RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Psmb2Q9R1P3 201 aa17.2■□□□□ 0.34
Cln6-201ENSMUST00000034776 Ighv12-3A0A075B5T1 117 aa17.19■□□□□ 0.34
Cln6-201ENSMUST00000034776 Igll1P20764 209 aa17.19■□□□□ 0.34
Cln6-201ENSMUST00000034776 Snrpd3P62320 126 aaKnown RBP17.19■□□□□ 0.34
Cln6-201ENSMUST00000034776 Gm5150Q1AN92 299 aa17.19■□□□□ 0.34
Cln6-201ENSMUST00000034776 Gm5148Q8BGG2 154 aa17.19■□□□□ 0.34
Cln6-201ENSMUST00000034776 PdfS4R2K0 231 aa17.19■□□□□ 0.34
Cln6-201ENSMUST00000034776 Tenm3Q9WTS6 2715 aa17.19■□□□□ 0.34
Cln6-201ENSMUST00000034776 C2cd3Q52KB6 2323 aa17.19■□□□□ 0.34
Cln6-201ENSMUST00000034776 Fhl2O70433 279 aa17.18■□□□□ 0.34
Cln6-201ENSMUST00000034776 Psmb8P28063 276 aa17.18■□□□□ 0.34
Cln6-201ENSMUST00000034776 H2-DMb2Q31099 261 aa17.18■□□□□ 0.34
Cln6-201ENSMUST00000034776 Mbd3l2Q3UXB0 228 aa17.18■□□□□ 0.34
Cln6-201ENSMUST00000034776 Rnf183Q8QZS5 190 aa17.18■□□□□ 0.34
Cln6-201ENSMUST00000034776 Igkv4-62A0A0G2JDW9 117 aa17.18■□□□□ 0.34
Cln6-201ENSMUST00000034776 Runx1Q03347 451 aa17.18■□□□□ 0.34
Cln6-201ENSMUST00000034776 Tex26Q0VB26 296 aa17.18■□□□□ 0.34
Cln6-201ENSMUST00000034776 Ndufb4Q9CQC7 129 aa17.18■□□□□ 0.34
Cln6-201ENSMUST00000034776 Gm5157A0A087WRH8 301 aa17.17■□□□□ 0.34
Cln6-201ENSMUST00000034776 Gpx7Q99LJ6 186 aa17.17■□□□□ 0.34
Cln6-201ENSMUST00000034776 Rif1Q6PR54 2419 aaKnown RBP17.17■□□□□ 0.34
Cln6-201ENSMUST00000034776 TshbP12656 138 aa17.17■□□□□ 0.34
Cln6-201ENSMUST00000034776 Defb26Q30KN7 186 aa17.17■□□□□ 0.34
Cln6-201ENSMUST00000034776 Fam216aQ9DB54 251 aa17.16■□□□□ 0.34
Cln6-201ENSMUST00000034776 Rnase1P00683 149 aa17.15■□□□□ 0.34
Cln6-201ENSMUST00000034776 Srp14P16254 110 aaKnown RBP17.15■□□□□ 0.34
Cln6-201ENSMUST00000034776 Ighv2-6A0A075B6A7 116 aa17.15■□□□□ 0.34
Cln6-201ENSMUST00000034776 Zfp867E9Q2M4 473 aa17.15■□□□□ 0.34
Cln6-201ENSMUST00000034776 P01747 120 aa17.15■□□□□ 0.34
Cln6-201ENSMUST00000034776 Chd6A3KFM7 2711 aa17.14■□□□□ 0.34
Cln6-201ENSMUST00000034776 Trav9-2A0A075B647 113 aa17.14■□□□□ 0.33
Cln6-201ENSMUST00000034776 Ighv5-9-1A0A0A6YVS4 126 aa17.14■□□□□ 0.33
Cln6-201ENSMUST00000034776 Trav9-4A0A0B4J1K2 113 aa17.14■□□□□ 0.33
Cln6-201ENSMUST00000034776 Mcrip2Q9CQB2 160 aaKnown RBP17.14■□□□□ 0.33
Cln6-201ENSMUST00000034776 Gm12888Q3UW77 119 aa17.14■□□□□ 0.33
Cln6-201ENSMUST00000034776 Map1lc3aQ91VR7 121 aa17.14■□□□□ 0.33
Cln6-201ENSMUST00000034776 Rabac1Q9Z0S9 185 aa17.14■□□□□ 0.33
Cln6-201ENSMUST00000034776 Erdr1J3QMM0 206 aa17.13■□□□□ 0.33
Cln6-201ENSMUST00000034776 Ighv1-63A0A075B5X2 117 aa17.12■□□□□ 0.33
Cln6-201ENSMUST00000034776 TctaQ8VEA7 122 aa17.12■□□□□ 0.33
Cln6-201ENSMUST00000034776 Olfr1367Q8VFG2 316 aa17.12■□□□□ 0.33
Cln6-201ENSMUST00000034776 Mrpl36Q99N90 102 aa17.12■□□□□ 0.33
Cln6-201ENSMUST00000034776 Tmem14cQ9CQN6 114 aa17.12■□□□□ 0.33
Cln6-201ENSMUST00000034776 Gkn1Q9CR36 201 aa17.12■□□□□ 0.33
Cln6-201ENSMUST00000034776 Fam213bQ9DB60 201 aa17.12■□□□□ 0.33
Cln6-201ENSMUST00000034776 P01736 120 aa17.12■□□□□ 0.33
Cln6-201ENSMUST00000034776 H2-DMb1P35737 261 aa17.12■□□□□ 0.33
Cln6-201ENSMUST00000034776 1810032O08RikE9PZV8 113 aa17.11■□□□□ 0.33
Cln6-201ENSMUST00000034776 S100a4P07091 101 aa17.11■□□□□ 0.33
Cln6-201ENSMUST00000034776 4930564D02RikQ9D4S4 103 aa17.11■□□□□ 0.33
Cln6-201ENSMUST00000034776 Tppp3Q9CRB6 176 aaKnown RBP17.11■□□□□ 0.33
Cln6-201ENSMUST00000034776 Lamtor2Q9JHS3 125 aa17.11■□□□□ 0.33
Cln6-201ENSMUST00000034776 Gm1968Q3T9I3 115 aa17.1■□□□□ 0.33
Cln6-201ENSMUST00000034776 Smim15Q3UTD9 74 aa17.1■□□□□ 0.33
Cln6-201ENSMUST00000034776 Aqp7O54794 303 aa17.09■□□□□ 0.33
Cln6-201ENSMUST00000034776 P06328 117 aa17.09■□□□□ 0.33
Cln6-201ENSMUST00000034776 Gm20458E9PXJ7 78 aa17.09■□□□□ 0.33
Cln6-201ENSMUST00000034776 Psmg4P0C7N9 123 aa17.09■□□□□ 0.33
Cln6-201ENSMUST00000034776 Q24JP4 165 aa17.09■□□□□ 0.33
Cln6-201ENSMUST00000034776 Rbfox3Q8BIF2 374 aa17.09■□□□□ 0.33
Cln6-201ENSMUST00000034776 Vmn1r216Q8R257 298 aa17.09■□□□□ 0.33
Cln6-201ENSMUST00000034776 Card19Q9D1I2 183 aa17.09■□□□□ 0.33
Cln6-201ENSMUST00000034776 Klf13Q9JJZ6 289 aa17.09■□□□□ 0.33
Cln6-201ENSMUST00000034776 Trav14-2A0A075B694 121 aa17.08■□□□□ 0.33
Cln6-201ENSMUST00000034776 Cphx2Q8BX39 182 aa17.08■□□□□ 0.33
Cln6-201ENSMUST00000034776 Ube2cQ9D1C1 179 aa17.08■□□□□ 0.33
Cln6-201ENSMUST00000034776 Chd9Q8BYH8 2885 aa17.08■□□□□ 0.32
Cln6-201ENSMUST00000034776 Trbv14A0A140T8L9 115 aa17.08■□□□□ 0.32
Cln6-201ENSMUST00000034776 MdfiP70331 251 aa17.08■□□□□ 0.32
Cln6-201ENSMUST00000034776 Il22ra1Q80XZ4 581 aa17.08■□□□□ 0.32
Cln6-201ENSMUST00000034776 Epg5Q80TA9 2572 aa17.07■□□□□ 0.32
Cln6-201ENSMUST00000034776 Ccl17F6R5P4 103 aa17.07■□□□□ 0.32
Cln6-201ENSMUST00000034776 Cdx4Q07424 282 aa17.07■□□□□ 0.32
Cln6-201ENSMUST00000034776 Trav16d-dv11A0A075B617 117 aa17.06■□□□□ 0.32
Cln6-201ENSMUST00000034776 Olfr869E9PX82 323 aa17.06■□□□□ 0.32
Cln6-201ENSMUST00000034776 Thy1P01831 162 aa17.06■□□□□ 0.32
Cln6-201ENSMUST00000034776 Atg101Q9D8Z6 218 aa17.06■□□□□ 0.32
Cln6-201ENSMUST00000034776 Xirp2Q4U4S6 3784 aa17.05■□□□□ 0.32
Cln6-201ENSMUST00000034776 Igkv4-74A0A0B4J1I3 119 aa17.05■□□□□ 0.32
Cln6-201ENSMUST00000034776 A0A1Y7VMQ4 148 aa17.05■□□□□ 0.32
Cln6-201ENSMUST00000034776 Lcn2P11672 200 aa17.05■□□□□ 0.32
Cln6-201ENSMUST00000034776 MtorQ9JLN9 2549 aa17.05■□□□□ 0.32
Cln6-201ENSMUST00000034776 Usp9yF8VPU6 2556 aa17.05■□□□□ 0.32
Cln6-201ENSMUST00000034776 Khdc1cQ4KL78 166 aa17.05■□□□□ 0.32
Cln6-201ENSMUST00000034776 Olfr322Q5NCC8 327 aa17.05■□□□□ 0.32
Cln6-201ENSMUST00000034776 Reg3gO09049 174 aa17.04■□□□□ 0.32
Cln6-201ENSMUST00000034776 Tmem136Q3TYE7 245 aa17.04■□□□□ 0.32
Cln6-201ENSMUST00000034776 Gphb5Q812B2 130 aa17.04■□□□□ 0.32
Cln6-201ENSMUST00000034776 AI854703Q8BIN3 203 aa17.04■□□□□ 0.32
Cln6-201ENSMUST00000034776 Uqcc3Q8K2T4 89 aa17.04■□□□□ 0.32
Cln6-201ENSMUST00000034776 Mapk1ip1lQ8BH93 242 aa17.03■□□□□ 0.32
Cln6-201ENSMUST00000034776 Cd99Q8VCN6 175 aa17.03■□□□□ 0.32
Cln6-201ENSMUST00000034776 Cend1Q9JKC6 149 aa17.03■□□□□ 0.32
Cln6-201ENSMUST00000034776 Tcrg-V4A0A0B4J1J8 138 aa17.03■□□□□ 0.32
Cln6-201ENSMUST00000034776 Avpi1Q9D7H4 142 aa17.03■□□□□ 0.32
Cln6-201ENSMUST00000034776 Ighv1-66A0A075B5X5 117 aa17.02■□□□□ 0.32
Cln6-201ENSMUST00000034776 Gm3443F7CCV5 94 aa17.02■□□□□ 0.32
Cln6-201ENSMUST00000034776 P06330 118 aa17.02■□□□□ 0.32
Cln6-201ENSMUST00000034776 Rnf152Q8BG47 203 aa17.02■□□□□ 0.32
Cln6-201ENSMUST00000034776 5930422O12RikQ8C4Y4 123 aa17.02■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 71.1 ms