RNA–Protein interactions for RNA: YDR229W

IVY1, Transcript of Phospholipid-binding protein that interacts with both Ypt7p and Vps33p, yeast

Gene IVY1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IVY1	YDR229W	MCD1	Q12158	566 aa		6.6	□□□□□ -1.35
IVY1	YDR229W	HRT3	Q12347	344 aa		6.6	□□□□□ -1.35
IVY1	YDR229W	PDH1	Q12428	516 aa	Known RBP	6.6	□□□□□ -1.35
IVY1	YDR229W	MEX67	Q99257	599 aa	Known RBP	6.6	□□□□□ -1.35
IVY1	YDR229W	TPK1	P06244	397 aa		6.59	□□□□□ -1.35
IVY1	YDR229W	FUS1	P11710	512 aa		6.59	□□□□□ -1.35
IVY1	YDR229W	KAR3	P17119	729 aa		6.59	□□□□□ -1.35
IVY1	YDR229W	RDS1	P25611	832 aa		6.59	□□□□□ -1.35
IVY1	YDR229W	PLC1	P32383	869 aa		6.59	□□□□□ -1.35
IVY1	YDR229W	SIF2	P38262	535 aa		6.59	□□□□□ -1.35
IVY1	YDR229W	SPT8	P38915	602 aa		6.59	□□□□□ -1.35
IVY1	YDR229W	CCT4	P39078	528 aa	Known RBP	6.59	□□□□□ -1.35
IVY1	YDR229W	VPS25	P47142	202 aa		6.59	□□□□□ -1.35
IVY1	YDR229W	HSV2	P50079	448 aa	Predicted RBP	6.59	□□□□□ -1.35
IVY1	YDR229W	PSP1	P50896	841 aa	Known RBP	6.59	□□□□□ -1.35
IVY1	YDR229W	EAF1	Q06337	982 aa		6.59	□□□□□ -1.35
IVY1	YDR229W	STF1	P01098	86 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	RPO26	P20435	155 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	SIR1	P21691	654 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	BMH1	P29311	267 aa	Known RBP	6.58	□□□□□ -1.36
IVY1	YDR229W	DBF20	P32328	564 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	PUP2	P32379	260 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	DPH5	P32469	300 aa	Predicted RBP	6.58	□□□□□ -1.36
IVY1	YDR229W	YEL043W	P32618	956 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	ECM32	P32644	1121 aa	Known RBP	6.58	□□□□□ -1.36
IVY1	YDR229W	MUD2	P36084	527 aa	Known RBP	6.58	□□□□□ -1.36
IVY1	YDR229W	AGP2	P38090	596 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	HXT8	P40886	569 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	APT1	P49435	187 aa	Known RBP	6.58	□□□□□ -1.36
IVY1	YDR229W	UTP8	P53276	713 aa	Known RBP	6.58	□□□□□ -1.36
IVY1	YDR229W	CDC55	Q00362	526 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	HER2	Q03557	464 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	YMR111C	Q04461	462 aa	Predicted RBP	6.58	□□□□□ -1.36
IVY1	YDR229W	TMN2	Q04562	672 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	TCO89	Q08921	799 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	YDR056C	Q12025	205 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	TAF10	Q12030	206 aa		6.58	□□□□□ -1.36
IVY1	YDR229W	RUD3	Q12234	484 aa	Known RBP	6.58	□□□□□ -1.36
IVY1	YDR229W	GPA1	P08539	472 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	RPL40A	P0CH08	128 aa	Known RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	RPL40B	P0CH09	128 aa	Known RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	HOM2	P13663	365 aa	Known RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	FUR1	P18562	216 aa	Known RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	MRPS28	P21771	286 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	VMA3	P25515	160 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	HSP78	P33416	811 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.57	□□□□□ -1.36	not detected
IVY1	YDR229W	YBR056W	P38081	501 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	MED6	P38782	295 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	DYS1	P38791	387 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	FAA3	P39002	694 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	FTR1	P40088	404 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	LCB2	P40970	561 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	GYP8	P43570	497 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	LSB3	P43603	459 aa	Known RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	BNA1	P47096	177 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	YPT11	P48559	417 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	YNR061C	P53747	219 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	SPO19	Q03029	223 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	WAR1	Q03631	944 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	YML053C	Q04978	212 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	DON1	Q05610	365 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	YSH1	Q06224	779 aa	Predicted RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	MLC2	Q06580	163 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	YPR172W	Q06608	200 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	OPY2	Q06810	360 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	APC5	Q08683	685 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	YPQ1	Q12010	308 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	MSB2	P32334	1306 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	MTF1	P14908	341 aa	Known RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	CDC15	P27636	974 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	GAC1	P28006	793 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	RAD16	P31244	790 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	YME2	P32843	850 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	NOP4	P37838	685 aa	Known RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	BAP2	P38084	609 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	OLA1	P38219	394 aa	Known RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	SHE3	P38272	425 aa	Known RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	REI1	P38344	393 aa	Predicted RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	FMO1	P38866	432 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	YER130C	P39959	443 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	BTT1	P40314	149 aa	Predicted RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	CCT8	P47079	568 aa	Known RBP	6.57	□□□□□ -1.36
IVY1	YDR229W	PRM6	Q04705	352 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	YDR286C	Q05530	114 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	RSC2	Q06488	889 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	ATG23	Q06671	453 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	MLH2	Q07980	695 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	GPM2	Q12008	311 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	APL4	Q12028	832 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	YPR027C	Q12079	277 aa		6.57	□□□□□ -1.36
IVY1	YDR229W	CHS1	P08004	1131 aa		6.56	□□□□□ -1.36
IVY1	YDR229W	GSY2	P27472	705 aa		6.56	□□□□□ -1.36
IVY1	YDR229W	KIP1	P28742	1111 aa		6.56	□□□□□ -1.36
IVY1	YDR229W	TKL2	P33315	681 aa		6.56	□□□□□ -1.36
IVY1	YDR229W	KDX1	P36005	433 aa		6.56	□□□□□ -1.36
IVY1	YDR229W	YKR051W	P36142	418 aa		6.56	□□□□□ -1.36
IVY1	YDR229W	NCL1	P38205	684 aa	Known RBP	6.56	□□□□□ -1.36
IVY1	YDR229W	NEM1	P38757	446 aa		6.56	□□□□□ -1.36
IVY1	YDR229W	ALT1	P52893	592 aa		6.56	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms