RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 P06330 118 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 H2al1nQ497L1 109 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Wipf2Q6PEV3 440 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Them7Q9DCP4 223 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Smim10l1A0A087WNQ7 89 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Gp9O88186 177 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Tex26Q0VB26 296 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 A930003A15RikQ3U552 87 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Q3UNZ8 350 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Ss18Q62280 418 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Pygo2Q80V76 405 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Hspb8Q9JK92 196 aa10.32□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Myo15aQ9QZZ4 3511 aa10.31□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Ighv1-64A0A075B5X3 117 aa10.31□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Trav9-2A0A075B647 113 aa10.31□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Trav9-4A0A0B4J1K2 113 aa10.31□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Cacng7P62956 275 aa10.31□□□□□ -0.76
Clcn3-204ENSMUST00000110301 P01791 123 aa10.31□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Tmem97Q8VD00 176 aa10.31□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Olfr745Q7TRL9 328 aa10.3□□□□□ -0.76
Clcn3-204ENSMUST00000110301 PpbpQ9EQI5 113 aa10.3□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Ighv1-52A0A0A6YXC3 117 aa10.3□□□□□ -0.76
Clcn3-204ENSMUST00000110301 MsmbO08540 113 aa10.3□□□□□ -0.76
Clcn3-204ENSMUST00000110301 P01739 132 aa10.3□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Rpl13aP19253 203 aaKnown RBP10.3□□□□□ -0.76
Clcn3-204ENSMUST00000110301 P01750 117 aa10.3□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Csn3P06796 181 aa10.3□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Timm10bQ9WV96 100 aa10.3□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Trav16d-dv11A0A075B617 117 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Ighv1-12A0A0A6YXJ9 117 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Gm16442D3YZG3 307 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Gm20458E9PXJ7 78 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Klk1b4P00757 256 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Rpl24Q8BP67 157 aaKnown RBP10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Iah1Q9DB29 249 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Dkk2Q9QYZ8 259 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Gm9513B3GLJ6 99 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 P01736 120 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 P01741 114 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Pxt1Q8K459 51 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Gm5941Q497P9 117 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 G0s2Q61585 103 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 RhohQ9D3G9 191 aa10.29□□□□□ -0.76
Clcn3-204ENSMUST00000110301 P01674 108 aa10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 4930447F04RikA2AFR2 126 aa10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Usp24B1AY13 2617 aaKnown RBP10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Gm17430F6RSK3 157 aa10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Phlda3Q9WV95 125 aa10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Gcn1E9PVA8 2671 aaKnown RBP10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Samd5Q3V1H9 173 aa10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Gm94Q3V2D2 93 aa10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Srsf1Q6PDM2 248 aaKnown RBP10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Olfr984Q8VFN1 314 aa10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Pgpep1Q9ESW8 209 aa10.28□□□□□ -0.76
Clcn3-204ENSMUST00000110301 Ighv1-50A0A075B5W1 117 aa10.27□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Dchs1E9PVD3 3291 aa10.27□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Gm10188Q3V432 135 aa10.27□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Ankrd17Q99NH0 2603 aaKnown RBP10.27□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Ighv2-7A0A075B5Q8 116 aa10.26□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Bsph2Q0Q236 131 aa10.26□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Srsf2Q62093 221 aaKnown RBP10.26□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Gm12689Q8BQU9 117 aa10.26□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Spink10Q8CAC8 162 aa10.26□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Gm26938S4R185 226 aa10.26□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Spink1P09036 80 aa10.26□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Synj2bpQ9D6K5 145 aa10.26□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Gm26920S4R2A5 56 aa10.26□□□□□ -0.77
Clcn3-204ENSMUST00000110301 NbeaQ9EPN1 2936 aa10.25□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Trav12d-3A0A075B6A4 115 aa10.25□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Smim20D3Z7Q2 69 aa10.25□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Hoxd3P09027 433 aa10.25□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Il1f10Q8R459 152 aa10.25□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Tmem101Q91VP7 257 aa10.25□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Foxi1Q922I5 372 aa10.25□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Mrpl20Q9CQL4 149 aa10.25□□□□□ -0.77
Clcn3-204ENSMUST00000110301 H2-DMb1P35737 261 aa10.25□□□□□ -0.77
Clcn3-204ENSMUST00000110301 PmvkQ9D1G2 192 aa10.25□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Trav14d-1A0A075B6B1 121 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 1500009C09RikD3YYW9 81 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 PerpQ9JK95 193 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Ighv12-3A0A075B5T1 117 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Ighv1-62-2A0A0A6YXZ4 119 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Gm11733Q8BQP1 125 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Cend1Q9JKC6 149 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Dscaml1Q4VA61 2053 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Rpl36-ps4A0A140T8U4 117 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Foxi3E0CZH3 425 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 P01786 117 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Ifi27l2aQ8R412 90 aa10.24□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Gm7257D3YX25 99 aa10.23□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Muc2Q80Z19 2680 aa10.23□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Gm867A0A1W2P7T4 151 aa10.23□□□□□ -0.77
Clcn3-204ENSMUST00000110301 9130213A22RikQ3V3T2 120 aa10.23□□□□□ -0.77
Clcn3-204ENSMUST00000110301 FlnaQ8BTM8 2647 aaKnown RBP10.23□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Trav14-3A0A075B607 120 aa10.23□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Ighv5-9-1A0A0A6YVS4 126 aa10.23□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Gm7489Q3UT34 171 aa10.23□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Spink12Q9D256 87 aa10.23□□□□□ -0.77
Clcn3-204ENSMUST00000110301 CrygbP04344 175 aa10.22□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Lcn2P11672 200 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms