□□□ -2
SWR1YDR334W PDS5Q04264 1277 aa2.55□□□□□ -2
SWR1YDR334W FCF2Q12035 217 aaPredicted RBP2.55□□□□□ -2
SWR1YDR334W ATG29Q12092 213 aa2.55□□□□□ -2
SWR1YDR334W RRP6Q12149 733 aaKnown RBP2.55□□□□□ -2
SWR1YDR334W GPR1Q12361 961 aa2.55□□□□□ -2
SWR1YDR334W RAD6P06104 172 aa2.55□□□□□ -2
SWR1YDR334W RAD3P06839 778 aa2.55□□□□□ -2
SWR1YDR334W VAS1P07806 1104 aaKnown RBP2.55□□□□□ -2
SWR1YDR334W CDC15P27636 974 aa2.55□□□□□ -2
SWR1YDR334W PAP1P29468 568 aaKnown RBP2.55□□□□□ -2
SWR1YDR334W YKU70P32807 602 aa2.55□□□□□ -2
SWR1YDR334W ERT1P38140 529 aa2.55□□□□□ -2
SWR1YDR334W RFC1P38630 861 aaKnown RBP2.55□□□□□ -2
SWR1YDR334W STN1P38960 494 aa2.55□□□□□ -2
SWR1YDR334W LCP5P40079 357 aaPredicted RBP2.55□□□□□ -2
SWR1YDR334W MND2P40577 368 aa2.55□□□□□ -2
SWR1YDR334W NHX1Q04121 633 aa2.55□□□□□ -2
SWR1YDR334W ATG17Q06410 417 aa2.55□□□□□ -2
SWR1YDR334W YLL007CQ07799 665 aa2.55□□□□□ -2
SWR1YDR334W RPN8Q08723 338 aaKnown RBP2.55□□□□□ -2
SWR1YDR334W TMA17Q12513 150 aa2.55□□□□□ -2
SWR1YDR334W LSO2Q3E772 92 aaKnown RBP2.55□□□□□ -2
SWR1YDR334W PWP1P21304 576 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W ADP1P25371 1049 aa2.54□□□□□ -2
SWR1YDR334W FEN2P25621 512 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W URA1P28272 314 aaPredicted RBP2.54□□□□□ -2
SWR1YDR334W STE14P32584 239 aa2.54□□□□□ -2
SWR1YDR334W SWI3P32591 825 aa2.54□□□□□ -2
SWR1YDR334W RAD5P32849 1169 aaPredicted RBP2.54□□□□□ -2
SWR1YDR334W NFU1P32860 256 aa2.54□□□□□ -2
SWR1YDR334W ABZ1P37254 787 aaPredicted RBP2.54□□□□□ -2
SWR1YDR334W AIM21P40563 679 aa2.54□□□□□ -2
SWR1YDR334W SBE2P42223 864 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W ECL1P48235 211 aa2.54□□□□□ -2
SWR1YDR334W YGR237CP50089 785 aa2.54□□□□□ -2
SWR1YDR334W RAI1P53063 387 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W IST1P53843 298 aaPredicted RBP2.54□□□□□ -2
SWR1YDR334W MZM1Q03429 123 aaPredicted RBP2.54□□□□□ -2
SWR1YDR334W FIN1Q03898 291 aa2.54□□□□□ -2
SWR1YDR334W YMR226CQ05016 267 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W HCR1Q05775 265 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W MET7Q08645 548 aa2.54□□□□□ -2
SWR1YDR334W SRN2Q99176 213 aa2.54□□□□□ -2
SWR1YDR334W FLO1P32768 1537 aa2.54□□□□□ -2
SWR1YDR334W CDC9P04819 755 aa2.54□□□□□ -2
SWR1YDR334W DED1P06634 604 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W CDC6P09119 513 aa2.54□□□□□ -2
SWR1YDR334W PUP3P25451 205 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W SMY1P32364 656 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W TYE7P33122 291 aaPredicted RBP2.54□□□□□ -2
SWR1YDR334W MOT2P34909 587 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W KES1P35844 434 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W MIP6P38760 659 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W SLN1P39928 1220 aaPredicted RBP2.54□□□□□ -2
SWR1YDR334W NPP2P39997 493 aa2.54□□□□□ -2
SWR1YDR334W SDP1P40479 209 aa2.54□□□□□ -2
SWR1YDR334W EPL1P43572 832 aa2.54□□□□□ -2
SWR1YDR334W SNO2P53823 222 aa2.54□□□□□ -2
SWR1YDR334W TIM11P81449 96 aaPredicted RBP2.54□□□□□ -2
SWR1YDR334W YKR011CQ02209 353 aa2.54□□□□□ -2
SWR1YDR334W SVS1Q12254 260 aa2.54□□□□□ -2
SWR1YDR334W SCM3Q12334 223 aa2.54□□□□□ -2
SWR1YDR334W SPO16P17122 198 aa2.54□□□□□ -2
SWR1YDR334W SRP54P20424 541 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W MIH1P23748 554 aa2.54□□□□□ -2
SWR1YDR334W MSH1P25846 959 aa2.54□□□□□ -2
SWR1YDR334W KRE2P27809 442 aa2.54□□□□□ -2
SWR1YDR334W VPH1P32563 840 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W NUF2P33895 451 aa2.54□□□□□ -2
SWR1YDR334W MIA40P36046 403 aa2.54□□□□□ -2
SWR1YDR334W YRO2P38079 344 aa2.54□□□□□ -2
SWR1YDR334W LSM12P38828 187 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W YJL206CP39529 758 aa2.54□□□□□ -2
SWR1YDR334W VPS8P39702 1274 aa2.54□□□□□ -2
SWR1YDR334W RLP7P40693 322 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W YRB1P41920 201 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W COP1P53622 1201 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W SLM2P53955 656 aa2.54□□□□□ -2
SWR1YDR334W SLX4Q12098 748 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms